RNA–Protein interactions for RNA: YKR002W

PAP1, Transcript of Poly(A) polymerase, yeast

Gene PAP1, Length 1,707 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAP1	YKR002W	URA10	P30402	227 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	GOS1	P38736	223 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	IKI1	P38874	309 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	SMX2	P40204	77 aa	Known RBP	4.89	□□□□□ -1.63
PAP1	YKR002W	ADO1	P47143	340 aa	Known RBP	4.89	□□□□□ -1.63
PAP1	YKR002W	TFC7	Q12415	435 aa		4.89	□□□□□ -1.63
PAP1	YKR002W	RSF2	P46974	1380 aa		4.88	□□□□□ -1.63
PAP1	YKR002W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
PAP1	YKR002W	YPT52	P36018	234 aa	Known RBP	4.88	□□□□□ -1.63
PAP1	YKR002W	GET1	P53192	235 aa		4.88	□□□□□ -1.63
PAP1	YKR002W	ADD37	Q03233	198 aa		4.88	□□□□□ -1.63
PAP1	YKR002W	YOR292C	Q08743	309 aa		4.88	□□□□□ -1.63
PAP1	YKR002W	ERV2	Q12284	196 aa		4.88	□□□□□ -1.63
PAP1	YKR002W	NAG1	Q8TGN9	163 aa		4.88	□□□□□ -1.63
PAP1	YKR002W	ALK2	P32789	676 aa	Predicted RBP	4.87	□□□□□ -1.63
PAP1	YKR002W	RFT1	P38206	574 aa	Predicted RBP	4.87	□□□□□ -1.63
PAP1	YKR002W	VMA7	P39111	118 aa		4.87	□□□□□ -1.63
PAP1	YKR002W	IMP4	P53941	290 aa	Known RBP	4.87	□□□□□ -1.63
PAP1	YKR002W	SDC1	Q03323	175 aa		4.87	□□□□□ -1.63
PAP1	YKR002W	SPC2	Q04969	178 aa		4.87	□□□□□ -1.63
PAP1	YKR002W	YPD1	Q07688	167 aa		4.87	□□□□□ -1.63
PAP1	YKR002W	FDH1	Q08911	376 aa		4.87	□□□□□ -1.63
PAP1	YKR002W	DCN1	Q12395	269 aa		4.87	□□□□□ -1.63
PAP1	YKR002W	NUP192	P47054	1683 aa		4.87	□□□□□ -1.63
PAP1	YKR002W	CBP6	P07253	162 aa	Predicted RBP	4.86	□□□□□ -1.63
PAP1	YKR002W	IFM1	P25038	676 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	LDS1	P31379	325 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	POP7	P38291	140 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	CUE1	P38428	203 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	YAP3	P38749	330 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	YNL208W	P40159	199 aa	Known RBP	4.86	□□□□□ -1.63
PAP1	YKR002W	PAN6	P40459	309 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	YFR057W	P43625	151 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	LSM1	P47017	172 aa	Known RBP	4.86	□□□□□ -1.63
PAP1	YKR002W	LSM8	P47093	109 aa	Known RBP	4.86	□□□□□ -1.63
PAP1	YKR002W	SDS23	P53172	527 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	YGR015C	P53208	328 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	UTP15	Q04305	513 aa	Known RBP	4.86	□□□□□ -1.63
PAP1	YKR002W	YPR098C	Q06089	161 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	IZH2	Q12442	317 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	SPO14	P36126	1683 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	FAS2	P19097	1887 aa	Known RBP	4.86	□□□□□ -1.63
PAP1	YKR002W	SDH3	P33421	198 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	UTP30	P36144	274 aa	Known RBP	4.86	□□□□□ -1.63
PAP1	YKR002W	TRM9	P49957	279 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	NRM1	P53718	249 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	MMT2	Q08970	484 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	YPL245W	Q12179	454 aa	Known RBP	4.86	□□□□□ -1.63
PAP1	YKR002W	HMS1	Q12398	434 aa		4.86	□□□□□ -1.63
PAP1	YKR002W	HHF1	P02309	103 aa	Known RBP	4.85	□□□□□ -1.63
PAP1	YKR002W	CDC50	P25656	391 aa		4.85	□□□□□ -1.63
PAP1	YKR002W	CDC13	P32797	924 aa	Known RBP	4.85	□□□□□ -1.63
PAP1	YKR002W	SHE1	P38200	338 aa		4.85	□□□□□ -1.63
PAP1	YKR002W	SEC72	P39742	193 aa	Known RBP	4.85	□□□□□ -1.63
PAP1	YKR002W	FMP32	P43557	207 aa		4.85	□□□□□ -1.63
PAP1	YKR002W	BIR1	P47134	954 aa		4.85	□□□□□ -1.63
PAP1	YKR002W	JLP1	Q12358	412 aa		4.85	□□□□□ -1.63
PAP1	YKR002W	YBR298C-A	Q8TGK4	73 aa		4.85	□□□□□ -1.63
PAP1	YKR002W	PHO80	P20052	293 aa		4.84	□□□□□ -1.63
PAP1	YKR002W	TFC1	P32367	649 aa		4.84	□□□□□ -1.63
PAP1	YKR002W	FRM2	P37261	193 aa		4.84	□□□□□ -1.63
PAP1	YKR002W	BAT1	P38891	393 aa	Known RBP	4.84	□□□□□ -1.63
PAP1	YKR002W	AIM2	P39721	246 aa		4.84	□□□□□ -1.63
PAP1	YKR002W	PRE6	P40303	254 aa	Known RBP	4.84	□□□□□ -1.63
PAP1	YKR002W	HPM1	P40481	377 aa		4.84	□□□□□ -1.63
PAP1	YKR002W	AVT7	P40501	490 aa		4.84	□□□□□ -1.63
PAP1	YKR002W	YJR149W	P47177	404 aa		4.84	□□□□□ -1.63
PAP1	YKR002W	RRS1	Q08746	203 aa	Known RBP	4.84	□□□□□ -1.63
PAP1	YKR002W	GPM2	Q12008	311 aa		4.84	□□□□□ -1.63
PAP1	YKR002W	RFM1	Q12192	310 aa		4.84	□□□□□ -1.63
PAP1	YKR002W	YLR126C	Q12288	251 aa		4.84	□□□□□ -1.63
PAP1	YKR002W	VMR1	P38735	1592 aa		4.83	□□□□□ -1.64
PAP1	YKR002W	RPS19A	P07280	144 aa	Known RBP	4.83	□□□□□ -1.64
PAP1	YKR002W	RPS19B	P07281	144 aa	Predicted RBP	4.83	□□□□□ -1.64
PAP1	YKR002W	YHL049C	P38722	271 aa		4.83	□□□□□ -1.64
PAP1	YKR002W	BMT5	P40493	336 aa		4.83	□□□□□ -1.64
PAP1	YKR002W	OSH6	Q02201	448 aa		4.83	□□□□□ -1.64
PAP1	YKR002W	ELP3	Q02908	557 aa	Known RBP	4.83	□□□□□ -1.64
PAP1	YKR002W	PBA1	Q05778	276 aa		4.83	□□□□□ -1.64
PAP1	YKR002W	YPL229W	Q99395	206 aa		4.83	□□□□□ -1.64
PAP1	YKR002W	RPL28	P02406	149 aa	Known RBP	4.83	□□□□□ -1.64
PAP1	YKR002W	BCY1	P07278	416 aa	Known RBP	4.83	□□□□□ -1.64
PAP1	YKR002W	RPL4A	P10664	362 aa	Known RBP	4.83	□□□□□ -1.64
PAP1	YKR002W	GDH2	P33327	1092 aa	Known RBP	4.83	□□□□□ -1.64
PAP1	YKR002W	ETR1	P38071	380 aa		4.83	□□□□□ -1.64
PAP1	YKR002W	RPL4B	P49626	362 aa	Known RBP	4.83	□□□□□ -1.64
PAP1	YKR002W	TOS8	P53147	276 aa		4.83	□□□□□ -1.64
PAP1	YKR002W	DID2	P69771	204 aa		4.83	□□□□□ -1.64
PAP1	YKR002W	JID1	Q12350	301 aa		4.83	□□□□□ -1.64
PAP1	YKR002W	ATG22	P25568	528 aa		4.82	□□□□□ -1.64
PAP1	YKR002W	MRP21	P38175	177 aa		4.82	□□□□□ -1.64
PAP1	YKR002W	SEN34	P39707	275 aa		4.82	□□□□□ -1.64
PAP1	YKR002W	CPR7	P47103	393 aa		4.82	□□□□□ -1.64
PAP1	YKR002W	NUP57	P48837	541 aa		4.82	□□□□□ -1.64
PAP1	YKR002W	DIE2	P50076	525 aa		4.82	□□□□□ -1.64
PAP1	YKR002W	FMP41	P53889	259 aa	Known RBP	4.82	□□□□□ -1.64
PAP1	YKR002W	YMR279C	Q03263	540 aa		4.82	□□□□□ -1.64
PAP1	YKR002W	GTT2	Q12390	233 aa		4.82	□□□□□ -1.64
PAP1	YKR002W	NUP188	P52593	1655 aa	Known RBP	4.82	□□□□□ -1.64
PAP1	YKR002W	SPT3	P06844	337 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 185 ms