RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	YBR096W	P38256	230 aa		1.04	□□□□□ -2.24
YPR039W	YPR039W	ERV15	P38312	142 aa		1.04	□□□□□ -2.24
YPR039W	YPR039W	DSE2	P38844	325 aa		1.04	□□□□□ -2.24
YPR039W	YPR039W	MEP1	P40260	492 aa		1.04	□□□□□ -2.24
YPR039W	YPR039W	FIS1	P40515	155 aa		1.04	□□□□□ -2.24
YPR039W	YPR039W	GLG2	P47011	380 aa		1.04	□□□□□ -2.24
YPR039W	YPR039W	RPL9B	P51401	191 aa	Known RBP	1.04	□□□□□ -2.24
YPR039W	YPR039W	RMR1	P53060	241 aa		1.04	□□□□□ -2.24
YPR039W	YPR039W	RRS1	Q08746	203 aa	Known RBP	1.04	□□□□□ -2.24
YPR039W	YPR039W	YPL257W	Q08974	193 aa		1.04	□□□□□ -2.24
YPR039W	YPR039W	MSW1	P04803	379 aa		1.03	□□□□□ -2.24
YPR039W	YPR039W	DDI2	P0CH63	225 aa		1.03	□□□□□ -2.24
YPR039W	YPR039W	DDI3	P0CH64	225 aa		1.03	□□□□□ -2.24
YPR039W	YPR039W	RNA15	P25299	296 aa	Predicted RBP	1.03	□□□□□ -2.24
YPR039W	YPR039W	OAC1	P32332	324 aa		1.03	□□□□□ -2.24
YPR039W	YPR039W	YKR045C	P36138	183 aa		1.03	□□□□□ -2.24
YPR039W	YPR039W	YKE4	P40544	346 aa		1.03	□□□□□ -2.24
YPR039W	YPR039W	USE1	P53146	245 aa		1.03	□□□□□ -2.24
YPR039W	YPR039W	USB1	Q12208	290 aa	Known RBP	1.03	□□□□□ -2.24
YPR039W	YPR039W	SIR4	P11978	1358 aa		1.03	□□□□□ -2.24
YPR039W	YPR039W	IPP1	P00817	287 aa	Known RBP	1.02	□□□□□ -2.25
YPR039W	YPR039W	BIG1	P38813	335 aa		1.02	□□□□□ -2.25
YPR039W	YPR039W	MPP6	P53725	186 aa	Predicted RBP	1.02	□□□□□ -2.25
YPR039W	YPR039W	YNL046W	P53956	172 aa		1.02	□□□□□ -2.25
YPR039W	YPR039W	NEJ1	Q06148	342 aa		1.02	□□□□□ -2.25
YPR039W	YPR039W	ATG39	Q06159	398 aa		1.02	□□□□□ -2.25
YPR039W	YPR039W	BTS1	Q12051	335 aa		1.02	□□□□□ -2.25
YPR039W	YPR039W	SNU23	Q12368	194 aa	Predicted RBP	1.02	□□□□□ -2.25
YPR039W	YPR039W	HTL1	Q9URQ5	78 aa		1.02	□□□□□ -2.25
YPR039W	YPR039W	MSF1	P08425	469 aa		1.01	□□□□□ -2.25
YPR039W	YPR039W	SNA3	P14359	133 aa		1.01	□□□□□ -2.25
YPR039W	YPR039W	GRX2	P17695	143 aa	Known RBP	1.01	□□□□□ -2.25
YPR039W	YPR039W	YPT52	P36018	234 aa	Known RBP	1.01	□□□□□ -2.25
YPR039W	YPR039W	YBR219C	P38317	127 aa		1.01	□□□□□ -2.25
YPR039W	YPR039W	YHR180W	P38868	163 aa		1.01	□□□□□ -2.25
YPR039W	YPR039W	RTT105	P40063	208 aa		1.01	□□□□□ -2.25
YPR039W	YPR039W	YIL001W	P40560	513 aa		1.01	□□□□□ -2.25
YPR039W	YPR039W	RHO3	Q00245	231 aa	Known RBP	1.01	□□□□□ -2.25
YPR039W	YPR039W	ARR2	Q06597	130 aa		1.01	□□□□□ -2.25
YPR039W	YPR039W	HEM25	Q07534	307 aa		1.01	□□□□□ -2.25
YPR039W	YPR039W	SDO1	Q07953	250 aa	Known RBP	1.01	□□□□□ -2.25
YPR039W	YPR039W	CSM4	Q08955	156 aa		1.01	□□□□□ -2.25
YPR039W	YPR039W	YCT1	Q12235	531 aa		1.01	□□□□□ -2.25
YPR039W	YPR039W	YGL010W	P25338	174 aa		1	□□□□□ -2.25
YPR039W	YPR039W	YHR127W	P38833	243 aa	Known RBP	1	□□□□□ -2.25
YPR039W	YPR039W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	1	□□□□□ -2.25	not detected
YPR039W	YPR039W	YAR068W	P39564	161 aa		1	□□□□□ -2.25
YPR039W	YPR039W	AVT2	P39981	480 aa		1	□□□□□ -2.25
YPR039W	YPR039W	YJR056C	P47115	236 aa		1	□□□□□ -2.25
YPR039W	YPR039W	BUD25	P85052	153 aa		1	□□□□□ -2.25
YPR039W	YPR039W	RPF1	P38805	295 aa	Known RBP	0.99	□□□□□ -2.25
YPR039W	YPR039W	GLE2	P40066	365 aa		0.99	□□□□□ -2.25
YPR039W	YPR039W	AGE2	P40529	298 aa		0.99	□□□□□ -2.25
YPR039W	YPR039W	RPA43	P46669	326 aa		0.99	□□□□□ -2.25
YPR039W	YPR039W	HAM1	P47119	197 aa	Known RBP	0.99	□□□□□ -2.25
YPR039W	YPR039W	YNR062C	P53748	327 aa		0.99	□□□□□ -2.25
YPR039W	YPR039W	NUP49	Q02199	472 aa		0.99	□□□□□ -2.25
YPR039W	YPR039W	CSI2	Q08054	341 aa		0.99	□□□□□ -2.25
YPR039W	YPR039W	MSA1	Q08471	629 aa		0.99	□□□□□ -2.25
YPR039W	YPR039W	NIP7	Q08962	181 aa	Known RBP	0.99	□□□□□ -2.25
YPR039W	YPR039W	YOR020W-A	Q3E824	90 aa		0.99	□□□□□ -2.25
YPR039W	YPR039W	FCY2	P17064	533 aa		0.98	□□□□□ -2.25
YPR039W	YPR039W	PET9	P18239	318 aa	Known RBP	0.98	□□□□□ -2.25
YPR039W	YPR039W	ERD2	P18414	219 aa		0.98	□□□□□ -2.25
YPR039W	YPR039W	RPS5	P26783	225 aa	Known RBP	0.98	□□□□□ -2.25
YPR039W	YPR039W	ECM33	P38248	429 aa	Known RBP	0.98	□□□□□ -2.25
YPR039W	YPR039W	YBR220C	P38318	560 aa		0.98	□□□□□ -2.25
YPR039W	YPR039W	SVP26	P38869	228 aa		0.98	□□□□□ -2.25
YPR039W	YPR039W	YJR079W	P47126	109 aa		0.98	□□□□□ -2.25
YPR039W	YPR039W	JHD2	P47156	728 aa	Predicted RBP	0.98	□□□□□ -2.25
YPR039W	YPR039W	TOS8	P53147	276 aa		0.98	□□□□□ -2.25
YPR039W	YPR039W	MZM1	Q03429	123 aa	Predicted RBP	0.98	□□□□□ -2.25
YPR039W	YPR039W	SML1	Q04964	104 aa		0.98	□□□□□ -2.25
YPR039W	YPR039W	SEI1	Q06058	285 aa		0.98	□□□□□ -2.25
YPR039W	YPR039W	TPO4	Q12256	659 aa		0.98	□□□□□ -2.25
YPR039W	YPR039W	RSR1	P13856	272 aa		0.97	□□□□□ -2.25
YPR039W	YPR039W	FPR1	P20081	114 aa	Known RBP	0.97	□□□□□ -2.25
YPR039W	YPR039W	RIB7	P33312	244 aa		0.97	□□□□□ -2.25
YPR039W	YPR039W	YMR144W	P40214	342 aa	Known RBP	0.97	□□□□□ -2.25
YPR039W	YPR039W	CAT5	P41735	233 aa		0.97	□□□□□ -2.25
YPR039W	YPR039W	ILM1	P47155	203 aa		0.97	□□□□□ -2.25
YPR039W	YPR039W	KAP95	Q06142	861 aa	Known RBP	0.97	□□□□□ -2.25
YPR039W	YPR039W	MSH5	Q12175	901 aa		0.97	□□□□□ -2.25
YPR039W	YPR039W	YOL107W	Q12239	342 aa		0.97	□□□□□ -2.25
YPR039W	YPR039W	YOR029W	Q12243	111 aa		0.97	□□□□□ -2.25
YPR039W	YPR039W	YKL075C	P36083	450 aa		0.96	□□□□□ -2.26
YPR039W	YPR039W	YBR063C	P38083	404 aa		0.96	□□□□□ -2.26
YPR039W	YPR039W	RSM25	P40496	264 aa		0.96	□□□□□ -2.26
YPR039W	YPR039W	RPL33B	P41056	107 aa	Known RBP	0.96	□□□□□ -2.26
YPR039W	YPR039W	SSQ1	Q05931	657 aa	Predicted RBP	0.96	□□□□□ -2.26
YPR039W	YPR039W	YLR162W	Q06235	118 aa		0.96	□□□□□ -2.26
YPR039W	YPR039W	YPL229W	Q99395	206 aa		0.96	□□□□□ -2.26
YPR039W	YPR039W	FLO9	P39712	1322 aa		0.95	□□□□□ -2.26
YPR039W	YPR039W	CDC8	P00572	216 aa		0.95	□□□□□ -2.26
YPR039W	YPR039W	RPL2A	P0CX45	254 aa	Known RBP	0.95	□□□□□ -2.26
YPR039W	YPR039W	RPL2B	P0CX46	254 aa	Known RBP	0.95	□□□□□ -2.26
YPR039W	YPR039W	TCP1	P12612	559 aa	Known RBP	0.95	□□□□□ -2.26
YPR039W	YPR039W	RPL13B	P40212	199 aa	Known RBP	0.95	□□□□□ -2.26
YPR039W	YPR039W	TIR3	P40552	269 aa		0.95	□□□□□ -2.26
YPR039W	YPR039W	GPI8	P49018	411 aa		0.95	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms