RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C ZRT3P34240 503 aa3.37□□□□□ -1.87
VPS21YOR089C MAL32P38158 584 aa3.37□□□□□ -1.87
VPS21YOR089C PHO89P38361 574 aa3.37□□□□□ -1.87
VPS21YOR089C ASP1P38986 381 aaPredicted RBP3.37□□□□□ -1.87
VPS21YOR089C AVT6P40074 448 aa3.37□□□□□ -1.87
VPS21YOR089C RRG9P40156 214 aa3.37□□□□□ -1.87
VPS21YOR089C SMX2P40204 77 aaKnown RBP3.37□□□□□ -1.87
VPS21YOR089C SER33P40510 469 aa3.37□□□□□ -1.87
VPS21YOR089C GLG2P47011 380 aa3.37□□□□□ -1.87
VPS21YOR089C MAL12P53341 584 aa3.37□□□□□ -1.87
VPS21YOR089C SWS2P53937 143 aa3.37□□□□□ -1.87
VPS21YOR089C YMR244WQ04018 355 aa3.37□□□□□ -1.87
VPS21YOR089C TMC1Q08422 150 aaPredicted RBP3.37□□□□□ -1.87
VPS21YOR089C RAX2Q12465 1220 aa3.37□□□□□ -1.87
VPS21YOR089C YAL067W-AQ8TGK6 75 aa3.37□□□□□ -1.87
VPS21YOR089C MOT1P32333 1867 aa3.37□□□□□ -1.87
VPS21YOR089C LAA1P39526 2014 aa3.36□□□□□ -1.87
VPS21YOR089C SNA3P14359 133 aa3.36□□□□□ -1.87
VPS21YOR089C CBF1P17106 351 aa3.36□□□□□ -1.87
VPS21YOR089C SSO1P32867 290 aa3.36□□□□□ -1.87
VPS21YOR089C VPS21P36017 210 aaKnown RBP3.36□□□□□ -1.87
VPS21YOR089C PRE6P40303 254 aaKnown RBP3.36□□□□□ -1.87
VPS21YOR089C AVT7P40501 490 aa3.36□□□□□ -1.87
VPS21YOR089C UFE1P41834 346 aa3.36□□□□□ -1.87
VPS21YOR089C SNZ3P43545 298 aa3.36□□□□□ -1.87
VPS21YOR089C SNZ2P53824 298 aa3.36□□□□□ -1.87
VPS21YOR089C GIM3P53900 129 aa3.36□□□□□ -1.87
VPS21YOR089C SDC1Q03323 175 aa3.36□□□□□ -1.87
VPS21YOR089C YMR226CQ05016 267 aaKnown RBP3.36□□□□□ -1.87
VPS21YOR089C DXO1Q06349 442 aa3.36□□□□□ -1.87
VPS21YOR089C RFM1Q12192 310 aa3.36□□□□□ -1.87
VPS21YOR089C DFM1Q12743 341 aaKnown RBP3.36□□□□□ -1.87
VPS21YOR089C SEY1Q99287 776 aa3.36□□□□□ -1.87
VPS21YOR089C ECM29P38737 1868 aa3.36□□□□□ -1.87
VPS21YOR089C THP2O13539 261 aaKnown RBP3.35□□□□□ -1.87
VPS21YOR089C RHO1P06780 209 aaKnown RBP3.35□□□□□ -1.87
VPS21YOR089C STE18P18852 110 aa3.35□□□□□ -1.87
VPS21YOR089C PHO80P20052 293 aa3.35□□□□□ -1.87
VPS21YOR089C PCL1P24867 279 aa3.35□□□□□ -1.87
VPS21YOR089C LDB16P25587 256 aa3.35□□□□□ -1.87
VPS21YOR089C SGE1P33335 543 aa3.35□□□□□ -1.87
VPS21YOR089C HEK2P38199 381 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
VPS21YOR089C POP8P38208 133 aa3.35□□□□□ -1.87
VPS21YOR089C YER184CP39961 794 aa3.35□□□□□ -1.87
VPS21YOR089C YFL012WP43580 148 aa3.35□□□□□ -1.87
VPS21YOR089C HOP2P53187 214 aa3.35□□□□□ -1.87
VPS21YOR089C TLG1Q03322 224 aa3.35□□□□□ -1.87
VPS21YOR089C CDD1Q06549 142 aa3.35□□□□□ -1.87
VPS21YOR089C RIF1P29539 1916 aa3.34□□□□□ -1.87
VPS21YOR089C YBR121C-AP0C5L4 52 aa3.34□□□□□ -1.87
VPS21YOR089C ATG15P25641 520 aa3.34□□□□□ -1.87
VPS21YOR089C ERG2P32352 222 aa3.34□□□□□ -1.87
VPS21YOR089C MRPS9P38120 278 aa3.34□□□□□ -1.87
VPS21YOR089C TVP23P38962 199 aa3.34□□□□□ -1.87
VPS21YOR089C RHO3Q00245 231 aaKnown RBP3.34□□□□□ -1.87
VPS21YOR089C MZM1Q03429 123 aaPredicted RBP3.34□□□□□ -1.87
VPS21YOR089C ARO80Q04052 950 aa3.34□□□□□ -1.87
VPS21YOR089C NNT1Q05874 261 aa3.34□□□□□ -1.87
VPS21YOR089C DCR2Q05924 578 aa3.34□□□□□ -1.87
VPS21YOR089C SSQ1Q05931 657 aaPredicted RBP3.34□□□□□ -1.87
VPS21YOR089C EMP46Q12396 444 aa3.34□□□□□ -1.87
VPS21YOR089C JIP3O13555 125 aa3.33□□□□□ -1.88
VPS21YOR089C QCR6P00127 147 aa3.33□□□□□ -1.88
VPS21YOR089C CDC36P06100 191 aaPredicted RBP3.33□□□□□ -1.88
VPS21YOR089C ARG80P07249 177 aa3.33□□□□□ -1.88
VPS21YOR089C MRPL39P36533 70 aa3.33□□□□□ -1.88
VPS21YOR089C YBR032WP38223 100 aa3.33□□□□□ -1.88
VPS21YOR089C POP4P38336 279 aa3.33□□□□□ -1.88
VPS21YOR089C YHL026CP38740 315 aa3.33□□□□□ -1.88
VPS21YOR089C FRT2P39734 528 aa3.33□□□□□ -1.88
VPS21YOR089C RPE1P46969 238 aa3.33□□□□□ -1.88
VPS21YOR089C JHD2P47156 728 aaPredicted RBP3.33□□□□□ -1.88
VPS21YOR089C COQ5P49017 307 aa3.33□□□□□ -1.88
VPS21YOR089C CAX4P53223 239 aa3.33□□□□□ -1.88
VPS21YOR089C RSM27P53305 110 aa3.33□□□□□ -1.88
VPS21YOR089C ZRG17P53735 605 aa3.33□□□□□ -1.88
VPS21YOR089C YNL247WP53852 767 aaKnown RBP3.33□□□□□ -1.88
VPS21YOR089C FAR8Q05040 523 aa3.33□□□□□ -1.88
VPS21YOR089C ATG38Q05789 226 aaKnown RBP3.33□□□□□ -1.88
VPS21YOR089C ECM19Q06011 112 aa3.33□□□□□ -1.88
VPS21YOR089C YPR147CQ06522 304 aaKnown RBP3.33□□□□□ -1.88
VPS21YOR089C CDC10P25342 322 aaKnown RBP3.32□□□□□ -1.88
VPS21YOR089C RSA4P25382 515 aaKnown RBP3.32□□□□□ -1.88
VPS21YOR089C MGT1P26188 188 aa3.32□□□□□ -1.88
VPS21YOR089C MEI4P29467 408 aa3.32□□□□□ -1.88
VPS21YOR089C KDX1P36005 433 aa3.32□□□□□ -1.88
VPS21YOR089C UTH1P36135 365 aa3.32□□□□□ -1.88
VPS21YOR089C DRE2P36152 348 aa3.32□□□□□ -1.88
VPS21YOR089C MIC12P38341 106 aa3.32□□□□□ -1.88
VPS21YOR089C SWT21P53873 357 aaPredicted RBP3.32□□□□□ -1.88
VPS21YOR089C FMP41P53889 259 aaKnown RBP3.32□□□□□ -1.88
VPS21YOR089C AAH1P53909 347 aa3.32□□□□□ -1.88
VPS21YOR089C MRPS17Q03246 237 aaPredicted RBP3.32□□□□□ -1.88
VPS21YOR089C MRX8Q05473 314 aa3.32□□□□□ -1.88
VPS21YOR089C ADH1P00330 348 aaKnown RBP3.31□□□□□ -1.88
VPS21YOR089C CMD1P06787 147 aaKnown RBP3.31□□□□□ -1.88
VPS21YOR089C YKR104WP0CE69 306 aa3.31□□□□□ -1.88
VPS21YOR089C YMR31P19955 123 aa3.31□□□□□ -1.88
VPS21YOR089C YCR025CP25352 136 aa3.31□□□□□ -1.88
VPS21YOR089C PRP18P33411 251 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms