RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W YMD8Q03697 442 aa3.14□□□□□ -1.91
LCB5YLR260W SFH1Q06168 426 aa3.14□□□□□ -1.91
LCB5YLR260W MCH4Q08268 501 aa3.14□□□□□ -1.91
LCB5YLR260W YNG1Q08465 219 aa3.14□□□□□ -1.91
LCB5YLR260W DET1Q99288 334 aaKnown RBP3.14□□□□□ -1.91
LCB5YLR260W YER145C-AA0A023PYF4 145 aa3.13□□□□□ -1.91
LCB5YLR260W COS2P0CX12 379 aa3.13□□□□□ -1.91
LCB5YLR260W COS3P0CX13 379 aa3.13□□□□□ -1.91
LCB5YLR260W MRP2P10663 115 aaPredicted RBP3.13□□□□□ -1.91
LCB5YLR260W NUP1P20676 1076 aa3.13□□□□□ -1.91
LCB5YLR260W CLB2P24869 491 aa3.13□□□□□ -1.91
LCB5YLR260W YCR090CP25654 182 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W COX13P32799 129 aa3.13□□□□□ -1.91
LCB5YLR260W NTF2P33331 125 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W RPS27AP35997 82 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W RIM2P38127 377 aa3.13□□□□□ -1.91
LCB5YLR260W ROT2P38138 954 aa3.13□□□□□ -1.91
LCB5YLR260W RPS27BP38711 82 aa3.13□□□□□ -1.91
LCB5YLR260W GRE3P38715 327 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
LCB5YLR260W FAU1P40099 211 aa3.13□□□□□ -1.91
LCB5YLR260W MRPL49P40858 161 aaPredicted RBP3.13□□□□□ -1.91
LCB5YLR260W HMS2P47175 358 aa3.13□□□□□ -1.91
LCB5YLR260W MMS2P53152 137 aa3.13□□□□□ -1.91
LCB5YLR260W PCP1P53259 346 aa3.13□□□□□ -1.91
LCB5YLR260W MSO1P53604 210 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W CAF40P53829 373 aa3.13□□□□□ -1.91
LCB5YLR260W NRK1P53915 240 aa3.13□□□□□ -1.91
LCB5YLR260W NUP49Q02199 472 aa3.13□□□□□ -1.91
LCB5YLR260W RUB1Q03919 77 aa3.13□□□□□ -1.91
LCB5YLR260W HPT1Q04178 221 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W RRP40Q08285 240 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W SKI7Q08491 747 aaPredicted RBP3.13□□□□□ -1.91
LCB5YLR260W HNT3Q08702 217 aa3.13□□□□□ -1.91
LCB5YLR260W ATP16Q12165 160 aa3.13□□□□□ -1.91
LCB5YLR260W RTR2Q12378 196 aa3.13□□□□□ -1.91
LCB5YLR260W YCL001W-BQ96VH2 84 aa3.13□□□□□ -1.91
LCB5YLR260W KIN28P06242 306 aa3.13□□□□□ -1.91
LCB5YLR260W RPL20AP0CX23 172 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W RPL20BP0CX24 172 aaPredicted RBP3.13□□□□□ -1.91
LCB5YLR260W CUP2P15315 225 aa3.13□□□□□ -1.91
LCB5YLR260W CAM1P29547 415 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W HOM6P31116 359 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W QRI5P32344 111 aa3.13□□□□□ -1.91
LCB5YLR260W HIS7P33734 552 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W YBR032WP38223 100 aa3.13□□□□□ -1.91
LCB5YLR260W RBG1P39729 369 aa3.13□□□□□ -1.91
LCB5YLR260W PRE6P40303 254 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W APQ12P40532 138 aa3.13□□□□□ -1.91
LCB5YLR260W CWC25P53854 179 aaKnown RBP3.13□□□□□ -1.91
LCB5YLR260W TMA20P89886 181 aaPredicted RBP3.13□□□□□ -1.91
LCB5YLR260W NHP10Q03435 203 aa3.13□□□□□ -1.91
LCB5YLR260W YMR010WQ03687 405 aa3.13□□□□□ -1.91
LCB5YLR260W GLO2Q05584 274 aa3.13□□□□□ -1.91
LCB5YLR260W CTR3Q06686 241 aa3.13□□□□□ -1.91
LCB5YLR260W FCY22Q12119 530 aa3.13□□□□□ -1.91
LCB5YLR260W YCT1Q12235 531 aa3.13□□□□□ -1.91
LCB5YLR260W ILV6P25605 309 aaKnown RBP3.12□□□□□ -1.91
LCB5YLR260W PMT2P31382 759 aa3.12□□□□□ -1.91
LCB5YLR260W SUI1P32911 108 aaKnown RBP3.12□□□□□ -1.91
LCB5YLR260W YCR087C-AP37263 153 aa3.12□□□□□ -1.91
LCB5YLR260W YHR035WP38769 630 aa3.12□□□□□ -1.91
LCB5YLR260W PAC2P39937 518 aa3.12□□□□□ -1.91
LCB5YLR260W YJR012CP47087 207 aa3.12□□□□□ -1.91
LCB5YLR260W MOG1P47123 218 aa3.12□□□□□ -1.91
LCB5YLR260W NUP57P48837 541 aa3.12□□□□□ -1.91
LCB5YLR260W USE1P53146 245 aa3.12□□□□□ -1.91
LCB5YLR260W MST27P53176 234 aa3.12□□□□□ -1.91
LCB5YLR260W JAC1P53193 184 aa3.12□□□□□ -1.91
LCB5YLR260W CDH1P53197 566 aa3.12□□□□□ -1.91
LCB5YLR260W YPR127WQ06494 345 aa3.12□□□□□ -1.91
LCB5YLR260W NOC4Q06512 552 aaPredicted RBP3.12□□□□□ -1.91
LCB5YLR260W MHR1Q06630 226 aa3.12□□□□□ -1.91
LCB5YLR260W SGT1Q08446 395 aa3.12□□□□□ -1.91
LCB5YLR260W YLR049CQ12110 428 aa3.12□□□□□ -1.91
LCB5YLR260W AHA1Q12449 350 aaKnown RBP3.12□□□□□ -1.91
LCB5YLR260W WIP1Q2V2P8 89 aa3.12□□□□□ -1.91
LCB5YLR260W Q0144Q9ZZW2 109 aa3.12□□□□□ -1.91
LCB5YLR260W AIM17P23180 465 aaKnown RBP3.12□□□□□ -1.91
LCB5YLR260W STP22P25604 385 aa3.12□□□□□ -1.91
LCB5YLR260W TAH1P25638 111 aaPredicted RBP3.12□□□□□ -1.91
LCB5YLR260W SPS18P32572 300 aa3.12□□□□□ -1.91
LCB5YLR260W YIL060WP40519 144 aa3.12□□□□□ -1.91
LCB5YLR260W GDS1P41913 522 aa3.12□□□□□ -1.91
LCB5YLR260W YGR201CP42936 225 aa3.12□□□□□ -1.91
LCB5YLR260W TDA10P42938 290 aa3.12□□□□□ -1.91
LCB5YLR260W KEG1P43614 200 aa3.12□□□□□ -1.91
LCB5YLR260W YJL016WP47072 561 aa3.12□□□□□ -1.91
LCB5YLR260W GPI1P53306 609 aa3.12□□□□□ -1.91
LCB5YLR260W CPR8P53728 308 aa3.12□□□□□ -1.91
LCB5YLR260W ABF2Q02486 183 aa3.12□□□□□ -1.91
LCB5YLR260W HEM25Q07534 307 aa3.12□□□□□ -1.91
LCB5YLR260W MFG1Q07684 458 aa3.12□□□□□ -1.91
LCB5YLR260W YLR036CQ07986 203 aa3.12□□□□□ -1.91
LCB5YLR260W USB1Q12208 290 aaKnown RBP3.12□□□□□ -1.91
LCB5YLR260W ORT1Q12375 292 aa3.12□□□□□ -1.91
LCB5YLR260W YOP1Q12402 180 aa3.12□□□□□ -1.91
LCB5YLR260W CPR3P25719 182 aa3.11□□□□□ -1.91
LCB5YLR260W YMC1P32331 307 aa3.11□□□□□ -1.91
LCB5YLR260W GSP1P32835 219 aaKnown RBP3.11□□□□□ -1.91
LCB5YLR260W GSP2P32836 220 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms