RNA–Protein interactions for RNA: YPR040W

TIP41, Transcript of Protein that interacts with Tap42p, which regulates PP2A, yeast

Gene TIP41, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIP41	YPR040W	TIR4	Q12218	487 aa	Predicted RBP	4.14	□□□□□ -1.75
TIP41	YPR040W	TRM10	Q12400	293 aa		4.14	□□□□□ -1.75
TIP41	YPR040W	AI5_BETA	Q9ZZX0	354 aa		4.14	□□□□□ -1.75
TIP41	YPR040W	YMR316C-A	I2HB70	103 aa		4.13	□□□□□ -1.75
TIP41	YPR040W	YKR104W	P0CE69	306 aa		4.13	□□□□□ -1.75
TIP41	YPR040W	MRP21	P38175	177 aa		4.13	□□□□□ -1.75
TIP41	YPR040W	YFL064C	P43540	174 aa		4.13	□□□□□ -1.75
TIP41	YPR040W	GLG2	P47011	380 aa		4.13	□□□□□ -1.75
TIP41	YPR040W	MAL13	P53338	473 aa		4.13	□□□□□ -1.75
TIP41	YPR040W	MRS2	Q01926	470 aa		4.13	□□□□□ -1.75
TIP41	YPR040W	GRX3	Q03835	250 aa		4.13	□□□□□ -1.75
TIP41	YPR040W	PEX11	Q12462	236 aa		4.13	□□□□□ -1.75
TIP41	YPR040W	YAL064W-B	O13512	126 aa		4.12	□□□□□ -1.75
TIP41	YPR040W	MIC19	P43594	170 aa		4.12	□□□□□ -1.75
TIP41	YPR040W	YPL150W	Q12152	901 aa		4.12	□□□□□ -1.75
TIP41	YPR040W	SME1	Q12330	94 aa	Predicted RBP	4.12	□□□□□ -1.75
TIP41	YPR040W	YOS9	Q99220	542 aa		4.12	□□□□□ -1.75
TIP41	YPR040W	YOL085C	Q99345	113 aa		4.12	□□□□□ -1.75
TIP41	YPR040W	ATG15	P25641	520 aa		4.11	□□□□□ -1.75
TIP41	YPR040W	PEX3	P28795	441 aa		4.11	□□□□□ -1.75
TIP41	YPR040W	BMH1	P29311	267 aa	Known RBP	4.11	□□□□□ -1.75
TIP41	YPR040W	NTG1	P31378	399 aa		4.11	□□□□□ -1.75
TIP41	YPR040W	QRI5	P32344	111 aa		4.11	□□□□□ -1.75
TIP41	YPR040W	KRE6	P32486	720 aa		4.11	□□□□□ -1.75
TIP41	YPR040W	ECM19	Q06011	112 aa		4.11	□□□□□ -1.75
TIP41	YPR040W	DFM1	Q12743	341 aa	Known RBP	4.11	□□□□□ -1.75
TIP41	YPR040W	TPI1	P00942	248 aa	Known RBP	4.1	□□□□□ -1.75
TIP41	YPR040W	ZIP1	P31111	875 aa		4.1	□□□□□ -1.75
TIP41	YPR040W	TPS2	P31688	896 aa	Known RBP	4.1	□□□□□ -1.75
TIP41	YPR040W	ALK2	P32789	676 aa	Predicted RBP	4.1	□□□□□ -1.75
TIP41	YPR040W	CSG2	P35206	410 aa		4.1	□□□□□ -1.75
TIP41	YPR040W	LDB7	P38210	180 aa		4.1	□□□□□ -1.75
TIP41	YPR040W	EDC3	P39998	551 aa	Known RBP	4.1	□□□□□ -1.75
TIP41	YPR040W	EDC2	P40023	145 aa	Predicted RBP	4.1	□□□□□ -1.75
TIP41	YPR040W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
TIP41	YPR040W	YPR114W	Q06107	315 aa		4.1	□□□□□ -1.75
TIP41	YPR040W	YPL119C-A	Q3E751	87 aa		4.1	□□□□□ -1.75
TIP41	YPR040W	YAL063C-A	Q3E791	96 aa		4.1	□□□□□ -1.75
TIP41	YPR040W	UBR1	P19812	1950 aa		4.09	□□□□□ -1.75
TIP41	YPR040W	MATALPHA1	P0CY06	175 aa		4.09	□□□□□ -1.75
TIP41	YPR040W	HMLALPHA1	P0CY07	175 aa		4.09	□□□□□ -1.75
TIP41	YPR040W	SCL1	P21243	252 aa	Known RBP	4.09	□□□□□ -1.75
TIP41	YPR040W	RNA15	P25299	296 aa	Predicted RBP	4.09	□□□□□ -1.75
TIP41	YPR040W	CAM1	P29547	415 aa	Known RBP	4.09	□□□□□ -1.75
TIP41	YPR040W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
TIP41	YPR040W	YER184C	P39961	794 aa		4.09	□□□□□ -1.75
TIP41	YPR040W	YEL075C	P39972	122 aa		4.09	□□□□□ -1.75
TIP41	YPR040W	YFL012W	P43580	148 aa		4.09	□□□□□ -1.75
