RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W MPD1Q12404 318 aaKnown RBP8.56□□□□□ -1.04
SHH4YLR164W RDI1Q12434 202 aa8.56□□□□□ -1.04
SHH4YLR164W SSA3P09435 649 aaKnown RBP8.55□□□□□ -1.04
SHH4YLR164W SPS100P13130 326 aa8.55□□□□□ -1.04
SHH4YLR164W MSS1P32559 526 aaPredicted RBP8.55□□□□□ -1.04
SHH4YLR164W SSN8P47821 323 aa8.55□□□□□ -1.04
SHH4YLR164W UBC13P52490 153 aa8.55□□□□□ -1.04
SHH4YLR164W RSM27P53305 110 aa8.55□□□□□ -1.04
SHH4YLR164W ACS1Q01574 713 aa8.55□□□□□ -1.04
SHH4YLR164W RPS31P05759 152 aaKnown RBP8.54□□□□□ -1.04
SHH4YLR164W SAR1P20606 190 aaKnown RBP8.54□□□□□ -1.04
SHH4YLR164W PEX4P29340 183 aa8.54□□□□□ -1.04
SHH4YLR164W UTP30P36144 274 aaKnown RBP8.54□□□□□ -1.04
SHH4YLR164W YBR220CP38318 560 aa8.54□□□□□ -1.04
SHH4YLR164W YGP1P38616 354 aaKnown RBP8.54□□□□□ -1.04
SHH4YLR164W YNL092WP53934 400 aa8.54□□□□□ -1.04
SHH4YLR164W SYM1Q06563 197 aa8.54□□□□□ -1.04
SHH4YLR164W YLR125WQ12138 136 aa8.54□□□□□ -1.04
SHH4YLR164W MEC1P38111 2368 aa8.53□□□□□ -1.04
SHH4YLR164W MET3P08536 511 aa8.53□□□□□ -1.04
SHH4YLR164W GCD1P09032 578 aaPredicted RBP8.53□□□□□ -1.04
SHH4YLR164W FLO10P36170 1169 aa8.53□□□□□ -1.04
SHH4YLR164W ARO9P38840 513 aaPredicted RBP8.53□□□□□ -1.04
SHH4YLR164W SKO1Q02100 647 aa8.53□□□□□ -1.04
SHH4YLR164W YMR279CQ03263 540 aa8.53□□□□□ -1.04
SHH4YLR164W YDR114CQ04597 100 aa8.53□□□□□ -1.04
SHH4YLR164W YPR098CQ06089 161 aa8.53□□□□□ -1.04
SHH4YLR164W YOR186WQ08560 144 aa8.53□□□□□ -1.04
SHH4YLR164W EAF3Q12432 401 aa8.53□□□□□ -1.04
SHH4YLR164W FSH3Q99369 266 aa8.53□□□□□ -1.04
SHH4YLR164W EDS1P38073 919 aa8.52□□□□□ -1.05
SHH4YLR164W EGT2P42835 1041 aa8.52□□□□□ -1.05
SHH4YLR164W GPG1P53130 126 aa8.52□□□□□ -1.05
SHH4YLR164W CRZ1P53968 678 aa8.52□□□□□ -1.05
SHH4YLR164W YML018CQ03730 393 aa8.52□□□□□ -1.05
SHH4YLR164W PET20Q99373 253 aa8.52□□□□□ -1.05
SHH4YLR164W RFA3P26755 122 aaKnown RBP8.51□□□□□ -1.05
SHH4YLR164W MTR2P34232 184 aaKnown RBP8.51□□□□□ -1.05
SHH4YLR164W PAN3P36102 679 aaPredicted RBP8.51□□□□□ -1.05
SHH4YLR164W SKP1P52286 194 aa8.51□□□□□ -1.05
SHH4YLR164W SED1Q01589 338 aa8.51□□□□□ -1.05
SHH4YLR164W YDC1Q02896 317 aa8.51□□□□□ -1.05
SHH4YLR164W FEX2Q08991 375 aa8.51□□□□□ -1.05
SHH4YLR164W WTM2Q12206 467 aa8.51□□□□□ -1.05
SHH4YLR164W RPL25P04456 142 aaKnown RBP8.5□□□□□ -1.05
SHH4YLR164W SEN2P16658 377 aa8.5□□□□□ -1.05
SHH4YLR164W DIT1P21623 536 aa8.5□□□□□ -1.05
SHH4YLR164W IFM1P25038 676 aa8.5□□□□□ -1.05
SHH4YLR164W CPR4P25334 318 aa8.5□□□□□ -1.05
SHH4YLR164W IMP1P28627 190 aa8.5□□□□□ -1.05
SHH4YLR164W OCH1P31755 480 aa8.5□□□□□ -1.05
SHH4YLR164W GLY1P37303 387 aaKnown RBP8.5□□□□□ -1.05
SHH4YLR164W FAT1P38225 669 aa8.5□□□□□ -1.05
SHH4YLR164W GNA1P43577 159 aaPredicted RBP8.5□□□□□ -1.05
SHH4YLR164W GTF1P53260 183 aaPredicted RBP8.5□□□□□ -1.05
SHH4YLR164W PIN3Q06449 215 aa8.5□□□□□ -1.05
SHH4YLR164W YLR108CQ12259 485 aa8.5□□□□□ -1.05
SHH4YLR164W YOR192C-CQ3E736 78 aa8.5□□□□□ -1.05
SHH4YLR164W URA3P03962 267 aa8.49□□□□□ -1.05
SHH4YLR164W RPL43AP0CX25 92 aaKnown RBP8.49□□□□□ -1.05
SHH4YLR164W RPL43BP0CX26 92 aa8.49□□□□□ -1.05
SHH4YLR164W PET122P10355 254 aa8.49□□□□□ -1.05
SHH4YLR164W YCR016WP25617 290 aaKnown RBP8.49□□□□□ -1.05
SHH4YLR164W ERG3P32353 365 aa8.49□□□□□ -1.05
SHH4YLR164W YOX1P34161 385 aa8.49□□□□□ -1.05
SHH4YLR164W SWD3P38123 315 aa8.49□□□□□ -1.05
SHH4YLR164W POP8P38208 133 aa8.49□□□□□ -1.05
SHH4YLR164W LAP3Q01532 483 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
SHH4YLR164W YDR248CQ03786 193 aa8.49□□□□□ -1.05
SHH4YLR164W YOL118CQ08259 102 aa8.49□□□□□ -1.05
SHH4YLR164W ARG80P07249 177 aa8.48□□□□□ -1.05
SHH4YLR164W PUT1P09368 476 aa8.48□□□□□ -1.05
SHH4YLR164W CDC34P14682 295 aa8.48□□□□□ -1.05
SHH4YLR164W CKS1P20486 150 aaKnown RBP8.48□□□□□ -1.05
SHH4YLR164W DAL80P26343 269 aa8.48□□□□□ -1.05
SHH4YLR164W YBR197CP38306 217 aa8.48□□□□□ -1.05
SHH4YLR164W VMA22P38784 181 aa8.48□□□□□ -1.05
SHH4YLR164W YMR144WP40214 342 aaKnown RBP8.48□□□□□ -1.05
SHH4YLR164W YJR011CP47086 261 aaPredicted RBP8.48□□□□□ -1.05
SHH4YLR164W UBP8P50102 471 aa8.48□□□□□ -1.05
SHH4YLR164W TAF4P50105 388 aa8.48□□□□□ -1.05
SHH4YLR164W ALG9P53868 555 aaKnown RBP8.48□□□□□ -1.05
SHH4YLR164W FEX1Q08913 375 aa8.48□□□□□ -1.05
SHH4YLR164W FRE8Q12209 686 aa8.48□□□□□ -1.05
SHH4YLR164W RPL39P04650 51 aa8.47□□□□□ -1.05
SHH4YLR164W RPL6BP05739 176 aaKnown RBP8.47□□□□□ -1.05
SHH4YLR164W STF2P16965 84 aa8.47□□□□□ -1.05
SHH4YLR164W MRP17P28778 131 aa8.47□□□□□ -1.05
SHH4YLR164W YKL187CP34231 750 aa8.47□□□□□ -1.05
SHH4YLR164W SHM2P37291 469 aaKnown RBP8.47□□□□□ -1.05
SHH4YLR164W RRF1P38771 230 aa8.47□□□□□ -1.05
SHH4YLR164W RMD6P39975 231 aa8.47□□□□□ -1.05
SHH4YLR164W YER137CP40083 148 aaKnown RBP8.47□□□□□ -1.05
SHH4YLR164W GON7P46984 123 aa8.47□□□□□ -1.05
SHH4YLR164W TRM13Q12383 476 aa8.47□□□□□ -1.05
SHH4YLR164W RPS23AP0CX29 145 aaKnown RBP8.46□□□□□ -1.06
SHH4YLR164W RPS23BP0CX30 145 aa8.46□□□□□ -1.06
SHH4YLR164W MIR1P23641 311 aaKnown RBP8.46□□□□□ -1.06
SHH4YLR164W RPB7P34087 171 aa8.46□□□□□ -1.06
SHH4YLR164W SWD2P36104 329 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms