RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C RPL25P04456 142 aaKnown RBP7.95□□□□□ -1.14
SEC61YLR378C HEM4P06174 275 aa7.95□□□□□ -1.14
SEC61YLR378C PUT1P09368 476 aa7.95□□□□□ -1.14
SEC61YLR378C YCR101CP25607 182 aa7.95□□□□□ -1.14
SEC61YLR378C SUA5P32579 426 aa7.95□□□□□ -1.14
SEC61YLR378C MCH2P36032 473 aa7.95□□□□□ -1.14
SEC61YLR378C GLY1P37303 387 aaKnown RBP7.95□□□□□ -1.14
SEC61YLR378C ARC40P38328 384 aaKnown RBP7.95□□□□□ -1.14
SEC61YLR378C AIM46P38885 310 aa7.95□□□□□ -1.14
SEC61YLR378C SIT1P39980 628 aa7.95□□□□□ -1.14
SEC61YLR378C YJR011CP47086 261 aaPredicted RBP7.95□□□□□ -1.14
SEC61YLR378C SSN8P47821 323 aa7.95□□□□□ -1.14
SEC61YLR378C SRP1Q02821 542 aaKnown RBP7.95□□□□□ -1.14
SEC61YLR378C CAB5Q03941 241 aa7.95□□□□□ -1.14
SEC61YLR378C ORM2Q06144 216 aa7.95□□□□□ -1.14
SEC61YLR378C SYM1Q06563 197 aa7.95□□□□□ -1.14
SEC61YLR378C YDL218WQ07629 317 aa7.95□□□□□ -1.14
SEC61YLR378C YBR298C-AQ8TGK4 73 aa7.95□□□□□ -1.14
SEC61YLR378C CDC39P25655 2108 aaKnown RBP7.94□□□□□ -1.14
SEC61YLR378C CKS1P20486 150 aaKnown RBP7.94□□□□□ -1.14
SEC61YLR378C REC114P32841 428 aa7.94□□□□□ -1.14
SEC61YLR378C MRPL36P36531 177 aa7.94□□□□□ -1.14
SEC61YLR378C YER084WP40057 128 aa7.94□□□□□ -1.14
SEC61YLR378C YIL029CP40538 142 aa7.94□□□□□ -1.14
SEC61YLR378C SNX4P47057 423 aa7.94□□□□□ -1.14
SEC61YLR378C SCP1Q08873 200 aa7.94□□□□□ -1.14
SEC61YLR378C HUT1Q12520 339 aa7.94□□□□□ -1.14
SEC61YLR378C UBA3Q99344 299 aa7.94□□□□□ -1.14
SEC61YLR378C NAT2P37293 288 aa7.93□□□□□ -1.14
SEC61YLR378C POP8P38208 133 aa7.93□□□□□ -1.14
SEC61YLR378C LAG1P38703 411 aa7.93□□□□□ -1.14
SEC61YLR378C COS8P38723 381 aa7.93□□□□□ -1.14
SEC61YLR378C SIP18P50263 79 aa7.93□□□□□ -1.14
SEC61YLR378C OKP1P53298 406 aa7.93□□□□□ -1.14
SEC61YLR378C FIT3Q08907 204 aa7.93□□□□□ -1.14
SEC61YLR378C FEX1Q08913 375 aa7.93□□□□□ -1.14
SEC61YLR378C VAM3Q12241 283 aa7.93□□□□□ -1.14
SEC61YLR378C COX17Q12287 69 aa7.93□□□□□ -1.14
SEC61YLR378C MED4Q12343 284 aa7.93□□□□□ -1.14
SEC61YLR378C FOL3Q12676 427 aaPredicted RBP7.93□□□□□ -1.14
SEC61YLR378C MET3P08536 511 aa7.92□□□□□ -1.14
SEC61YLR378C MSI1P13712 422 aa7.92□□□□□ -1.14
SEC61YLR378C SAG1P20840 650 aa7.92□□□□□ -1.14
SEC61YLR378C TRR1P29509 319 aaKnown RBP7.92□□□□□ -1.14
SEC61YLR378C YBR197CP38306 217 aa7.92□□□□□ -1.14
SEC61YLR378C VMA7P39111 118 aa7.92□□□□□ -1.14
SEC61YLR378C FLX1P40464 311 aa7.92□□□□□ -1.14
SEC61YLR378C MID1P41821 548 aa7.92□□□□□ -1.14
SEC61YLR378C JAC1P53193 184 aa7.92□□□□□ -1.14
SEC61YLR378C YPR098CQ06089 161 aa7.92□□□□□ -1.14
SEC61YLR378C YOR186WQ08560 144 aa7.92□□□□□ -1.14
SEC61YLR378C RRS1Q08746 203 aaKnown RBP7.92□□□□□ -1.14
SEC61YLR378C REP2P03872 296 aa7.91□□□□□ -1.14
SEC61YLR378C ATG15P25641 520 aa7.91□□□□□ -1.14
SEC61YLR378C VMA8P32610 256 aaKnown RBP7.91□□□□□ -1.14
SEC61YLR378C CLB6P32943 380 aa7.91□□□□□ -1.14
SEC61YLR378C YPC1P38298 316 aa7.91□□□□□ -1.14
SEC61YLR378C YER079WP40052 210 aaKnown RBP7.91□□□□□ -1.14
SEC61YLR378C PIG2P40187 538 aa7.91□□□□□ -1.14
SEC61YLR378C GWT1P47026 490 aa7.91□□□□□ -1.14
SEC61YLR378C NIF3P53081 288 aa7.91□□□□□ -1.14
SEC61YLR378C RTT103Q05543 409 aa7.91□□□□□ -1.14
SEC61YLR378C EAF3Q12432 401 aa7.91□□□□□ -1.14
SEC61YLR378C YGL194C-AQ2V2P6 80 aa7.91□□□□□ -1.14
SEC61YLR378C GAL1P04385 528 aa7.9□□□□□ -1.14
SEC61YLR378C OLE1P21147 510 aaKnown RBP7.9□□□□□ -1.14
SEC61YLR378C YCR061WP25639 631 aa7.9□□□□□ -1.14
SEC61YLR378C PEX4P29340 183 aa7.9□□□□□ -1.14
SEC61YLR378C PTI1P39927 425 aaPredicted RBP7.9□□□□□ -1.14
SEC61YLR378C YMR144WP40214 342 aaKnown RBP7.9□□□□□ -1.14
SEC61YLR378C ALG12P53730 551 aa7.9□□□□□ -1.14
SEC61YLR378C ACS1Q01574 713 aa7.9□□□□□ -1.14
SEC61YLR378C YPL077CQ02831 240 aa7.9□□□□□ -1.14
SEC61YLR378C HAS1Q03532 505 aaKnown RBP7.9□□□□□ -1.14
SEC61YLR378C DLT1Q04216 342 aa7.9□□□□□ -1.14
SEC61YLR378C PIN3Q06449 215 aa7.9□□□□□ -1.14
SEC61YLR378C BBP1Q12365 385 aa7.9□□□□□ -1.14
SEC61YLR378C ATG31Q12421 196 aa7.9□□□□□ -1.14
SEC61YLR378C FMP16Q12497 93 aa7.9□□□□□ -1.14
SEC61YLR378C CKA1P15790 372 aa7.89□□□□□ -1.15
SEC61YLR378C FIG1P38224 298 aa7.89□□□□□ -1.15
SEC61YLR378C PRS2P38620 318 aaKnown RBP7.89□□□□□ -1.15
SEC61YLR378C GEP4P38812 185 aa7.89□□□□□ -1.15
SEC61YLR378C SEN34P39707 275 aa7.89□□□□□ -1.15
SEC61YLR378C CCS1P40202 249 aaKnown RBP7.89□□□□□ -1.15
SEC61YLR378C BMT5P40493 336 aa7.89□□□□□ -1.15
SEC61YLR378C OST1P41543 476 aaKnown RBP7.89□□□□□ -1.15
SEC61YLR378C UBP8P50102 471 aa7.89□□□□□ -1.15
SEC61YLR378C YIP5P53108 310 aa7.89□□□□□ -1.15
SEC61YLR378C YDC1Q02896 317 aa7.89□□□□□ -1.15
SEC61YLR378C YMR254CQ04838 102 aa7.89□□□□□ -1.15
SEC61YLR378C CRR1Q05790 422 aa7.89□□□□□ -1.15
SEC61YLR378C RRP15Q06511 250 aaPredicted RBP7.89□□□□□ -1.15
SEC61YLR378C YLL053CP0CD98 152 aa7.88□□□□□ -1.15
SEC61YLR378C MIR1P23641 311 aaKnown RBP7.88□□□□□ -1.15
SEC61YLR378C MRP20P32387 263 aa7.88□□□□□ -1.15
SEC61YLR378C GLC7P32598 312 aaKnown RBP7.88□□□□□ -1.15
SEC61YLR378C AGA2P32781 87 aa7.88□□□□□ -1.15
SEC61YLR378C FAT1P38225 669 aa7.88□□□□□ -1.15
SEC61YLR378C MRX5P47007 382 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 79.8 ms