RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C UPS1Q05776 175 aa6.73□□□□□ -1.33
PUP1YOR157C DTD1Q07648 150 aaKnown RBP6.73□□□□□ -1.33
PUP1YOR157C YOL114CQ12322 202 aa6.73□□□□□ -1.33
PUP1YOR157C PCL9Q12477 304 aa6.73□□□□□ -1.33
PUP1YOR157C LSO1Q3E827 93 aa6.73□□□□□ -1.33
PUP1YOR157C FBA1P14540 359 aaKnown RBP6.72□□□□□ -1.33
PUP1YOR157C OAC1P32332 324 aa6.72□□□□□ -1.33
PUP1YOR157C MRPL6P32904 214 aa6.72□□□□□ -1.33
PUP1YOR157C SSH1P38353 490 aaKnown RBP6.72□□□□□ -1.33
PUP1YOR157C MRX5P47007 382 aa6.72□□□□□ -1.33
PUP1YOR157C ISU1Q03020 165 aa6.72□□□□□ -1.33
PUP1YOR157C YDR415CQ04033 374 aaPredicted RBP6.72□□□□□ -1.33
PUP1YOR157C FRE6Q12473 712 aa6.72□□□□□ -1.33
PUP1YOR157C TDH1P00360 332 aaKnown RBP6.71□□□□□ -1.34
PUP1YOR157C YCR061WP25639 631 aa6.71□□□□□ -1.34
PUP1YOR157C ECT1P33412 323 aa6.71□□□□□ -1.34
PUP1YOR157C SDH4P37298 181 aa6.71□□□□□ -1.34
PUP1YOR157C SYG1P40528 902 aa6.71□□□□□ -1.34
PUP1YOR157C HSK3P69852 69 aa6.71□□□□□ -1.34
PUP1YOR157C YML122CQ03207 126 aa6.71□□□□□ -1.34
PUP1YOR157C YLR346CQ06139 101 aa6.71□□□□□ -1.34
PUP1YOR157C MRX9Q07349 420 aaKnown RBP6.71□□□□□ -1.34
PUP1YOR157C YOR186WQ08560 144 aa6.71□□□□□ -1.34
PUP1YOR157C VIK1Q12045 647 aa6.71□□□□□ -1.34
PUP1YOR157C PET122P10355 254 aa6.7□□□□□ -1.34
PUP1YOR157C HEM13P11353 328 aaKnown RBP6.7□□□□□ -1.34
PUP1YOR157C FLO10P36170 1169 aa6.7□□□□□ -1.34
PUP1YOR157C MDM31P38880 579 aa6.7□□□□□ -1.34
PUP1YOR157C SOP4P39543 234 aaPredicted RBP6.7□□□□□ -1.34
PUP1YOR157C PAC2P39937 518 aa6.7□□□□□ -1.34
PUP1YOR157C YJL213WP40896 331 aa6.7□□□□□ -1.34
PUP1YOR157C LYS20P48570 428 aaKnown RBP6.7□□□□□ -1.34
PUP1YOR157C YIP1P53039 248 aa6.7□□□□□ -1.34
PUP1YOR157C PRM3Q08931 133 aa6.7□□□□□ -1.34
PUP1YOR157C ADK1P07170 222 aaKnown RBP6.69□□□□□ -1.34
PUP1YOR157C APE2P32454 952 aaKnown RBP6.69□□□□□ -1.34
PUP1YOR157C UTR5P32630 166 aa6.69□□□□□ -1.34
PUP1YOR157C ECM4P36156 370 aa6.69□□□□□ -1.34
PUP1YOR157C SWP82P43554 623 aa6.69□□□□□ -1.34
PUP1YOR157C OSW1Q08692 278 aa6.69□□□□□ -1.34
PUP1YOR157C YPL199CQ08954 240 aa6.69□□□□□ -1.34
PUP1YOR157C GAR1P28007 205 aaKnown RBP6.68□□□□□ -1.34
PUP1YOR157C RAD23P32628 398 aaKnown RBP6.68□□□□□ -1.34
PUP1YOR157C CPR5P35176 225 aa6.68□□□□□ -1.34
PUP1YOR157C SOH1P38633 127 aa6.68□□□□□ -1.34
PUP1YOR157C NOP16P40007 231 aaKnown RBP6.68□□□□□ -1.34
PUP1YOR157C TMA22P47089 198 aaPredicted RBP6.68□□□□□ -1.34
PUP1YOR157C CAB4P53332 305 aa6.68□□□□□ -1.34
PUP1YOR157C HOT1Q03213 719 aa6.68□□□□□ -1.34
PUP1YOR157C YHP1Q04116 353 aa6.68□□□□□ -1.34
PUP1YOR157C MCH1Q07376 486 aa6.68□□□□□ -1.34
PUP1YOR157C WHI5Q12416 295 aa6.68□□□□□ -1.34
PUP1YOR157C ATG40Q99325 256 aa6.68□□□□□ -1.34
PUP1YOR157C CNE1P27825 502 aa6.67□□□□□ -1.34
PUP1YOR157C MRPL49P40858 161 aaPredicted RBP6.67□□□□□ -1.34
PUP1YOR157C TOS8P53147 276 aa6.67□□□□□ -1.34
PUP1YOR157C POP6P53218 158 aa6.67□□□□□ -1.34
PUP1YOR157C BUD17P53727 317 aa6.67□□□□□ -1.34
PUP1YOR157C YLR283WQ05867 314 aa6.67□□□□□ -1.34
PUP1YOR157C HEM25Q07534 307 aa6.67□□□□□ -1.34
PUP1YOR157C PWP1P21304 576 aaKnown RBP6.66□□□□□ -1.34
PUP1YOR157C ERV1P27882 189 aa6.66□□□□□ -1.34
PUP1YOR157C ERG2P32352 222 aa6.66□□□□□ -1.34
PUP1YOR157C NDC1P32500 655 aa6.66□□□□□ -1.34
PUP1YOR157C PRS2P38620 318 aaKnown RBP6.66□□□□□ -1.34
PUP1YOR157C SWT1Q12104 458 aa6.66□□□□□ -1.34
PUP1YOR157C LYS21Q12122 440 aaKnown RBP6.66□□□□□ -1.34
PUP1YOR157C YOR192C-CQ3E736 78 aa6.66□□□□□ -1.34
PUP1YOR157C MRS4P23500 304 aa6.65□□□□□ -1.34
PUP1YOR157C ARO4P32449 370 aaKnown RBP6.65□□□□□ -1.34
PUP1YOR157C SDS22P36047 338 aa6.65□□□□□ -1.34
PUP1YOR157C YKL075CP36083 450 aa6.65□□□□□ -1.34
PUP1YOR157C AIM10P39965 576 aaKnown RBP6.65□□□□□ -1.34
PUP1YOR157C AGP3P43548 558 aa6.65□□□□□ -1.34
PUP1YOR157C ECM27P47144 725 aa6.65□□□□□ -1.34
PUP1YOR157C EFM3P47163 339 aa6.65□□□□□ -1.34
PUP1YOR157C YMD8Q03697 442 aa6.65□□□□□ -1.34
PUP1YOR157C YDR239CQ03780 787 aa6.65□□□□□ -1.34
PUP1YOR157C SMP3Q04174 516 aa6.65□□□□□ -1.34
PUP1YOR157C VCX1Q99385 411 aa6.65□□□□□ -1.34
PUP1YOR157C MRS3P10566 314 aa6.64□□□□□ -1.35
PUP1YOR157C STF2P16965 84 aa6.64□□□□□ -1.35
PUP1YOR157C MRPL36P36531 177 aa6.64□□□□□ -1.35
PUP1YOR157C SHE1P38200 338 aa6.64□□□□□ -1.35
PUP1YOR157C GIS2P53849 153 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
PUP1YOR157C YMR087WQ04299 284 aa6.64□□□□□ -1.35
PUP1YOR157C TSR2Q06672 205 aaKnown RBP6.64□□□□□ -1.35
PUP1YOR157C VMA6P32366 345 aaKnown RBP6.63□□□□□ -1.35
PUP1YOR157C PDB1P32473 366 aaKnown RBP6.63□□□□□ -1.35
PUP1YOR157C ZUO1P32527 433 aaKnown RBP6.63□□□□□ -1.35
PUP1YOR157C YKL063CP35725 167 aa6.63□□□□□ -1.35
PUP1YOR157C AVT6P40074 448 aa6.63□□□□□ -1.35
PUP1YOR157C IMD3P50095 523 aaKnown RBP6.63□□□□□ -1.35
PUP1YOR157C NMA1Q06178 401 aaKnown RBP6.63□□□□□ -1.35
PUP1YOR157C ASR1Q06834 288 aa6.63□□□□□ -1.35
PUP1YOR157C NDE2Q07500 545 aa6.63□□□□□ -1.35
PUP1YOR157C LOT6Q07923 191 aa6.63□□□□□ -1.35
PUP1YOR157C AEP3Q12089 606 aa6.63□□□□□ -1.35
PUP1YOR157C PEX4P29340 183 aa6.62□□□□□ -1.35
PUP1YOR157C NRG2P38082 220 aa6.62□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms