RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	CDS1	P38221	457 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	ERV15	P38312	142 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	YNL208W	P40159	199 aa	Known RBP	6.11	□□□□□ -1.43
SNT309	YPR101W	YFR054C	P43622	192 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	YJR056C	P47115	236 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	MNN10	P50108	393 aa	Known RBP	6.11	□□□□□ -1.43
SNT309	YPR101W	SKP1	P52286	194 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	TIM21	P53220	239 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	ALG9	P53868	555 aa	Known RBP	6.11	□□□□□ -1.43
SNT309	YPR101W	GPI15	P53961	229 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	YLR030W	Q07967	263 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	MCH4	Q08268	501 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	YPL272C	Q08984	517 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	REX3	Q12090	404 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	YPR145C-A	Q2V2P0	78 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	TAO3	P40468	2376 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	FAB1	P34756	2278 aa		6.11	□□□□□ -1.43
SNT309	YPR101W	GAL1	P04385	528 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	MCM1	P11746	286 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	RFA1	P22336	621 aa	Known RBP	6.1	□□□□□ -1.43
SNT309	YPR101W	MIR1	P23641	311 aa	Known RBP	6.1	□□□□□ -1.43
SNT309	YPR101W	CLB6	P32943	380 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	SRX1	P36077	127 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	MRPL4	P36517	319 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	APD1	P38281	316 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	WSC4	P38739	605 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	YEA6	P39953	335 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	YIL152W	P40455	235 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	GPP1	P41277	250 aa	Known RBP	6.1	□□□□□ -1.43
SNT309	YPR101W	CUZ1	P53899	274 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	RNH201	P53942	307 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	NRG1	Q03125	231 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	YMR265C	Q03508	461 aa	Known RBP	6.1	□□□□□ -1.43
SNT309	YPR101W	YMR210W	Q03649	449 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	YPR147C	Q06522	304 aa	Known RBP	6.1	□□□□□ -1.43
SNT309	YPR101W	HNT3	Q08702	217 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	ERP4	Q12450	207 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	UBA3	Q99344	299 aa		6.1	□□□□□ -1.43
SNT309	YPR101W	ADH3	P07246	375 aa	Known RBP	6.09	□□□□□ -1.43
SNT309	YPR101W	IMG1	P25626	169 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	FAA1	P30624	700 aa	Known RBP	6.09	□□□□□ -1.43
SNT309	YPR101W	AFG1	P32317	509 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	YBL010C	P32788	280 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	EMP70	P32802	667 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	IMD2	P38697	523 aa	Known RBP	6.09	□□□□□ -1.43
SNT309	YPR101W	YEA4	P40004	342 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	VMA21	P41806	77 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	CIS3	P47001	227 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	DAN1	P47178	298 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	PMT3	P47190	753 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	YNR014W	P53719	212 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	TMA23	Q03525	211 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	THI74	Q04083	370 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	YMR253C	Q04835	414 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	AIM45	Q12480	344 aa	Known RBP	6.09	□□□□□ -1.43
SNT309	YPR101W	TAD3	Q9URQ3	322 aa		6.09	□□□□□ -1.43
SNT309	YPR101W	YMR084W	A2P2R3	262 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	YFR010W-A	P0C5N0	62 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	OLE1	P21147	510 aa	Known RBP	6.08	□□□□□ -1.44
SNT309	YPR101W	EHD3	P28817	500 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	SDH4	P37298	181 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	RIB5	P38145	238 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	SEN34	P39707	275 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	XBP1	P40489	647 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	IRC24	P40580	263 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	SPG5	P42933	373 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	PUS4	P48567	403 aa	Known RBP	6.08	□□□□□ -1.44
SNT309	YPR101W	FYV6	P53913	173 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
SNT309	YPR101W	SRP1	Q02821	542 aa	Known RBP	6.08	□□□□□ -1.44
SNT309	YPR101W	ASM4	Q05166	528 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	CRR1	Q05790	422 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	STP3	Q05937	343 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	BNA5	Q05979	453 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	YDL086W	Q07505	273 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	MED4	Q12343	284 aa		6.08	□□□□□ -1.44
SNT309	YPR101W	ARF1	P11076	181 aa	Known RBP	6.07	□□□□□ -1.44
SNT309	YPR101W	GLK1	P17709	500 aa	Known RBP	6.07	□□□□□ -1.44
SNT309	YPR101W	SEC59	P20048	519 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	SCO1	P23833	295 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	MRPL15	P36523	253 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	FAT1	P38225	669 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	YBR292C	P38357	123 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	TOK1	P40310	691 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	YIL086C	P40503	102 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	PAU15	P40585	124 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	YJR011C	P47086	261 aa	Predicted RBP	6.07	□□□□□ -1.44
SNT309	YPR101W	ASK10	P48361	1146 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	HSV2	P50079	448 aa	Predicted RBP	6.07	□□□□□ -1.44
SNT309	YPR101W	LCL3	P53153	274 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	NIS1	P53939	407 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	VPS28	Q02767	242 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	SEI1	Q06058	285 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	YRA1	Q12159	226 aa	Known RBP	6.07	□□□□□ -1.44
SNT309	YPR101W	HMS1	Q12398	434 aa		6.07	□□□□□ -1.44
SNT309	YPR101W	PAR32	Q12515	295 aa	Known RBP	6.07	□□□□□ -1.44
SNT309	YPR101W	RPB3	P16370	318 aa	Known RBP	6.06	□□□□□ -1.44
SNT309	YPR101W	HSP150	P32478	413 aa		6.06	□□□□□ -1.44
SNT309	YPR101W	AGA2	P32781	87 aa		6.06	□□□□□ -1.44
SNT309	YPR101W	YBR197C	P38306	217 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms