RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C HAP3P13434 144 aa4.93□□□□□ -1.62
VPS1YKR001C DAL82P21705 255 aa4.93□□□□□ -1.62
VPS1YKR001C DCG1P32460 244 aa4.93□□□□□ -1.62
VPS1YKR001C REC104P33323 182 aa4.93□□□□□ -1.62
VPS1YKR001C ROT2P38138 954 aa4.93□□□□□ -1.62
VPS1YKR001C YBR032WP38223 100 aa4.93□□□□□ -1.62
VPS1YKR001C DOG1P38774 246 aa4.93□□□□□ -1.62
VPS1YKR001C YER188WP40103 239 aa4.93□□□□□ -1.62
VPS1YKR001C HST3P53687 447 aa4.93□□□□□ -1.62
VPS1YKR001C ASI3P53983 676 aa4.93□□□□□ -1.62
VPS1YKR001C TRM12Q04235 462 aa4.93□□□□□ -1.62
VPS1YKR001C YLR012CQ07927 99 aa4.93□□□□□ -1.62
VPS1YKR001C RAD28Q12021 506 aa4.93□□□□□ -1.62
VPS1YKR001C PST1Q12355 444 aa4.93□□□□□ -1.62
VPS1YKR001C YLR462WO13556 202 aa4.92□□□□□ -1.62
VPS1YKR001C ADK1P07170 222 aaKnown RBP4.92□□□□□ -1.62
VPS1YKR001C CAP2P13517 287 aa4.92□□□□□ -1.62
VPS1YKR001C SCO1P23833 295 aa4.92□□□□□ -1.62
VPS1YKR001C YKL151CP36059 337 aa4.92□□□□□ -1.62
VPS1YKR001C MTC4P38335 694 aaKnown RBP4.92□□□□□ -1.62
VPS1YKR001C SHU2P38957 223 aa4.92□□□□□ -1.62
VPS1YKR001C PHO90P39535 881 aa4.92□□□□□ -1.62
VPS1YKR001C TAX4P47030 604 aa4.92□□□□□ -1.62
VPS1YKR001C MPA43P53583 542 aaPredicted RBP4.92□□□□□ -1.62
VPS1YKR001C IZH1Q03419 316 aa4.92□□□□□ -1.62
VPS1YKR001C TSA2Q04120 196 aa4.92□□□□□ -1.62
VPS1YKR001C YDL199CQ12407 687 aa4.92□□□□□ -1.62
VPS1YKR001C SGA1P08019 549 aa4.91□□□□□ -1.62
VPS1YKR001C TIR1P10863 254 aa4.91□□□□□ -1.62
VPS1YKR001C EPT1P22140 391 aa4.91□□□□□ -1.62
VPS1YKR001C YIH1P25637 258 aa4.91□□□□□ -1.62
VPS1YKR001C EMP70P32802 667 aa4.91□□□□□ -1.62
VPS1YKR001C PRE6P40303 254 aaKnown RBP4.91□□□□□ -1.62
VPS1YKR001C YIL024CP40543 189 aa4.91□□□□□ -1.62
VPS1YKR001C YNL092WP53934 400 aa4.91□□□□□ -1.62
VPS1YKR001C YML018CQ03730 393 aa4.91□□□□□ -1.62
VPS1YKR001C ENT4Q07872 247 aa4.91□□□□□ -1.62
VPS1YKR001C GEP3Q08622 556 aa4.91□□□□□ -1.62
VPS1YKR001C YPL278CQ08990 100 aa4.91□□□□□ -1.62
VPS1YKR001C YCT1Q12235 531 aa4.91□□□□□ -1.62
VPS1YKR001C SPE4Q12455 300 aa4.91□□□□□ -1.62
VPS1YKR001C UBA3Q99344 299 aa4.91□□□□□ -1.62
VPS1YKR001C RPB10P22139 70 aa4.91□□□□□ -1.62
VPS1YKR001C PAD1P33751 242 aaKnown RBP RIP-Chip data4.91□□□□□ -1.62not detected
VPS1YKR001C KRE29P40026 464 aa4.91□□□□□ -1.62
VPS1YKR001C YER076CP40049 302 aa4.91□□□□□ -1.62
VPS1YKR001C AZF1P41696 914 aa4.91□□□□□ -1.62
VPS1YKR001C SSY5P47002 699 aa4.91□□□□□ -1.62
VPS1YKR001C YIP1P53039 248 aa4.91□□□□□ -1.62
VPS1YKR001C YIP4P53093 235 aa4.91□□□□□ -1.62
VPS1YKR001C FRE4P53746 719 aa4.91□□□□□ -1.62
VPS1YKR001C IBD2P53892 351 aa4.91□□□□□ -1.62
VPS1YKR001C CRZ1P53968 678 aa4.91□□□□□ -1.62
VPS1YKR001C TY1A-DR2Q03964 440 aaKnown RBP4.91□□□□□ -1.62
VPS1YKR001C AIM39Q08223 395 aa4.91□□□□□ -1.62
VPS1YKR001C AFT2Q08957 416 aa4.91□□□□□ -1.62
VPS1YKR001C YOR342CQ12182 319 aa4.91□□□□□ -1.62
VPS1YKR001C PRR2Q12310 699 aa4.91□□□□□ -1.62
VPS1YKR001C ATG5Q12380 294 aa4.91□□□□□ -1.62
VPS1YKR001C AHA1Q12449 350 aaKnown RBP4.91□□□□□ -1.62
VPS1YKR001C RPL13AQ12690 199 aaPredicted RBP4.91□□□□□ -1.62
VPS1YKR001C YER190C-BP0CX94 160 aa4.9□□□□□ -1.62
VPS1YKR001C YEL077W-AP0CX95 160 aa4.9□□□□□ -1.62
VPS1YKR001C YGR296C-BP0CX96 160 aa4.9□□□□□ -1.62
VPS1YKR001C YPL283W-BP0CX97 160 aa4.9□□□□□ -1.62
VPS1YKR001C YPR204C-AP0CX98 160 aa4.9□□□□□ -1.62
VPS1YKR001C LSB5P25369 354 aa4.9□□□□□ -1.62
VPS1YKR001C PUT3P25502 979 aaPredicted RBP4.9□□□□□ -1.62
VPS1YKR001C SNC1P31109 117 aa4.9□□□□□ -1.62
VPS1YKR001C PDC2P32896 925 aa4.9□□□□□ -1.62
VPS1YKR001C YET1P35723 206 aa4.9□□□□□ -1.62
VPS1YKR001C PAN3P36102 679 aaPredicted RBP4.9□□□□□ -1.62
VPS1YKR001C YBL029WP38201 376 aa4.9□□□□□ -1.62
VPS1YKR001C YHK8P38776 514 aa4.9□□□□□ -1.62
VPS1YKR001C YEL075CP39972 122 aa4.9□□□□□ -1.62
VPS1YKR001C MIT1P40002 666 aa4.9□□□□□ -1.62
VPS1YKR001C BUL1P48524 976 aa4.9□□□□□ -1.62
VPS1YKR001C SNO2P53823 222 aa4.9□□□□□ -1.62
VPS1YKR001C RHO4Q00246 291 aa4.9□□□□□ -1.62
VPS1YKR001C PIR1Q03178 341 aa4.9□□□□□ -1.62
VPS1YKR001C FMN1Q03778 218 aa4.9□□□□□ -1.62
VPS1YKR001C YLR224WQ05947 369 aa4.9□□□□□ -1.62
VPS1YKR001C LDS2Q08218 356 aa4.9□□□□□ -1.62
VPS1YKR001C GPB1Q08886 897 aa4.9□□□□□ -1.62
VPS1YKR001C Q0182Q9ZZW1 134 aa4.9□□□□□ -1.62
VPS1YKR001C UBR1P19812 1950 aa4.9□□□□□ -1.63
VPS1YKR001C ALG7P07286 448 aa4.9□□□□□ -1.63
VPS1YKR001C YER039C-AP0CD97 72 aa4.9□□□□□ -1.63
VPS1YKR001C RPB5P20434 215 aa4.9□□□□□ -1.63
VPS1YKR001C INO2P26798 304 aa4.9□□□□□ -1.63
VPS1YKR001C PPZ2P33329 710 aa4.9□□□□□ -1.63
VPS1YKR001C KTI12P34253 313 aaKnown RBP4.9□□□□□ -1.63
VPS1YKR001C YHR130CP38834 111 aa4.9□□□□□ -1.63
VPS1YKR001C ARO9P38840 513 aaPredicted RBP4.9□□□□□ -1.63
VPS1YKR001C CHS7P38843 316 aa4.9□□□□□ -1.63
VPS1YKR001C SKN7P38889 622 aa4.9□□□□□ -1.63
VPS1YKR001C HPA3P39979 161 aa4.9□□□□□ -1.63
VPS1YKR001C BMT5P40493 336 aa4.9□□□□□ -1.63
VPS1YKR001C HAC1P41546 238 aa4.9□□□□□ -1.63
VPS1YKR001C YJR124CP47159 448 aa4.9□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms