RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W YLR126CQ12288 251 aa1.84□□□□□ -2.11
SMD2YLR275W IPP1P00817 287 aaKnown RBP1.83□□□□□ -2.12
SMD2YLR275W ERG24P32462 438 aaKnown RBP1.83□□□□□ -2.12
SMD2YLR275W YKL075CP36083 450 aa1.83□□□□□ -2.12
SMD2YLR275W YMR144WP40214 342 aaKnown RBP1.83□□□□□ -2.12
SMD2YLR275W ARC15P40518 154 aaRIP-Chip data1.83□□□□□ -2.12not detected
SMD2YLR275W YGL159WP53110 370 aa1.83□□□□□ -2.12
SMD2YLR275W YNL046WP53956 172 aa1.83□□□□□ -2.12
SMD2YLR275W FAR8Q05040 523 aa1.83□□□□□ -2.12
SMD2YLR275W YLR283WQ05867 314 aa1.83□□□□□ -2.12
SMD2YLR275W MATALPHA1P0CY06 175 aa1.82□□□□□ -2.12
SMD2YLR275W HMLALPHA1P0CY07 175 aa1.82□□□□□ -2.12
SMD2YLR275W CCA1P21269 546 aa1.82□□□□□ -2.12
SMD2YLR275W CUE1P38428 203 aa1.82□□□□□ -2.12
SMD2YLR275W INM2Q05533 292 aa1.82□□□□□ -2.12
SMD2YLR275W YLR030WQ07967 263 aa1.82□□□□□ -2.12
SMD2YLR275W YPL257WQ08974 193 aa1.82□□□□□ -2.12
SMD2YLR275W Q0255P03881 472 aa1.81□□□□□ -2.12
SMD2YLR275W YHR032W-AP0C5N6 59 aa1.81□□□□□ -2.12
SMD2YLR275W DOA4P32571 926 aa1.81□□□□□ -2.12
SMD2YLR275W YHR125WP38831 101 aa1.81□□□□□ -2.12
SMD2YLR275W SNX4P47057 423 aa1.81□□□□□ -2.12
SMD2YLR275W RMR1P53060 241 aa1.81□□□□□ -2.12
SMD2YLR275W YPR172WQ06608 200 aa1.81□□□□□ -2.12
SMD2YLR275W MHT1Q12525 324 aa1.81□□□□□ -2.12
SMD2YLR275W PUT1P09368 476 aa1.8□□□□□ -2.12
SMD2YLR275W ERD2P18414 219 aa1.8□□□□□ -2.12
SMD2YLR275W RPO26P20435 155 aa1.8□□□□□ -2.12
SMD2YLR275W YER085CP40058 173 aa1.8□□□□□ -2.12
SMD2YLR275W FIS1P40515 155 aa1.8□□□□□ -2.12
SMD2YLR275W ILM1P47155 203 aa1.8□□□□□ -2.12
SMD2YLR275W YGR026WP53217 278 aa1.8□□□□□ -2.12
SMD2YLR275W GTR2P53290 341 aa1.8□□□□□ -2.12
SMD2YLR275W YMR279CQ03263 540 aa1.8□□□□□ -2.12
SMD2YLR275W HTL1Q9URQ5 78 aa1.8□□□□□ -2.12
SMD2YLR275W DSF1P0CX08 502 aa1.79□□□□□ -2.12
SMD2YLR275W YNR073CP0CX09 502 aa1.79□□□□□ -2.12
SMD2YLR275W RPS5P26783 225 aaKnown RBP1.79□□□□□ -2.12
SMD2YLR275W VPS21P36017 210 aaKnown RBP1.79□□□□□ -2.12
SMD2YLR275W LSM4P40070 187 aaKnown RBP1.79□□□□□ -2.12
SMD2YLR275W NOP13P53883 403 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
SMD2YLR275W MSA1Q08471 629 aa1.79□□□□□ -2.12
SMD2YLR275W BOL1Q3E793 110 aa1.79□□□□□ -2.12
SMD2YLR275W SNA3P14359 133 aa1.78□□□□□ -2.12
SMD2YLR275W CDC10P25342 322 aaKnown RBP1.78□□□□□ -2.12
SMD2YLR275W VMA11P32842 164 aa1.78□□□□□ -2.12
SMD2YLR275W BMH2P34730 273 aaKnown RBP1.78□□□□□ -2.12
SMD2YLR275W YPT52P36018 234 aaKnown RBP1.78□□□□□ -2.12
SMD2YLR275W CAT5P41735 233 aa1.78□□□□□ -2.12
SMD2YLR275W SMD3P43321 101 aaKnown RBP1.78□□□□□ -2.12
SMD2YLR275W RPC17P47076 161 aa1.78□□□□□ -2.12
SMD2YLR275W HAM1P47119 197 aaKnown RBP1.78□□□□□ -2.12
SMD2YLR275W TRM9P49957 279 aa1.78□□□□□ -2.12
SMD2YLR275W NSA1P53136 463 aaPredicted RBP1.78□□□□□ -2.12
SMD2YLR275W AKR2Q12013 749 aa1.78□□□□□ -2.12
SMD2YLR275W COX5AP00424 153 aa1.77□□□□□ -2.13
SMD2YLR275W RHO1P06780 209 aaKnown RBP1.77□□□□□ -2.13
SMD2YLR275W RPL24BP24000 155 aaKnown RBP1.77□□□□□ -2.13
SMD2YLR275W RIB1P38066 345 aa1.77□□□□□ -2.13
SMD2YLR275W YAR068WP39564 161 aa1.77□□□□□ -2.13
SMD2YLR275W COX15P40086 486 aa1.77□□□□□ -2.13
SMD2YLR275W MCM22P47167 239 aa1.77□□□□□ -2.13
SMD2YLR275W PRM15Q03262 622 aa1.77□□□□□ -2.13
SMD2YLR275W ATG39Q06159 398 aa1.77□□□□□ -2.13
SMD2YLR275W NIP7Q08962 181 aaKnown RBP1.77□□□□□ -2.13
SMD2YLR275W YOR020W-AQ3E824 90 aa1.77□□□□□ -2.13
SMD2YLR275W YPL229WQ99395 206 aa1.77□□□□□ -2.13
SMD2YLR275W FKS1P38631 1876 aaKnown RBP1.77□□□□□ -2.13
SMD2YLR275W BCY1P07278 416 aaKnown RBP1.76□□□□□ -2.13
SMD2YLR275W PPA2P28239 310 aa1.76□□□□□ -2.13
SMD2YLR275W VMA6P32366 345 aaKnown RBP1.76□□□□□ -2.13
SMD2YLR275W NTF2P33331 125 aaKnown RBP1.76□□□□□ -2.13
SMD2YLR275W TCD1P38756 429 aa1.76□□□□□ -2.13
SMD2YLR275W RPF1P38805 295 aaKnown RBP1.76□□□□□ -2.13
SMD2YLR275W RTR1P40084 226 aaPredicted RBP1.76□□□□□ -2.13
SMD2YLR275W PRE6P40303 254 aaKnown RBP1.76□□□□□ -2.13
SMD2YLR275W AYR1P40471 297 aa1.76□□□□□ -2.13
SMD2YLR275W YJR149WP47177 404 aa1.76□□□□□ -2.13
SMD2YLR275W DAD3P69850 94 aa1.76□□□□□ -2.13
SMD2YLR275W YML096WQ04489 525 aa1.76□□□□□ -2.13
SMD2YLR275W SSQ1Q05931 657 aaPredicted RBP1.76□□□□□ -2.13
SMD2YLR275W SIR4P11978 1358 aa1.75□□□□□ -2.13
SMD2YLR275W THP2O13539 261 aaKnown RBP1.75□□□□□ -2.13
SMD2YLR275W RPL9AP05738 191 aaKnown RBP1.75□□□□□ -2.13
SMD2YLR275W FCY2P17064 533 aa1.75□□□□□ -2.13
SMD2YLR275W SSO1P32867 290 aa1.75□□□□□ -2.13
SMD2YLR275W MIC12P38341 106 aa1.75□□□□□ -2.13
SMD2YLR275W CTR2P38865 189 aa1.75□□□□□ -2.13
SMD2YLR275W RPA43P46669 326 aa1.75□□□□□ -2.13
SMD2YLR275W YJR056CP47115 236 aa1.75□□□□□ -2.13
SMD2YLR275W RPL9BP51401 191 aaKnown RBP1.75□□□□□ -2.13
SMD2YLR275W RUD3Q12234 484 aaKnown RBP1.75□□□□□ -2.13
SMD2YLR275W SPT3P06844 337 aa1.74□□□□□ -2.13
SMD2YLR275W YMR31P19955 123 aa1.74□□□□□ -2.13
SMD2YLR275W YBR063CP38083 404 aa1.74□□□□□ -2.13
SMD2YLR275W PEX17P40155 199 aa1.74□□□□□ -2.13
SMD2YLR275W OTU1P43558 301 aa1.74□□□□□ -2.13
SMD2YLR275W TOS8P53147 276 aa1.74□□□□□ -2.13
SMD2YLR275W ERV29P53337 310 aa1.74□□□□□ -2.13
SMD2YLR275W ABF2Q02486 183 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms