RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C YKL102CP34249 101 aa1.88□□□□□ -2.11
UFD4YKL010C NNK1P36003 928 aa1.88□□□□□ -2.11
UFD4YKL010C MRPS9P38120 278 aa1.88□□□□□ -2.11
UFD4YKL010C LSM12P38828 187 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C LYS1P38998 373 aaRIP-Chip data1.88□□□□□ -2.11not detected
UFD4YKL010C YEA4P40004 342 aa1.88□□□□□ -2.11
UFD4YKL010C SFH5P47008 294 aa1.88□□□□□ -2.11
UFD4YKL010C OCA1P50946 238 aaPredicted RBP1.88□□□□□ -2.11
UFD4YKL010C ERG25P53045 309 aa1.88□□□□□ -2.11
UFD4YKL010C RSM27P53305 110 aa1.88□□□□□ -2.11
UFD4YKL010C YMR082CQ04276 118 aa1.88□□□□□ -2.11
UFD4YKL010C HNT1Q04344 158 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C MDM30Q05930 598 aa1.88□□□□□ -2.11
UFD4YKL010C NMA1Q06178 401 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C YPL264CQ08980 353 aa1.88□□□□□ -2.11
UFD4YKL010C TY1A-GR1Q12085 440 aa1.88□□□□□ -2.11
UFD4YKL010C PRS5Q12265 496 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C YDL007C-AQ2V2Q0 85 aa1.88□□□□□ -2.11
UFD4YKL010C TY1A-PR3Q6Q5H1 440 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C TY1A-OLQ92392 440 aaKnown RBP1.88□□□□□ -2.11
UFD4YKL010C MXR2P25566 168 aa1.87□□□□□ -2.11
UFD4YKL010C YCR101CP25607 182 aa1.87□□□□□ -2.11
UFD4YKL010C DBF20P32328 564 aa1.87□□□□□ -2.11
UFD4YKL010C DCG1P32460 244 aa1.87□□□□□ -2.11
UFD4YKL010C SDH4P37298 181 aa1.87□□□□□ -2.11
UFD4YKL010C ICS2P38284 255 aa1.87□□□□□ -2.11
UFD4YKL010C FMO1P38866 432 aa1.87□□□□□ -2.11
UFD4YKL010C SDP1P40479 209 aa1.87□□□□□ -2.11
UFD4YKL010C RPA34P47006 233 aaPredicted RBP1.87□□□□□ -2.11
UFD4YKL010C YGR045CP53229 120 aa1.87□□□□□ -2.11
UFD4YKL010C YRA1Q12159 226 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C DGK1Q12382 290 aa1.87□□□□□ -2.11
UFD4YKL010C YOP1Q12402 180 aa1.87□□□□□ -2.11
UFD4YKL010C YGL194C-AQ2V2P6 80 aa1.87□□□□□ -2.11
UFD4YKL010C BOL1Q3E793 110 aa1.87□□□□□ -2.11
UFD4YKL010C YPR108W-AQ3E7B3 70 aa1.87□□□□□ -2.11
UFD4YKL010C ATG40Q99325 256 aa1.87□□□□□ -2.11
UFD4YKL010C UBI4P0CG63 381 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C RPL40AP0CH08 128 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C RPL40BP0CH09 128 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C YCR025CP25352 136 aa1.87□□□□□ -2.11
UFD4YKL010C CDC50P25656 391 aa1.87□□□□□ -2.11
UFD4YKL010C AFG1P32317 509 aa1.87□□□□□ -2.11
UFD4YKL010C FPR2P32472 135 aa1.87□□□□□ -2.11
UFD4YKL010C ARC19P33204 171 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C RRP3P38712 501 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C HSP10P38910 106 aa1.87□□□□□ -2.11
UFD4YKL010C SPG5P42933 373 aa1.87□□□□□ -2.11
UFD4YKL010C CTK2P46962 323 aa1.87□□□□□ -2.11
UFD4YKL010C DAN1P47178 298 aa1.87□□□□□ -2.11
UFD4YKL010C ASK10P48361 1146 aa1.87□□□□□ -2.11
UFD4YKL010C TIM11P81449 96 aaPredicted RBP1.87□□□□□ -2.11
UFD4YKL010C YDR286CQ05530 114 aa1.87□□□□□ -2.11
UFD4YKL010C BER1Q06688 274 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C IRC19Q07843 230 aa1.87□□□□□ -2.11
UFD4YKL010C VAM3Q12241 283 aa1.87□□□□□ -2.11
UFD4YKL010C YPS3Q12303 508 aa1.87□□□□□ -2.11
UFD4YKL010C PRM4Q12498 284 aa1.87□□□□□ -2.11
UFD4YKL010C YPR145C-AQ2V2P0 78 aa1.87□□□□□ -2.11
UFD4YKL010C ZRC1P20107 442 aa1.87□□□□□ -2.11
UFD4YKL010C AHT1P29589 182 aa1.87□□□□□ -2.11
UFD4YKL010C SDH8P38345 138 aa1.87□□□□□ -2.11
UFD4YKL010C HXT14P42833 540 aa1.87□□□□□ -2.11
UFD4YKL010C MOB2P43563 287 aa1.87□□□□□ -2.11
UFD4YKL010C IKS1P47042 667 aa1.87□□□□□ -2.11
UFD4YKL010C ALG9P53868 555 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C TRS23Q03784 219 aa1.87□□□□□ -2.11
UFD4YKL010C YDR387CQ04162 555 aa1.87□□□□□ -2.11
UFD4YKL010C DIC1Q06143 298 aa1.87□□□□□ -2.11
UFD4YKL010C NPC2Q12408 173 aa1.87□□□□□ -2.11
UFD4YKL010C TPI1P00942 248 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C ARO3P14843 370 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C PRE9P23638 258 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C VMA5P31412 392 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C COS9P36034 407 aa1.87□□□□□ -2.11
UFD4YKL010C FRM2P37261 193 aa1.87□□□□□ -2.11
UFD4YKL010C YMR262WP38430 313 aa1.87□□□□□ -2.11
UFD4YKL010C SEN34P39707 275 aa1.87□□□□□ -2.11
UFD4YKL010C SMD3P43321 101 aaKnown RBP1.87□□□□□ -2.11
UFD4YKL010C YIP5P53108 310 aa1.87□□□□□ -2.11
UFD4YKL010C GPI15P53961 229 aa1.87□□□□□ -2.11
UFD4YKL010C EKI1Q03764 534 aa1.87□□□□□ -2.11
UFD4YKL010C GIS1Q03833 894 aa1.87□□□□□ -2.11
UFD4YKL010C VPS13Q07878 3144 aa1.87□□□□□ -2.11
UFD4YKL010C NAM2P11325 894 aa1.86□□□□□ -2.11
UFD4YKL010C SEC59P20048 519 aa1.86□□□□□ -2.11
UFD4YKL010C POF1P25576 258 aa1.86□□□□□ -2.11
UFD4YKL010C PAN3P36102 679 aaPredicted RBP1.86□□□□□ -2.11
UFD4YKL010C SHB17P36136 271 aaKnown RBP1.86□□□□□ -2.11
UFD4YKL010C TRS20P38334 175 aa1.86□□□□□ -2.11
UFD4YKL010C YNL208WP40159 199 aaKnown RBP1.86□□□□□ -2.11
UFD4YKL010C QRI1P43123 477 aaKnown RBP1.86□□□□□ -2.11
UFD4YKL010C CIN2P46670 268 aa1.86□□□□□ -2.11
UFD4YKL010C BXI1P48558 297 aa1.86□□□□□ -2.11
UFD4YKL010C CWC25P53854 179 aaKnown RBP1.86□□□□□ -2.11
UFD4YKL010C OCA2P53949 197 aa1.86□□□□□ -2.11
UFD4YKL010C FIT1Q04433 528 aa1.86□□□□□ -2.11
UFD4YKL010C ERP1Q05359 219 aaKnown RBP1.86□□□□□ -2.11
UFD4YKL010C RTT103Q05543 409 aa1.86□□□□□ -2.11
UFD4YKL010C SEI1Q06058 285 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 6.6 ms