RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W PPZ2P33329 710 aa1.98□□□□□ -2.09
SEC16YPL085W YBR056WP38081 501 aa1.98□□□□□ -2.09
SEC16YPL085W DLD3P39976 496 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W YJR154WP47181 346 aa1.98□□□□□ -2.09
SEC16YPL085W PRM8P53174 237 aa1.98□□□□□ -2.09
SEC16YPL085W YOR283WQ12040 230 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W SCS22Q6Q595 175 aa1.98□□□□□ -2.09
SEC16YPL085W TPI1P00942 248 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W ZRC1P20107 442 aa1.98□□□□□ -2.09
SEC16YPL085W TRX3P25372 127 aa1.98□□□□□ -2.09
SEC16YPL085W INO2P26798 304 aa1.98□□□□□ -2.09
SEC16YPL085W COQ2P32378 372 aa1.98□□□□□ -2.09
SEC16YPL085W DPH5P32469 300 aaPredicted RBP1.98□□□□□ -2.09
SEC16YPL085W GPX2P38143 162 aa1.98□□□□□ -2.09
SEC16YPL085W MED6P38782 295 aa1.98□□□□□ -2.09
SEC16YPL085W LSM12P38828 187 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W YEA4P40004 342 aa1.98□□□□□ -2.09
SEC16YPL085W YJR120WP47157 116 aa1.98□□□□□ -2.09
SEC16YPL085W PEF1P53238 335 aa1.98□□□□□ -2.09
SEC16YPL085W SKO1Q02100 647 aa1.98□□□□□ -2.09
SEC16YPL085W YDR541CQ03049 344 aa1.98□□□□□ -2.09
SEC16YPL085W ROT1Q03691 256 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-DR4O74302 440 aa1.98□□□□□ -2.09
SEC16YPL085W MES1P00958 751 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W HIS3P06633 220 aa1.98□□□□□ -2.09
SEC16YPL085W PUT1P09368 476 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-HP0C2I4 478 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W TY1A-LR4P0C2I8 440 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W PAU19P0CE85 124 aa1.98□□□□□ -2.09
SEC16YPL085W PAU21P0CE86 164 aa1.98□□□□□ -2.09
SEC16YPL085W PAU22P0CE87 164 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-AP0CX57 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-PR1P0CX58 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-ORP0CX59 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-PR2P0CX60 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-DR5P0CX65 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-ER2P0CX66 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-GR3P0CX67 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-LR1P0CX68 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-MR2P0CX69 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-DR6P0CX70 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-ER1P0CX71 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-LR2P0CX72 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-PLP0CX73 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-JR1P0CX74 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-LR3P0CX75 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-ML2P0CX76 440 aa1.98□□□□□ -2.09
SEC16YPL085W PAU3P25610 124 aa1.98□□□□□ -2.09
SEC16YPL085W MRPL27P36526 146 aaPredicted RBP1.98□□□□□ -2.09
SEC16YPL085W MRPS9P38120 278 aa1.98□□□□□ -2.09
SEC16YPL085W GAT2P40209 560 aa1.98□□□□□ -2.09
SEC16YPL085W RFC4P40339 323 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W PGD1P40356 397 aa1.98□□□□□ -2.09
SEC16YPL085W SDP1P40479 209 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-JR2P47099 440 aa1.98□□□□□ -2.09
SEC16YPL085W UBC13P52490 153 aa1.98□□□□□ -2.09
SEC16YPL085W ALG9P53868 555 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W ATG21Q02887 496 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-DR1Q03856 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-MR1Q04215 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-ML1Q04706 440 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W ERF2Q06551 359 aa1.98□□□□□ -2.09
SEC16YPL085W LDS2Q08218 356 aa1.98□□□□□ -2.09
SEC16YPL085W MCH4Q08268 501 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-GR1Q12085 440 aa1.98□□□□□ -2.09
SEC16YPL085W FRE8Q12209 686 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-BLQ12266 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-DR3Q12441 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-NL2Q12470 440 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-GR2Q12485 440 aa1.98□□□□□ -2.09
SEC16YPL085W YGL258W-AQ3E740 77 aa1.98□□□□□ -2.09
SEC16YPL085W TY1A-PR3Q6Q5H1 440 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W TY1A-OLQ92392 440 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W RPB3P16370 318 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W GPI12P23797 304 aa1.98□□□□□ -2.09
SEC16YPL085W POF1P25576 258 aa1.98□□□□□ -2.09
SEC16YPL085W MLF3P32047 452 aa1.98□□□□□ -2.09
SEC16YPL085W NDC1P32500 655 aa1.98□□□□□ -2.09
SEC16YPL085W TIM12P32830 109 aa1.98□□□□□ -2.09
SEC16YPL085W ERV15P38312 142 aa1.98□□□□□ -2.09
SEC16YPL085W YER188WP40103 239 aa1.98□□□□□ -2.09
SEC16YPL085W UBX6P47049 396 aa1.98□□□□□ -2.09
SEC16YPL085W YJL016WP47072 561 aa1.98□□□□□ -2.09
SEC16YPL085W PCP1P53259 346 aa1.98□□□□□ -2.09
SEC16YPL085W MSS11Q03825 758 aa1.98□□□□□ -2.09
SEC16YPL085W TMA10Q06177 86 aa1.98□□□□□ -2.09
SEC16YPL085W TPO3Q06451 622 aa1.98□□□□□ -2.09
SEC16YPL085W MIM1Q08176 113 aa1.98□□□□□ -2.09
SEC16YPL085W HRP1Q99383 534 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W AQY1P0CD91 305 aa1.97□□□□□ -2.09
SEC16YPL085W YCP4P25349 247 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W BOR1P53838 576 aa1.97□□□□□ -2.09
SEC16YPL085W YFH1Q07540 174 aa1.97□□□□□ -2.09
SEC16YPL085W YOL159CQ08300 171 aa1.97□□□□□ -2.09
SEC16YPL085W UBA3Q99344 299 aa1.97□□□□□ -2.09
SEC16YPL085W MAG1P22134 296 aaKnown RBP1.97□□□□□ -2.09
SEC16YPL085W VMA3P25515 160 aa1.97□□□□□ -2.09
SEC16YPL085W YBR013CP38215 129 aa1.97□□□□□ -2.09
SEC16YPL085W CHS7P38843 316 aa1.97□□□□□ -2.09
SEC16YPL085W UIP3P39547 235 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms