RNA–Protein interactions for RNA: YPL234C

VMA11, Transcript of Vacuolar ATPase V0 domain subunit c', yeast

Gene VMA11, Length 495 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	YPL234C	ISC10	P32645	267 aa		7.57	□□□□□ -1.2
VMA11	YPL234C	RPL13B	P40212	199 aa	Known RBP	7.57	□□□□□ -1.2
VMA11	YPL234C	CAF16	P43569	289 aa		7.57	□□□□□ -1.2
VMA11	YPL234C	CTK2	P46962	323 aa		7.57	□□□□□ -1.2
VMA11	YPL234C	AVT4	P50944	713 aa		7.57	□□□□□ -1.2
VMA11	YPL234C	CAF40	P53829	373 aa		7.57	□□□□□ -1.2
VMA11	YPL234C	RSM23	Q01163	450 aa		7.57	□□□□□ -1.2
VMA11	YPL234C	MRX9	Q07349	420 aa	Known RBP	7.57	□□□□□ -1.2
VMA11	YPL234C	RPL13A	Q12690	199 aa	Predicted RBP	7.57	□□□□□ -1.2
VMA11	YPL234C	LNP1	P38878	278 aa		7.56	□□□□□ -1.2
VMA11	YPL234C	EMC5	P40540	141 aa		7.56	□□□□□ -1.2
VMA11	YPL234C	YJR011C	P47086	261 aa	Predicted RBP	7.56	□□□□□ -1.2
VMA11	YPL234C	HOL1	P53389	586 aa		7.56	□□□□□ -1.2
VMA11	YPL234C	NRM1	P53718	249 aa		7.56	□□□□□ -1.2
VMA11	YPL234C	YNR048W	P53740	393 aa		7.56	□□□□□ -1.2
VMA11	YPL234C	FMP41	P53889	259 aa	Known RBP	7.56	□□□□□ -1.2
VMA11	YPL234C	HAS1	Q03532	505 aa	Known RBP	7.56	□□□□□ -1.2
VMA11	YPL234C	AKR2	Q12013	749 aa		7.56	□□□□□ -1.2
VMA11	YPL234C	PCC1	Q3E833	88 aa		7.56	□□□□□ -1.2
VMA11	YPL234C	NUM1	Q00402	2748 aa		7.56	□□□□□ -1.2
VMA11	YPL234C	TDH1	P00360	332 aa	Known RBP	7.55	□□□□□ -1.2
VMA11	YPL234C	RPL17A	P05740	184 aa	Known RBP	7.55	□□□□□ -1.2
VMA11	YPL234C	QCR2	P07257	368 aa		7.55	□□□□□ -1.2
VMA11	YPL234C	OLE1	P21147	510 aa	Known RBP	7.55	□□□□□ -1.2
VMA11	YPL234C	COQ2	P32378	372 aa		7.55	□□□□□ -1.2
VMA11	YPL234C	RPL17B	P46990	184 aa	Known RBP	7.55	□□□□□ -1.2
VMA11	YPL234C	MSY1	P48527	492 aa		7.55	□□□□□ -1.2
VMA11	YPL234C	SRP1	Q02821	542 aa	Known RBP	7.55	□□□□□ -1.2
VMA11	YPL234C	SDC1	Q03323	175 aa		7.55	□□□□□ -1.2
VMA11	YPL234C	GIS1	Q03833	894 aa		7.55	□□□□□ -1.2
VMA11	YPL234C	MIX14	Q04341	121 aa		7.55	□□□□□ -1.2
VMA11	YPL234C	YCT1	Q12235	531 aa		7.55	□□□□□ -1.2
VMA11	YPL234C	HO	P09932	586 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	MIR1	P23641	311 aa	Known RBP	7.54	□□□□□ -1.2
VMA11	YPL234C	ERG8	P24521	451 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	PCL1	P24867	279 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	YBR096W	P38256	230 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	SHG1	P38337	142 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	GPI16	P38875	610 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	ATF1	P40353	525 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	IRC24	P40580	263 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	MOB2	P43563	287 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	AGX1	P43567	385 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	NSA1	P53136	463 aa	Predicted RBP	7.54	□□□□□ -1.2
VMA11	YPL234C	GPI15	P53961	229 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	ATG21	Q02887	496 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	EST3	Q03096	181 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	NRG1	Q03125	231 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	THI74	Q04083	370 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	ERP1	Q05359	219 aa	Known RBP	7.54	□□□□□ -1.2
VMA11	YPL234C	GRE1	Q08969	168 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	TY1A-DR3	Q12441	440 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	YOR032W-A	Q8TGS1	66 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	HBN1	Q96VH4	193 aa		7.54	□□□□□ -1.2
VMA11	YPL234C	YPT1	P01123	206 aa	Known RBP	7.53	□□□□□ -1.2
VMA11	YPL234C	GAL1	P04385	528 aa		7.53	□□□□□ -1.2
VMA11	YPL234C	MSK1	P32048	576 aa		7.53	□□□□□ -1.2
VMA11	YPL234C	AGA2	P32781	87 aa		7.53	□□□□□ -1.2
VMA11	YPL234C	SOF1	P33750	489 aa	Known RBP	7.53	□□□□□ -1.2
VMA11	YPL234C	FIG1	P38224	298 aa		7.53	□□□□□ -1.2
VMA11	YPL234C	YBR197C	P38306	217 aa		7.53	□□□□□ -1.2
VMA11	YPL234C	YEA6	P39953	335 aa		7.53	□□□□□ -1.2
VMA11	YPL234C	YIL024C	P40543	189 aa		7.53	□□□□□ -1.2
VMA11	YPL234C	GPP1	P41277	250 aa	Known RBP	7.53	□□□□□ -1.2
VMA11	YPL234C	OCA1	P50946	238 aa	Predicted RBP	7.53	□□□□□ -1.2
VMA11	YPL234C	SDO1	Q07953	250 aa	Known RBP	7.53	□□□□□ -1.2
VMA11	YPL234C	ZEO1	Q08245	113 aa		7.53	□□□□□ -1.2
VMA11	YPL234C	PRS5	Q12265	496 aa	Known RBP	7.53	□□□□□ -1.2
VMA11	YPL234C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	7.52	□□□□□ -1.21	not detected
VMA11	YPL234C	COX5B	P00425	151 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	YFR010W-A	P0C5N0	62 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	RPL30	P14120	105 aa	Known RBP	7.52	□□□□□ -1.21
VMA11	YPL234C	DAL82	P21705	255 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	MDH2	P22133	377 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	YKL162C	P36052	402 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	IKI1	P38874	309 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	YND1	P40009	630 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	MID1	P41821	548 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	QRI1	P43123	477 aa	Known RBP	7.52	□□□□□ -1.21
VMA11	YPL234C	DUG1	P43616	481 aa	Known RBP	7.52	□□□□□ -1.21
VMA11	YPL234C	PCP1	P53259	346 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	PBP1	P53297	722 aa	Known RBP	7.52	□□□□□ -1.21
VMA11	YPL234C	HHO1	P53551	258 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	APJ1	P53940	528 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	YCL001W-A	P87012	153 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	VPS28	Q02767	242 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	YDR387C	Q04162	555 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	USB1	Q12208	290 aa	Known RBP	7.52	□□□□□ -1.21
VMA11	YPL234C	HUT1	Q12520	339 aa		7.52	□□□□□ -1.21
VMA11	YPL234C	YLL053C	P0CD98	152 aa		7.51	□□□□□ -1.21
VMA11	YPL234C	CKA1	P15790	372 aa		7.51	□□□□□ -1.21
VMA11	YPL234C	SED4	P25365	1065 aa		7.51	□□□□□ -1.21
VMA11	YPL234C	ECM31	P38122	312 aa		7.51	□□□□□ -1.21
VMA11	YPL234C	FAT1	P38225	669 aa		7.51	□□□□□ -1.21
VMA11	YPL234C	POG1	P40473	351 aa		7.51	□□□□□ -1.21
VMA11	YPL234C	ADO1	P47143	340 aa	Known RBP	7.51	□□□□□ -1.21
VMA11	YPL234C	HHT1	P61830	136 aa		7.51	□□□□□ -1.21
VMA11	YPL234C	MRPS17	Q03246	237 aa	Predicted RBP	7.51	□□□□□ -1.21
VMA11	YPL234C	Q0142	Q9ZZW4	58 aa		7.51	□□□□□ -1.21
VMA11	YPL234C	IPP1	P00817	287 aa	Known RBP	7.5	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms