RNA–Protein interactions for RNA: YPL253C

VIK1, Transcript of Protein that forms a kinesin-14 heterodimeric motor with Kar3p, yeast

Gene VIK1, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIK1	YPL253C	ATG31	Q12421	196 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	SNF8	Q12483	233 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	ACC1	Q00955	2233 aa	Known RBP	0.28	□□□□□ -2.36
VIK1	YPL253C	YLR462W	O13556	202 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	DSF1	P0CX08	502 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	YNR073C	P0CX09	502 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	MDH2	P22133	377 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	ERG24	P32462	438 aa	Known RBP	0.28	□□□□□ -2.36
VIK1	YPL253C	VMA11	P32842	164 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	SSH1	P38353	490 aa	Known RBP	0.28	□□□□□ -2.36
VIK1	YPL253C	PET100	P38958	111 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	YEL075C	P39972	122 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	BMT5	P40493	336 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	BNA6	P43619	295 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	HOC1	P47124	396 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	YJR079W	P47126	109 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	USE1	P53146	245 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.28	□□□□□ -2.36	not detected
VIK1	YPL253C	YDR209C	Q03480	137 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	MRPS8	Q03799	155 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	ADH6	Q04894	360 aa	Known RBP	0.28	□□□□□ -2.36
VIK1	YPL253C	YPR098C	Q06089	161 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	YPR172W	Q06608	200 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	YCT1	Q12235	531 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	YLR126C	Q12288	251 aa		0.28	□□□□□ -2.36
VIK1	YPL253C	INO80	P53115	1489 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	FKS1	P38631	1876 aa	Known RBP	0.27	□□□□□ -2.37
VIK1	YPL253C	CSF1	Q12150	2958 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	YER188C-A	P0C0V2	99 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	RPL2A	P0CX45	254 aa	Known RBP	0.27	□□□□□ -2.37
VIK1	YPL253C	RPL2B	P0CX46	254 aa	Known RBP	0.27	□□□□□ -2.37
VIK1	YPL253C	ERD2	P18414	219 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	PEX4	P29340	183 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	SGE1	P33335	543 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	EBP2	P36049	427 aa	Known RBP	0.27	□□□□□ -2.37
VIK1	YPL253C	YKL075C	P36083	450 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	LDB7	P38210	180 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	COS8	P38723	381 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	DOG1	P38774	246 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.27	□□□□□ -2.37	not detected
VIK1	YPL253C	ARC15	P40518	154 aa	RIP-Chip data	0.27	□□□□□ -2.37	not detected
VIK1	YPL253C	RPA43	P46669	326 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	TOS8	P53147	276 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	GTR2	P53290	341 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	GOT1	Q03554	138 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	YDR124W	Q04608	324 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	SEI1	Q06058	285 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	ATG17	Q06410	417 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	ARR2	Q06597	130 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	CSI2	Q08054	341 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	SYC1	Q08553	188 aa	Predicted RBP	0.27	□□□□□ -2.37
VIK1	YPL253C	NIP7	Q08962	181 aa	Known RBP	0.27	□□□□□ -2.37
VIK1	YPL253C	AKR2	Q12013	749 aa		0.27	□□□□□ -2.37
VIK1	YPL253C	CFT1	Q06632	1357 aa	Known RBP	0.27	□□□□□ -2.37
VIK1	YPL253C	IPP1	P00817	287 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	MATALPHA1	P0CY06	175 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	HMLALPHA1	P0CY07	175 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	SNA3	P14359	133 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	RNA15	P25299	296 aa	Predicted RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	NTF2	P33331	125 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	SRY1	P36007	326 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	VPS21	P36017	210 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	YPT52	P36018	234 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	MRPL39	P36533	70 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	ECM33	P38248	429 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	YHR022C	P38763	256 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	YHR127W	P38833	243 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	YHR180W	P38868	163 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	CAT5	P41735	233 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	TRM9	P49957	279 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	RHO3	Q00245	231 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	CYT2	Q00873	224 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	SPG3	Q04398	127 aa	Predicted RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	FAR8	Q05040	523 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	ATG39	Q06159	398 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	YLR173W	Q06247	608 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	HEM25	Q07534	307 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	PAM18	Q07914	168 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	RRP40	Q08285	240 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	CSM4	Q08955	156 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	YPL257W	Q08974	193 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	FAS1	P07149	2051 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	SIR4	P11978	1358 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	IRA2	P19158	3079 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	CYR1	P08678	2026 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	RPL9A	P05738	191 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	DDI2	P0CH63	225 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	DDI3	P0CH64	225 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	FCY2	P17064	533 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	GRX2	P17695	143 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	RPO26	P20435	155 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	OAC1	P32332	324 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	YBR063C	P38083	404 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	PHO88	P38264	188 aa	Predicted RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	RPF1	P38805	295 aa	Known RBP	0.26	□□□□□ -2.37
VIK1	YPL253C	IRC22	P40006	225 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	VTC1	P40046	129 aa	RIP-Chip data	0.26	□□□□□ -2.37	not detected
VIK1	YPL253C	FIS1	P40515	155 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	PRM10	P42946	383 aa		0.26	□□□□□ -2.37
VIK1	YPL253C	YJR149W	P47177	404 aa		0.26	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms