RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W MRPL50P53724 139 aa1.91□□□□□ -2.1
SRP1YNL189W YPR172WQ06608 200 aa1.91□□□□□ -2.1
SRP1YNL189W YHL026CP38740 315 aa1.91□□□□□ -2.1
SRP1YNL189W YHR125WP38831 101 aa1.91□□□□□ -2.1
SRP1YNL189W MRPL49P40858 161 aaPredicted RBP1.91□□□□□ -2.1
SRP1YNL189W RAD17P48581 401 aa1.91□□□□□ -2.1
SRP1YNL189W CGI121Q03705 181 aaKnown RBP1.91□□□□□ -2.1
SRP1YNL189W ERD2P18414 219 aa1.9□□□□□ -2.11
SRP1YNL189W RAD51P25454 400 aa1.9□□□□□ -2.11
SRP1YNL189W DOA4P32571 926 aa1.9□□□□□ -2.11
SRP1YNL189W YKT6P36015 200 aaKnown RBP1.9□□□□□ -2.11
SRP1YNL189W COS8P38723 381 aa1.9□□□□□ -2.11
SRP1YNL189W FCY21P40039 528 aa1.9□□□□□ -2.11
SRP1YNL189W MNN5P46982 586 aa1.9□□□□□ -2.11
SRP1YNL189W SNX4P47057 423 aa1.9□□□□□ -2.11
SRP1YNL189W KRE28Q04431 385 aa1.9□□□□□ -2.11
SRP1YNL189W GIS3Q12418 502 aa1.9□□□□□ -2.11
SRP1YNL189W ADF1Q2V2Q1 113 aa1.9□□□□□ -2.11
SRP1YNL189W JIP3O13555 125 aa1.89□□□□□ -2.11
SRP1YNL189W COX5AP00424 153 aa1.89□□□□□ -2.11
SRP1YNL189W Q0255P03881 472 aa1.89□□□□□ -2.11
SRP1YNL189W YER085CP40058 173 aa1.89□□□□□ -2.11
SRP1YNL189W RTR1P40084 226 aaPredicted RBP1.89□□□□□ -2.11
SRP1YNL189W MSS2P40990 351 aa1.89□□□□□ -2.11
SRP1YNL189W OTU1P43558 301 aa1.89□□□□□ -2.11
SRP1YNL189W YJL027CP47063 138 aaPredicted RBP1.89□□□□□ -2.11
SRP1YNL189W LIA1P47120 325 aaKnown RBP1.89□□□□□ -2.11
SRP1YNL189W NOP13P53883 403 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
SRP1YNL189W INM2Q05533 292 aa1.89□□□□□ -2.11
SRP1YNL189W RUD3Q12234 484 aaKnown RBP1.89□□□□□ -2.11
SRP1YNL189W IPP1P00817 287 aaKnown RBP1.88□□□□□ -2.11
SRP1YNL189W SCM4P32564 187 aa1.88□□□□□ -2.11
SRP1YNL189W YOR062CP36025 268 aa1.88□□□□□ -2.11
SRP1YNL189W ARC15P40518 154 aaRIP-Chip data1.88□□□□□ -2.11not detected
SRP1YNL189W GCN20P43535 752 aaKnown RBP1.88□□□□□ -2.11
SRP1YNL189W TRM9P49957 279 aa1.88□□□□□ -2.11
SRP1YNL189W TOS8P53147 276 aa1.88□□□□□ -2.11
SRP1YNL189W FAR8Q05040 523 aa1.88□□□□□ -2.11
SRP1YNL189W RHO1P06780 209 aaKnown RBP1.88□□□□□ -2.11
SRP1YNL189W DSF1P0CX08 502 aa1.88□□□□□ -2.11
SRP1YNL189W YNR073CP0CX09 502 aa1.88□□□□□ -2.11
SRP1YNL189W SNA3P14359 133 aa1.88□□□□□ -2.11
SRP1YNL189W MRPL25P23369 157 aa1.88□□□□□ -2.11
SRP1YNL189W NTF2P33331 125 aaKnown RBP1.88□□□□□ -2.11
SRP1YNL189W GRE3P38715 327 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
SRP1YNL189W GTR2P53290 341 aa1.88□□□□□ -2.11
SRP1YNL189W CWC21Q03375 135 aaKnown RBP1.88□□□□□ -2.11
SRP1YNL189W YLR283WQ05867 314 aa1.88□□□□□ -2.11
SRP1YNL189W DCR2Q05924 578 aa1.88□□□□□ -2.11
SRP1YNL189W YHR086W-AQ3E746 53 aa1.88□□□□□ -2.11
SRP1YNL189W CCA1P21269 546 aa1.87□□□□□ -2.11
SRP1YNL189W NTG1P31378 399 aa1.87□□□□□ -2.11
SRP1YNL189W SRB4P32569 687 aa1.87□□□□□ -2.11
SRP1YNL189W RTC3P38804 111 aaPredicted RBP1.87□□□□□ -2.11
SRP1YNL189W YMR144WP40214 342 aaKnown RBP1.87□□□□□ -2.11
SRP1YNL189W CAT5P41735 233 aa1.87□□□□□ -2.11
SRP1YNL189W RPA43P46669 326 aa1.87□□□□□ -2.11
SRP1YNL189W YJR149WP47177 404 aa1.87□□□□□ -2.11
SRP1YNL189W NIP7Q08962 181 aaKnown RBP1.87□□□□□ -2.11
SRP1YNL189W YPL257WQ08974 193 aa1.87□□□□□ -2.11
SRP1YNL189W EMC6Q12431 108 aa1.87□□□□□ -2.11
SRP1YNL189W QCR6P00127 147 aa1.86□□□□□ -2.11
SRP1YNL189W CDC36P06100 191 aaPredicted RBP1.86□□□□□ -2.11
SRP1YNL189W MER1P16523 270 aa1.86□□□□□ -2.11
SRP1YNL189W CDC10P25342 322 aaKnown RBP1.86□□□□□ -2.11
SRP1YNL189W YPT52P36018 234 aaKnown RBP1.86□□□□□ -2.11
SRP1YNL189W RPC17P47076 161 aa1.86□□□□□ -2.11
SRP1YNL189W RPB4P20433 221 aaPredicted RBP1.85□□□□□ -2.11
SRP1YNL189W BMH2P34730 273 aaKnown RBP1.85□□□□□ -2.11
SRP1YNL189W VPS21P36017 210 aaKnown RBP1.85□□□□□ -2.11
SRP1YNL189W MIC12P38341 106 aa1.85□□□□□ -2.11
SRP1YNL189W MHT1Q12525 324 aa1.85□□□□□ -2.11
SRP1YNL189W HTL1Q9URQ5 78 aa1.85□□□□□ -2.11
SRP1YNL189W SIR4P11978 1358 aa1.85□□□□□ -2.11
SRP1YNL189W RAS2P01120 322 aaKnown RBP1.84□□□□□ -2.11
SRP1YNL189W APA2P22108 325 aa1.84□□□□□ -2.11
SRP1YNL189W ASF2P32448 525 aaPredicted RBP1.84□□□□□ -2.11
SRP1YNL189W NRG2P38082 220 aa1.84□□□□□ -2.11
SRP1YNL189W CUE1P38428 203 aa1.84□□□□□ -2.11
SRP1YNL189W URA8P38627 578 aaPredicted RBP1.84□□□□□ -2.11
SRP1YNL189W PEX17P40155 199 aa1.84□□□□□ -2.11
SRP1YNL189W PGA2P53903 129 aa1.84□□□□□ -2.11
SRP1YNL189W ATG39Q06159 398 aa1.84□□□□□ -2.11
SRP1YNL189W AKR2Q12013 749 aa1.84□□□□□ -2.11
SRP1YNL189W YOR283WQ12040 230 aaKnown RBP1.84□□□□□ -2.11
SRP1YNL189W RIB1P38066 345 aa1.84□□□□□ -2.12
SRP1YNL189W FIS1P40515 155 aa1.84□□□□□ -2.12
SRP1YNL189W MRPS17Q03246 237 aaPredicted RBP1.84□□□□□ -2.12
SRP1YNL189W THP2O13539 261 aaKnown RBP1.83□□□□□ -2.12
SRP1YNL189W CDC33P07260 213 aaKnown RBP1.83□□□□□ -2.12
SRP1YNL189W SRY1P36007 326 aa1.83□□□□□ -2.12
SRP1YNL189W ECM33P38248 429 aaKnown RBP1.83□□□□□ -2.12
SRP1YNL189W RPF1P38805 295 aaKnown RBP1.83□□□□□ -2.12
SRP1YNL189W RMR1P53060 241 aa1.83□□□□□ -2.12
SRP1YNL189W ALG13P53178 202 aa1.83□□□□□ -2.12
SRP1YNL189W ERV29P53337 310 aa1.83□□□□□ -2.12
SRP1YNL189W SNZ1Q03148 297 aa1.83□□□□□ -2.12
SRP1YNL189W YMR279CQ03263 540 aa1.83□□□□□ -2.12
SRP1YNL189W ATG38Q05789 226 aaKnown RBP1.83□□□□□ -2.12
SRP1YNL189W YKL183C-AQ3E765 70 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 154.1 ms