TIP41	YPR040W	CAX4	P53223	239 aa		4.09	□□□□□ -1.75
TIP41	YPR040W	YNL095C	P53932	642 aa		4.09	□□□□□ -1.75
TIP41	YPR040W	LOA1	Q06508	300 aa		4.09	□□□□□ -1.75
TIP41	YPR040W	YOR097C	Q12274	175 aa	Predicted RBP	4.09	□□□□□ -1.75
TIP41	YPR040W	TDH2	P00358	332 aa	Known RBP	4.08	□□□□□ -1.76
TIP41	YPR040W	COX10	P21592	462 aa		4.08	□□□□□ -1.76
TIP41	YPR040W	VPH2	P32341	215 aa		4.08	□□□□□ -1.76
TIP41	YPR040W	ASP1	P38986	381 aa	Predicted RBP	4.08	□□□□□ -1.76
TIP41	YPR040W	HOP2	P53187	214 aa		4.08	□□□□□ -1.76
TIP41	YPR040W	VPS68	Q12016	184 aa		4.08	□□□□□ -1.76
TIP41	YPR040W	EMP46	Q12396	444 aa		4.08	□□□□□ -1.76
TIP41	YPR040W	SNF8	Q12483	233 aa		4.08	□□□□□ -1.76
TIP41	YPR040W	DYN1	P36022	4092 aa		4.07	□□□□□ -1.76
TIP41	YPR040W	RPB9	P27999	122 aa		4.07	□□□□□ -1.76
TIP41	YPR040W	CAT2	P32796	670 aa	Known RBP	4.07	□□□□□ -1.76
TIP41	YPR040W	JEN1	P36035	616 aa		4.07	□□□□□ -1.76
TIP41	YPR040W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	RIP-Chip
TIP41	YPR040W	POP8	P38208	133 aa		4.07	□□□□□ -1.76
TIP41	YPR040W	SEO1	P39709	593 aa		4.07	□□□□□ -1.76
TIP41	YPR040W	SMB1	P40018	196 aa	Known RBP	4.07	□□□□□ -1.76
TIP41	YPR040W	GCN20	P43535	752 aa	Known RBP	4.07	□□□□□ -1.76
TIP41	YPR040W	FMP41	P53889	259 aa	Known RBP	4.07	□□□□□ -1.76
TIP41	YPR040W	ASI3	P53983	676 aa		4.07	□□□□□ -1.76
TIP41	YPR040W	YLR283W	Q05867	314 aa		4.07	□□□□□ -1.76
TIP41	YPR040W	PLB3	Q08108	686 aa		4.07	□□□□□ -1.76
TIP41	YPR040W	YDL211C	Q12121	372 aa		4.07	□□□□□ -1.76
TIP41	YPR040W	STT4	P37297	1900 aa		4.07	□□□□□ -1.76
TIP41	YPR040W	DOA4	P32571	926 aa		4.06	□□□□□ -1.76
TIP41	YPR040W	MRPS9	P38120	278 aa		4.06	□□□□□ -1.76
TIP41	YPR040W	BDH1	P39714	382 aa		4.06	□□□□□ -1.76
TIP41	YPR040W	FRT2	P39734	528 aa		4.06	□□□□□ -1.76
TIP41	YPR040W	SDC1	Q03323	175 aa		4.06	□□□□□ -1.76
TIP41	YPR040W	KRE28	Q04431	385 aa		4.06	□□□□□ -1.76
TIP41	YPR040W	MRX8	Q05473	314 aa		4.06	□□□□□ -1.76
TIP41	YPR040W	GRX8	Q05926	109 aa		4.06	□□□□□ -1.76
TIP41	YPR040W	YLR030W	Q07967	263 aa		4.06	□□□□□ -1.76
TIP41	YPR040W	ARG80	P07249	177 aa		4.05	□□□□□ -1.76
TIP41	YPR040W	PHO89	P38361	574 aa		4.05	□□□□□ -1.76
TIP41	YPR040W	MSS2	P40990	351 aa		4.05	□□□□□ -1.76
TIP41	YPR040W	USE1	P53146	245 aa		4.05	□□□□□ -1.76
TIP41	YPR040W	ACT1	P60010	375 aa	Known RBP	4.05	□□□□□ -1.76
TIP41	YPR040W	PEX10	Q05568	337 aa		4.05	□□□□□ -1.76
TIP41	YPR040W	MED8	P38304	223 aa		4.04	□□□□□ -1.76
TIP41	YPR040W	AVT6	P40074	448 aa		4.04	□□□□□ -1.76
TIP41	YPR040W	YER189W	P40104	122 aa		4.04	□□□□□ -1.76
TIP41	YPR040W	SWT21	P53873	357 aa	Predicted RBP	4.04	□□□□□ -1.76
TIP41	YPR040W	RRS1	Q08746	203 aa	Known RBP	4.04	□□□□□ -1.76
TIP41	YPR040W	CSM4	Q08955	156 aa		4.04	□□□□□ -1.76
TIP41	YPR040W	YRA1	Q12159	226 aa	Known RBP	4.04	□□□□□ -1.76
TIP41	YPR040W	BCY1	P07278	416 aa	Known RBP	4.03	□□□□□ -1.76
TIP41	YPR040W	FUS3	P16892	353 aa	Known RBP	4.03	□□□□□ -1.76
TIP41	YPR040W	PHO80	P20052	293 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 72.9 ms