RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Prpsap2Q8R574 369 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Polr3fQ921X6 316 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Ptdss1Q99LH2 473 aaKnown RBP13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Utp11Q9CZJ1 253 aaKnown RBP13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Kcnh7Q9ER47 1195 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Eif3eP60229 445 aaKnown RBP13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Klra6Q60653 266 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Dusp4Q8BFV3 398 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Dars2Q8BIP0 653 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Snrnp27Q8K194 155 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Nrbp2Q91V36 499 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Cd248Q91V98 765 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Rpn1Q91YQ5 608 aaKnown RBP13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Nudt5Q9JKX6 218 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Slit1Q80TR4 1531 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 B020011L13RikA0A087WQI7 412 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Lonrf1D3YY23 762 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Usp35M0QWN7 1009 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 MyocO70624 490 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Rab6bP61294 208 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 InscQ3HNM7 579 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 PapolaQ61183 739 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Dlg4Q62108 724 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Ntrk3Q6VNS1 825 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Tmc8Q7TN58 722 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 N4bp3Q8C7U1 537 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Fam20aQ8CID3 541 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Grk1Q9WVL4 564 aa13.37□□□□□ -0.27
Msh6-201ENSMUST00000005503 Fgf15O35622 218 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Rtkn2Q14B46 604 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Klhdc10Q6PAR0 439 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Atg4cQ811C2 458 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Phf20Q8BLG0 1010 aaKnown RBP13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Sumf1Q8R0F3 372 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Zscan4-ps3A0A1B0GRH6 506 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Zscan4-ps2A0A1C7CYU6 506 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Bpifb9bA2AJD1 591 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Rbp3P49194 1234 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Abi2P62484 446 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Micall2Q3TN34 1009 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Bpifb9aQ80XI7 591 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Unc5bQ8K1S3 945 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Ccdc97Q9DBT3 340 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 SmapQ9R0P4 181 aaKnown RBP13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Gm3460E9QAI8 215 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Nptx2O70340 429 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Pdk4O70571 412 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Fmr1P35922 614 aaKnown RBP13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Pdcd2P46718 343 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Gpc4P51655 557 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Bpifb5Q3UQ05 490 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 PRAG1Q571I4 1179 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Pla2g4cQ64GA5 597 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Onecut3Q8K557 490 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 WaslQ91YD9 501 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Dnaaf1Q9D2H9 634 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Ap2b1Q9DBG3 937 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Stx12Q9ER00 274 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Ybx3Q9JKB3 361 aaKnown RBP13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Tns2Q8CGB6 1400 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Speer4f2E9Q366 295 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Xbp1O35426 267 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Tlk2O55047 718 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Serpina1aP07758 413 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Pik3r1P26450 724 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Ccng1P51945 294 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Serpina1cQ00896 412 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Serpina1dQ00897 413 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Mettl17Q3U2U7 461 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Pip5kl1Q6U7H8 395 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Ano5Q75UR0 904 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Fam102aQ78T81 392 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Gbp5Q8CFB4 590 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Wrap53Q8VC51 532 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Pglyrp2Q8VCS0 530 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Anapc4Q91W96 807 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Xpo7Q9EPK7 1087 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Plagl1Q9JLQ4 704 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Homer2Q9QWW1 354 aa13.36□□□□□ -0.27
Msh6-201ENSMUST00000005503 Pitpnm2Q6ZPQ6 1335 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 SarsP26638 512 aaKnown RBP13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Trim71Q1PSW8 855 aaKnown RBP13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Skap1Q3UUV5 355 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Znf879Q8BI99 563 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Klhl38Q8BSF5 581 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Dync1li1Q8R1Q8 523 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Lrrc42Q8R2U7 421 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Gpsm2Q8VDU0 679 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Usp29Q9ES63 869 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Ing2Q9ESK4 281 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Tll2Q9WVM6 1012 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Cdr2lA2A6T1 465 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 HnrnpdQ60668 355 aaKnown RBP13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Stip1Q60864 543 aaKnown RBP13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Serpinb3dQ6UKZ0 387 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Ttc39bQ8BYY4 617 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Usp20Q8C6M1 916 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Depdc1aQ8CIG0 804 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Pkn3Q8K045 878 aa13.35□□□□□ -0.27
Msh6-201ENSMUST00000005503 Xpo5Q924C1 1204 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms