RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	UFD1	P53044	361 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	WSC2	P53832	503 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	UPS1	Q05776	175 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	MDM36	Q06820	579 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	YDL009C	Q12210	107 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	REP2	P03872	296 aa		6.72	□□□□□ -1.33
TGA1	tA(UGC)A	CHO1	P08456	276 aa		6.72	□□□□□ -1.33
TGA1	tA(UGC)A	RPL24B	P24000	155 aa	Known RBP	6.72	□□□□□ -1.33
TGA1	tA(UGC)A	TMA19	P35691	167 aa	Known RBP	6.72	□□□□□ -1.33
TGA1	tA(UGC)A	DUG3	P53871	357 aa		6.72	□□□□□ -1.33
TGA1	tA(UGC)A	SPO19	Q03029	223 aa		6.72	□□□□□ -1.33
TGA1	tA(UGC)A	YLR283W	Q05867	314 aa		6.72	□□□□□ -1.33
TGA1	tA(UGC)A	RPS31	P05759	152 aa	Known RBP	6.71	□□□□□ -1.34
TGA1	tA(UGC)A	MRPS28	P21771	286 aa		6.71	□□□□□ -1.34
TGA1	tA(UGC)A	ACH1	P32316	526 aa		6.71	□□□□□ -1.34
TGA1	tA(UGC)A	YKL063C	P35725	167 aa		6.71	□□□□□ -1.34
TGA1	tA(UGC)A	SWD2	P36104	329 aa	Predicted RBP	6.71	□□□□□ -1.34
TGA1	tA(UGC)A	PRS2	P38620	318 aa	Known RBP	6.71	□□□□□ -1.34
TGA1	tA(UGC)A	CCS1	P40202	249 aa	Known RBP	6.71	□□□□□ -1.34
TGA1	tA(UGC)A	SYS1	P41544	203 aa		6.71	□□□□□ -1.34
TGA1	tA(UGC)A	GPI14	P47088	403 aa	Known RBP	6.71	□□□□□ -1.34
TGA1	tA(UGC)A	BXI1	P48558	297 aa		6.71	□□□□□ -1.34
TGA1	tA(UGC)A	RBL2	P48606	106 aa	Known RBP	6.71	□□□□□ -1.34
TGA1	tA(UGC)A	FMP48	P53233	369 aa		6.71	□□□□□ -1.34
TGA1	tA(UGC)A	CPR8	P53728	308 aa		6.71	□□□□□ -1.34
TGA1	tA(UGC)A	ARG5,6	Q01217	863 aa		6.71	□□□□□ -1.34
TGA1	tA(UGC)A	ATG17	Q06410	417 aa		6.71	□□□□□ -1.34
TGA1	tA(UGC)A	IRC25	Q07951	179 aa		6.71	□□□□□ -1.34
TGA1	tA(UGC)A	RPL25	P04456	142 aa	Known RBP	6.7	□□□□□ -1.34
TGA1	tA(UGC)A	RPS18A	P0CX55	146 aa	Known RBP	6.7	□□□□□ -1.34
TGA1	tA(UGC)A	RPS18B	P0CX56	146 aa	Predicted RBP	6.7	□□□□□ -1.34
TGA1	tA(UGC)A	PET122	P10355	254 aa		6.7	□□□□□ -1.34
TGA1	tA(UGC)A	ISC10	P32645	267 aa		6.7	□□□□□ -1.34
TGA1	tA(UGC)A	PIC2	P40035	300 aa		6.7	□□□□□ -1.34
TGA1	tA(UGC)A	IES5	P40060	125 aa		6.7	□□□□□ -1.34
TGA1	tA(UGC)A	YIL060W	P40519	144 aa		6.7	□□□□□ -1.34
TGA1	tA(UGC)A	YFL015C	P43578	164 aa		6.7	□□□□□ -1.34
TGA1	tA(UGC)A	MRH4	P53166	561 aa		6.7	□□□□□ -1.34
TGA1	tA(UGC)A	ECM18	Q04623	453 aa		6.7	□□□□□ -1.34
TGA1	tA(UGC)A	ADH6	Q04894	360 aa	Known RBP	6.7	□□□□□ -1.34
TGA1	tA(UGC)A	TMA10	Q06177	86 aa		6.7	□□□□□ -1.34
TGA1	tA(UGC)A	AIR2	Q12476	344 aa	Known RBP	6.7	□□□□□ -1.34
TGA1	tA(UGC)A	ATG22	P25568	528 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	VAM7	P32912	316 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	CPR5	P35176	225 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	ATG18	P43601	500 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	RPS0B	P46654	252 aa	Known RBP	6.69	□□□□□ -1.34
TGA1	tA(UGC)A	SKP1	P52286	194 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	CTF19	Q02732	369 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	TDA1	Q03533	586 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	YMR130W	Q04223	302 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	FMP42	Q04991	504 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	LIP2	Q06005	328 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	GPN3	Q06543	272 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	INP53	Q12271	1107 aa		6.69	□□□□□ -1.34
TGA1	tA(UGC)A	GDH1	P07262	454 aa	Known RBP	6.68	□□□□□ -1.34
TGA1	tA(UGC)A	ATP10	P18496	279 aa		6.68	□□□□□ -1.34
TGA1	tA(UGC)A	YCR101C	P25607	182 aa		6.68	□□□□□ -1.34
TGA1	tA(UGC)A	SOR1	P35497	357 aa	Known RBP	6.68	□□□□□ -1.34
TGA1	tA(UGC)A	ADH5	P38113	351 aa	Known RBP	6.68	□□□□□ -1.34
TGA1	tA(UGC)A	HNT2	P49775	206 aa		6.68	□□□□□ -1.34
TGA1	tA(UGC)A	DIE2	P50076	525 aa		6.68	□□□□□ -1.34
TGA1	tA(UGC)A	VHT1	P53241	593 aa		6.68	□□□□□ -1.34
TGA1	tA(UGC)A	HNT1	Q04344	158 aa	Known RBP	6.68	□□□□□ -1.34
TGA1	tA(UGC)A	SOR2	Q07786	357 aa		6.68	□□□□□ -1.34
TGA1	tA(UGC)A	RFM1	Q12192	310 aa		6.68	□□□□□ -1.34
TGA1	tA(UGC)A	WHI5	Q12416	295 aa		6.68	□□□□□ -1.34
TGA1	tA(UGC)A	NKP1	Q12493	238 aa		6.68	□□□□□ -1.34
TGA1	tA(UGC)A	AAC1	P04710	309 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	RFA3	P26755	122 aa	Known RBP	6.67	□□□□□ -1.34
TGA1	tA(UGC)A	VMA5	P31412	392 aa	Known RBP	6.67	□□□□□ -1.34
TGA1	tA(UGC)A	HTD2	P38790	280 aa	Known RBP	6.67	□□□□□ -1.34
TGA1	tA(UGC)A	PRM5	P40476	318 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	GNA1	P43577	159 aa	Predicted RBP	6.67	□□□□□ -1.34
TGA1	tA(UGC)A	YGL114W	P53134	725 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	YGR054W	P53235	642 aa	Known RBP	6.67	□□□□□ -1.34
TGA1	tA(UGC)A	OKP1	P53298	406 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	RPL21A	Q02753	160 aa	Known RBP	6.67	□□□□□ -1.34
TGA1	tA(UGC)A	YMR166C	Q03829	368 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	KEI1	Q06346	221 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	ARR2	Q06597	130 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	ALG6	Q12001	544 aa	Known RBP	6.67	□□□□□ -1.34
TGA1	tA(UGC)A	MSH5	Q12175	901 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	VAM3	Q12241	283 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	BBP1	Q12365	385 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	RPL21B	Q12672	160 aa	Known RBP	6.67	□□□□□ -1.34
TGA1	tA(UGC)A	ATG40	Q99325	256 aa		6.67	□□□□□ -1.34
TGA1	tA(UGC)A	MDN1	Q12019	4910 aa	Known RBP	6.66	□□□□□ -1.34
TGA1	tA(UGC)A	RFA1	P22336	621 aa	Known RBP	6.66	□□□□□ -1.34
TGA1	tA(UGC)A	PRE4	P30657	266 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	OCH1	P31755	480 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	TCA17	P32613	152 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	EDS1	P38073	919 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	SWD3	P38123	315 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	MBA1	P38300	278 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	PAC2	P39937	518 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	JLP2	P40206	208 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	OTU1	P43558	301 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	HSK3	P69852	69 aa		6.66	□□□□□ -1.34
TGA1	tA(UGC)A	YPL108W	Q02872	168 aa	Predicted RBP	6.66	□□□□□ -1.34

Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms