RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A GCN20P43535 752 aaKnown RBP2.58□□□□□ -2
YSF3YNL138W-A MOB2P43563 287 aa2.58□□□□□ -2
YSF3YNL138W-A LOC1P43586 204 aaPredicted RBP2.58□□□□□ -2
YSF3YNL138W-A LIA1P47120 325 aaKnown RBP2.58□□□□□ -2
YSF3YNL138W-A ABZ2Q03266 374 aa2.58□□□□□ -2
YSF3YNL138W-A CDC123Q05791 360 aa2.58□□□□□ -2
YSF3YNL138W-A BUR2Q05949 395 aa2.58□□□□□ -2
YSF3YNL138W-A RAX2Q12465 1220 aa2.58□□□□□ -2
YSF3YNL138W-A CBP2P03874 630 aaPredicted RBP2.57□□□□□ -2
YSF3YNL138W-A UTR1P21373 530 aa2.57□□□□□ -2
YSF3YNL138W-A MIR1P23641 311 aaKnown RBP2.57□□□□□ -2
YSF3YNL138W-A RPS5P26783 225 aaKnown RBP2.57□□□□□ -2
YSF3YNL138W-A SRB4P32569 687 aa2.57□□□□□ -2
YSF3YNL138W-A CBF5P33322 483 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
YSF3YNL138W-A COS9P36034 407 aa2.57□□□□□ -2
YSF3YNL138W-A SMP1P38128 452 aa2.57□□□□□ -2
YSF3YNL138W-A CHL4P38907 458 aa2.57□□□□□ -2
YSF3YNL138W-A SSO2P39926 295 aa2.57□□□□□ -2
YSF3YNL138W-A YER034WP40022 185 aaKnown RBP2.57□□□□□ -2
YSF3YNL138W-A YMR134WP40207 237 aa2.57□□□□□ -2
YSF3YNL138W-A YIL001WP40560 513 aa2.57□□□□□ -2
YSF3YNL138W-A YFR054CP43622 192 aa2.57□□□□□ -2
YSF3YNL138W-A RNH201P53942 307 aa2.57□□□□□ -2
YSF3YNL138W-A SLT2Q00772 484 aa2.57□□□□□ -2
YSF3YNL138W-A FRE8Q12209 686 aa2.57□□□□□ -2
YSF3YNL138W-A TIR4Q12218 487 aaPredicted RBP2.57□□□□□ -2
YSF3YNL138W-A MHT1Q12525 324 aa2.57□□□□□ -2
YSF3YNL138W-A VPS63O13549 108 aa2.56□□□□□ -2
YSF3YNL138W-A RAD1P06777 1100 aa2.56□□□□□ -2
YSF3YNL138W-A YAK1P14680 807 aa2.56□□□□□ -2
YSF3YNL138W-A MIG1P27705 504 aa2.56□□□□□ -2
YSF3YNL138W-A YUH1P35127 236 aa2.56□□□□□ -2
YSF3YNL138W-A YKR015CP36111 568 aa2.56□□□□□ -2
YSF3YNL138W-A FIG1P38224 298 aa2.56□□□□□ -2
YSF3YNL138W-A SPO73P40031 143 aa2.56□□□□□ -2
YSF3YNL138W-A HYR1P40581 163 aaKnown RBP2.56□□□□□ -2
YSF3YNL138W-A YRB1P41920 201 aaKnown RBP2.56□□□□□ -2
YSF3YNL138W-A LST7P53237 242 aa2.56□□□□□ -2
YSF3YNL138W-A RMI1Q02685 241 aa2.56□□□□□ -2
YSF3YNL138W-A NCE101Q02820 53 aa2.56□□□□□ -2
YSF3YNL138W-A MRX11Q03079 207 aa2.56□□□□□ -2
YSF3YNL138W-A SNX41Q04053 625 aa2.56□□□□□ -2
YSF3YNL138W-A RGS2Q99188 309 aa2.56□□□□□ -2
YSF3YNL138W-A UBA3Q99344 299 aa2.56□□□□□ -2
YSF3YNL138W-A RHO1P06780 209 aaKnown RBP2.55□□□□□ -2
YSF3YNL138W-A GCG1P32656 232 aaKnown RBP2.55□□□□□ -2
YSF3YNL138W-A SHE1P38200 338 aa2.55□□□□□ -2
YSF3YNL138W-A PEX18P38855 283 aa2.55□□□□□ -2
YSF3YNL138W-A MNN9P39107 395 aaKnown RBP2.55□□□□□ -2
YSF3YNL138W-A YER184CP39961 794 aa2.55□□□□□ -2
YSF3YNL138W-A GLR1P41921 483 aaKnown RBP2.55□□□□□ -2
YSF3YNL138W-A STB1P42845 420 aa2.55□□□□□ -2
YSF3YNL138W-A AGX1P43567 385 aa2.55□□□□□ -2
YSF3YNL138W-A ADO1P47143 340 aaKnown RBP2.55□□□□□ -2
YSF3YNL138W-A SIP18P50263 79 aa2.55□□□□□ -2
YSF3YNL138W-A TAF6P53040 516 aa2.55□□□□□ -2
YSF3YNL138W-A YPL039WQ03080 316 aa2.55□□□□□ -2
YSF3YNL138W-A YLR413WQ06689 675 aa2.55□□□□□ -2
YSF3YNL138W-A TPI1P00942 248 aaKnown RBP2.54□□□□□ -2
YSF3YNL138W-A RPB4P20433 221 aaPredicted RBP2.54□□□□□ -2
YSF3YNL138W-A YRA2P36036 203 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
YSF3YNL138W-A NSG1P38837 291 aa2.54□□□□□ -2
YSF3YNL138W-A LIN1P38852 340 aaPredicted RBP2.54□□□□□ -2
YSF3YNL138W-A RBG1P39729 369 aa2.54□□□□□ -2
YSF3YNL138W-A YER084WP40057 128 aa2.54□□□□□ -2
YSF3YNL138W-A AIM20P40451 204 aa2.54□□□□□ -2
YSF3YNL138W-A GCD14P46959 383 aaPredicted RBP2.54□□□□□ -2
YSF3YNL138W-A RCE1Q03530 315 aa2.54□□□□□ -2
YSF3YNL138W-A INP1Q03694 420 aa2.54□□□□□ -2
YSF3YNL138W-A ECM18Q04623 453 aa2.54□□□□□ -2
YSF3YNL138W-A NAT4Q04751 285 aa2.54□□□□□ -2
YSF3YNL138W-A RDL2Q08742 149 aaKnown RBP2.54□□□□□ -2
YSF3YNL138W-A YCL048W-AQ2V2Q2 79 aa2.54□□□□□ -2
YSF3YNL138W-A SPT3P06844 337 aa2.53□□□□□ -2
YSF3YNL138W-A RPL35AP0CX84 120 aaKnown RBP2.53□□□□□ -2
YSF3YNL138W-A RPL35BP0CX85 120 aaKnown RBP2.53□□□□□ -2
YSF3YNL138W-A UGA1P17649 471 aa2.53□□□□□ -2
YSF3YNL138W-A SAR1P20606 190 aaKnown RBP2.53□□□□□ -2
YSF3YNL138W-A SCO1P23833 295 aa2.53□□□□□ -2
YSF3YNL138W-A PBN1P25580 416 aa2.53□□□□□ -2
YSF3YNL138W-A MGT1P26188 188 aa2.53□□□□□ -2
YSF3YNL138W-A EHD3P28817 500 aa2.53□□□□□ -2
YSF3YNL138W-A CLG1P35190 452 aa2.53□□□□□ -2
YSF3YNL138W-A IST2P38250 946 aa2.53□□□□□ -2
YSF3YNL138W-A AIM2P39721 246 aa2.53□□□□□ -2
YSF3YNL138W-A RRT13P40042 185 aa2.53□□□□□ -2
YSF3YNL138W-A RFC4P40339 323 aaKnown RBP2.53□□□□□ -2
YSF3YNL138W-A MIC19P43594 170 aa2.53□□□□□ -2
YSF3YNL138W-A LSG1P53145 640 aaKnown RBP2.53□□□□□ -2
YSF3YNL138W-A VOA1P53262 265 aa2.53□□□□□ -2
YSF3YNL138W-A YNL140CP53910 189 aa2.53□□□□□ -2
YSF3YNL138W-A NHP10Q03435 203 aa2.53□□□□□ -2
YSF3YNL138W-A SCS7Q03529 384 aa2.53□□□□□ -2
YSF3YNL138W-A CAB5Q03941 241 aa2.53□□□□□ -2
YSF3YNL138W-A ATC1Q04005 294 aa2.53□□□□□ -2
YSF3YNL138W-A COX20Q04935 205 aa2.53□□□□□ -2
YSF3YNL138W-A ATG38Q05789 226 aaKnown RBP2.53□□□□□ -2
YSF3YNL138W-A GRE1Q08969 168 aa2.53□□□□□ -2
YSF3YNL138W-A MED4Q12343 284 aa2.53□□□□□ -2
YSF3YNL138W-A YPL247CQ12523 523 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 209.3 ms