RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C EFM5P53200 248 aaKnown RBP3.42□□□□□ -1.86
VPS71YML041C PDR17P53844 350 aa3.42□□□□□ -1.86
VPS71YML041C SMD2Q06217 110 aaKnown RBP3.42□□□□□ -1.86
VPS71YML041C SMT3Q12306 101 aaKnown RBP3.42□□□□□ -1.86
VPS71YML041C MRX4Q12467 430 aa3.42□□□□□ -1.86
VPS71YML041C LSO2Q3E772 92 aaKnown RBP3.42□□□□□ -1.86
VPS71YML041C COX5AP00424 153 aa3.41□□□□□ -1.86
VPS71YML041C YJL016WP47072 561 aa3.41□□□□□ -1.86
VPS71YML041C GIS2P53849 153 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
VPS71YML041C CDD1Q06549 142 aa3.41□□□□□ -1.86
VPS71YML041C YDL211CQ12121 372 aa3.41□□□□□ -1.86
VPS71YML041C ATG5Q12380 294 aa3.41□□□□□ -1.86
VPS71YML041C ISD11Q6Q560 94 aa3.41□□□□□ -1.86
VPS71YML041C AUS1Q08409 1394 aa3.4□□□□□ -1.86
VPS71YML041C MET2P08465 486 aa3.4□□□□□ -1.87
VPS71YML041C GCN3P14741 305 aa3.4□□□□□ -1.87
VPS71YML041C SNF6P18888 332 aa3.4□□□□□ -1.87
VPS71YML041C CAF4P36130 643 aa3.4□□□□□ -1.87
VPS71YML041C SHG1P38337 142 aa3.4□□□□□ -1.87
VPS71YML041C YER189WP40104 122 aa3.4□□□□□ -1.87
VPS71YML041C FAR7P43592 221 aa3.4□□□□□ -1.87
VPS71YML041C COQ5P49017 307 aa3.4□□□□□ -1.87
VPS71YML041C SLD7Q08457 257 aa3.4□□□□□ -1.87
VPS71YML041C CDC28P00546 298 aaKnown RBP3.39□□□□□ -1.87
VPS71YML041C FBA1P14540 359 aaKnown RBP3.39□□□□□ -1.87
VPS71YML041C TRM7P38238 310 aaKnown RBP3.39□□□□□ -1.87
VPS71YML041C GRE3P38715 327 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
VPS71YML041C SUR2P38992 349 aa3.39□□□□□ -1.87
VPS71YML041C YFL012WP43580 148 aa3.39□□□□□ -1.87
VPS71YML041C TOS8P53147 276 aa3.39□□□□□ -1.87
VPS71YML041C MMS2P53152 137 aa3.39□□□□□ -1.87
VPS71YML041C SMD1Q02260 146 aaPredicted RBP3.39□□□□□ -1.87
VPS71YML041C YMR279CQ03263 540 aa3.39□□□□□ -1.87
VPS71YML041C YDR248CQ03786 193 aa3.39□□□□□ -1.87
VPS71YML041C MRX8Q05473 314 aa3.39□□□□□ -1.87
VPS71YML041C FUS2Q05670 677 aa3.39□□□□□ -1.87
VPS71YML041C PST1Q12355 444 aa3.39□□□□□ -1.87
VPS71YML041C FLO11P08640 1367 aa3.38□□□□□ -1.87
VPS71YML041C NUP157P40064 1391 aaKnown RBP3.38□□□□□ -1.87
VPS71YML041C DBF2P22204 572 aa3.38□□□□□ -1.87
VPS71YML041C SFC1P33303 322 aa3.38□□□□□ -1.87
VPS71YML041C YPT52P36018 234 aaKnown RBP3.38□□□□□ -1.87
VPS71YML041C MRPS9P38120 278 aa3.38□□□□□ -1.87
VPS71YML041C SPL2P38839 148 aa3.38□□□□□ -1.87
VPS71YML041C BDH1P39714 382 aa3.38□□□□□ -1.87
VPS71YML041C PEX17P40155 199 aa3.38□□□□□ -1.87
VPS71YML041C YJL028WP47062 111 aa3.38□□□□□ -1.87
VPS71YML041C YJR056CP47115 236 aa3.38□□□□□ -1.87
VPS71YML041C DID2P69771 204 aa3.38□□□□□ -1.87
VPS71YML041C OSH6Q02201 448 aa3.38□□□□□ -1.87
VPS71YML041C YPL264CQ08980 353 aa3.38□□□□□ -1.87
VPS71YML041C IPP1P00817 287 aaKnown RBP3.37□□□□□ -1.87
VPS71YML041C YAK1P14680 807 aa3.37□□□□□ -1.87
VPS71YML041C CUP2P15315 225 aa3.37□□□□□ -1.87
VPS71YML041C PRE7P23724 241 aaKnown RBP3.37□□□□□ -1.87
VPS71YML041C APS1P35181 156 aa3.37□□□□□ -1.87
VPS71YML041C SRY1P36007 326 aa3.37□□□□□ -1.87
VPS71YML041C MRPL28P36527 147 aa3.37□□□□□ -1.87
VPS71YML041C POG1P40473 351 aa3.37□□□□□ -1.87
VPS71YML041C ERG10P41338 398 aaKnown RBP3.37□□□□□ -1.87
VPS71YML041C PRM8P53174 237 aa3.37□□□□□ -1.87
VPS71YML041C ABF2Q02486 183 aa3.37□□□□□ -1.87
VPS71YML041C INM2Q05533 292 aa3.37□□□□□ -1.87
VPS71YML041C YNG1Q08465 219 aa3.37□□□□□ -1.87
VPS71YML041C EMP46Q12396 444 aa3.37□□□□□ -1.87
VPS71YML041C YLR462WO13556 202 aa3.36□□□□□ -1.87
VPS71YML041C YOL163WP0CF20 169 aa3.36□□□□□ -1.87
VPS71YML041C CPT1P17898 393 aa3.36□□□□□ -1.87
VPS71YML041C SPS18P32572 300 aa3.36□□□□□ -1.87
VPS71YML041C ECM13P38195 257 aa3.36□□□□□ -1.87
VPS71YML041C ECM14P38836 430 aa3.36□□□□□ -1.87
VPS71YML041C YEL075CP39972 122 aa3.36□□□□□ -1.87
VPS71YML041C SYF2P53277 215 aaPredicted RBP3.36□□□□□ -1.87
VPS71YML041C RTC4P53850 401 aa3.36□□□□□ -1.87
VPS71YML041C YPL039WQ03080 316 aa3.36□□□□□ -1.87
VPS71YML041C PRM15Q03262 622 aa3.36□□□□□ -1.87
VPS71YML041C MDM32Q12171 622 aa3.36□□□□□ -1.87
VPS71YML041C YPR011CQ12251 326 aa3.36□□□□□ -1.87
VPS71YML041C TIM22Q12328 207 aa3.36□□□□□ -1.87
VPS71YML041C IES3Q12345 250 aa3.36□□□□□ -1.87
VPS71YML041C HTL1Q9URQ5 78 aa3.36□□□□□ -1.87
VPS71YML041C RPL35AP0CX84 120 aaKnown RBP3.35□□□□□ -1.87
VPS71YML041C RPL35BP0CX85 120 aaKnown RBP3.35□□□□□ -1.87
VPS71YML041C RNP1P32385 249 aa3.35□□□□□ -1.87
VPS71YML041C YBL081WP38180 368 aaKnown RBP3.35□□□□□ -1.87
VPS71YML041C TRR2P38816 342 aa3.35□□□□□ -1.87
VPS71YML041C CAT5P41735 233 aa3.35□□□□□ -1.87
VPS71YML041C YGL159WP53110 370 aa3.35□□□□□ -1.87
VPS71YML041C YGL034CP53186 121 aa3.35□□□□□ -1.87
VPS71YML041C HST4P53688 370 aa3.35□□□□□ -1.87
VPS71YML041C EMI1Q04406 187 aa3.35□□□□□ -1.87
VPS71YML041C YML096WQ04489 525 aa3.35□□□□□ -1.87
VPS71YML041C IKI3Q06706 1349 aaKnown RBP3.35□□□□□ -1.87
VPS71YML041C TRR1P29509 319 aaKnown RBP3.34□□□□□ -1.87
VPS71YML041C RME1P32338 300 aaKnown RBP3.34□□□□□ -1.87
VPS71YML041C MID2P36027 376 aa3.34□□□□□ -1.87
VPS71YML041C ECM33P38248 429 aaKnown RBP3.34□□□□□ -1.87
VPS71YML041C ERV29P53337 310 aa3.34□□□□□ -1.87
VPS71YML041C YMD8Q03697 442 aa3.34□□□□□ -1.87
VPS71YML041C YPL257WQ08974 193 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 117.9 ms