RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W AEP3Q12089 606 aa13.17□□□□□ -0.3
RTC3YHR087W TFB5Q3E7C1 72 aaPredicted RBP13.17□□□□□ -0.3
RTC3YHR087W CDC28P00546 298 aaKnown RBP13.16□□□□□ -0.3
RTC3YHR087W ERG3P32353 365 aa13.16□□□□□ -0.3
RTC3YHR087W YBL010CP32788 280 aa13.16□□□□□ -0.3
RTC3YHR087W JAC1P53193 184 aa13.16□□□□□ -0.3
RTC3YHR087W DID2P69771 204 aa13.16□□□□□ -0.3
RTC3YHR087W THI72Q08579 599 aa13.16□□□□□ -0.3
RTC3YHR087W SCP1Q08873 200 aa13.16□□□□□ -0.3
RTC3YHR087W ERP4Q12450 207 aa13.16□□□□□ -0.3
RTC3YHR087W KAE1P36132 386 aa13.15□□□□□ -0.3
RTC3YHR087W UBC12P52491 188 aa13.15□□□□□ -0.3
RTC3YHR087W MRP51Q02950 344 aa13.15□□□□□ -0.3
RTC3YHR087W YDR248CQ03786 193 aa13.15□□□□□ -0.3
RTC3YHR087W YAP6Q03935 383 aa13.15□□□□□ -0.3
RTC3YHR087W NAT2P37293 288 aa13.14□□□□□ -0.31
RTC3YHR087W POP8P38208 133 aa13.14□□□□□ -0.31
RTC3YHR087W BMT5P40493 336 aa13.14□□□□□ -0.31
RTC3YHR087W SRP1Q02821 542 aaKnown RBP13.14□□□□□ -0.31
RTC3YHR087W YDR391CQ04170 232 aa13.14□□□□□ -0.31
RTC3YHR087W RFU1Q08003 200 aa13.14□□□□□ -0.31
RTC3YHR087W MOH1P38191 138 aa13.13□□□□□ -0.31
RTC3YHR087W YND1P40009 630 aa13.13□□□□□ -0.31
RTC3YHR087W GWT1P47026 490 aa13.13□□□□□ -0.31
RTC3YHR087W ELA1P53861 379 aaPredicted RBP13.13□□□□□ -0.31
RTC3YHR087W ALG9P53868 555 aaKnown RBP13.13□□□□□ -0.31
RTC3YHR087W YNL092WP53934 400 aa13.13□□□□□ -0.31
RTC3YHR087W YBR085C-AO43137 85 aa13.12□□□□□ -0.31
RTC3YHR087W GAL1P04385 528 aa13.12□□□□□ -0.31
RTC3YHR087W SPS4P09937 338 aa13.12□□□□□ -0.31
RTC3YHR087W PEX4P29340 183 aa13.12□□□□□ -0.31
RTC3YHR087W LAG1P38703 411 aa13.12□□□□□ -0.31
RTC3YHR087W DLT1Q04216 342 aa13.12□□□□□ -0.31
RTC3YHR087W ANT1Q06497 328 aa13.12□□□□□ -0.31
RTC3YHR087W FEX2Q08991 375 aa13.12□□□□□ -0.31
RTC3YHR087W DEG1P31115 442 aaKnown RBP13.11□□□□□ -0.31
RTC3YHR087W REC114P32841 428 aa13.11□□□□□ -0.31
RTC3YHR087W YBR197CP38306 217 aa13.11□□□□□ -0.31
RTC3YHR087W ATF1P40353 525 aa13.11□□□□□ -0.31
RTC3YHR087W CAB5Q03941 241 aa13.11□□□□□ -0.31
RTC3YHR087W NOC4Q06512 552 aaPredicted RBP13.11□□□□□ -0.31
RTC3YHR087W VAM3Q12241 283 aa13.11□□□□□ -0.31
RTC3YHR087W ISN1Q99312 450 aa13.11□□□□□ -0.31
RTC3YHR087W MIR1P23641 311 aaKnown RBP13.1□□□□□ -0.31
RTC3YHR087W YCR101CP25607 182 aa13.1□□□□□ -0.31
RTC3YHR087W MRP20P32387 263 aa13.1□□□□□ -0.31
RTC3YHR087W AGA2P32781 87 aa13.1□□□□□ -0.31
RTC3YHR087W TAD2P47058 250 aa13.1□□□□□ -0.31
RTC3YHR087W YJR011CP47086 261 aaPredicted RBP13.1□□□□□ -0.31
RTC3YHR087W YNR040WP53736 256 aa13.1□□□□□ -0.31
RTC3YHR087W RTT103Q05543 409 aa13.1□□□□□ -0.31
RTC3YHR087W TFC7Q12415 435 aa13.1□□□□□ -0.31
RTC3YHR087W HUT1Q12520 339 aa13.1□□□□□ -0.31
RTC3YHR087W UBA3Q99344 299 aa13.1□□□□□ -0.31
RTC3YHR087W FAT1P38225 669 aa13.09□□□□□ -0.31
RTC3YHR087W MTC6P38849 526 aa13.09□□□□□ -0.31
RTC3YHR087W RPS26AP39938 119 aaKnown RBP13.09□□□□□ -0.31
RTC3YHR087W RPS26BP39939 119 aaKnown RBP13.09□□□□□ -0.31
RTC3YHR087W MID1P41821 548 aa13.09□□□□□ -0.31
RTC3YHR087W SSN8P47821 323 aa13.09□□□□□ -0.31
RTC3YHR087W UFD1P53044 361 aa13.09□□□□□ -0.31
RTC3YHR087W RCE1Q03530 315 aa13.09□□□□□ -0.31
RTC3YHR087W SEC22P22214 214 aa13.08□□□□□ -0.32
RTC3YHR087W ARC40P38328 384 aaKnown RBP13.08□□□□□ -0.32
RTC3YHR087W YEL057CP39983 233 aa13.08□□□□□ -0.32
RTC3YHR087W RPL13BP40212 199 aaKnown RBP13.08□□□□□ -0.32
RTC3YHR087W ISU1Q03020 165 aa13.08□□□□□ -0.32
RTC3YHR087W NRG1Q03125 231 aa13.08□□□□□ -0.32
RTC3YHR087W RAF1Q06891 181 aa13.08□□□□□ -0.32
RTC3YHR087W MED4Q12343 284 aa13.08□□□□□ -0.32
RTC3YHR087W RPL13AQ12690 199 aaPredicted RBP13.08□□□□□ -0.32
RTC3YHR087W TPI1P00942 248 aaKnown RBP13.07□□□□□ -0.32
RTC3YHR087W QCR2P07257 368 aa13.07□□□□□ -0.32
RTC3YHR087W EMP24P32803 203 aaKnown RBP13.07□□□□□ -0.32
RTC3YHR087W HAS1Q03532 505 aaKnown RBP13.07□□□□□ -0.32
RTC3YHR087W YMR262WP38430 313 aa13.06□□□□□ -0.32
RTC3YHR087W UBP8P50102 471 aa13.06□□□□□ -0.32
RTC3YHR087W RPN14P53196 417 aa13.06□□□□□ -0.32
RTC3YHR087W GRC3Q07845 632 aa13.06□□□□□ -0.32
RTC3YHR087W ATP14Q12349 124 aa13.06□□□□□ -0.32
RTC3YHR087W ARO3P14843 370 aaKnown RBP13.05□□□□□ -0.32
RTC3YHR087W SAG1P20840 650 aa13.05□□□□□ -0.32
RTC3YHR087W VMA8P32610 256 aaKnown RBP13.05□□□□□ -0.32
RTC3YHR087W GCV3P39726 170 aaPredicted RBP13.05□□□□□ -0.32
RTC3YHR087W PHB1P40961 287 aa13.05□□□□□ -0.32
RTC3YHR087W TIM44Q01852 431 aa13.05□□□□□ -0.32
RTC3YHR087W THI74Q04083 370 aa13.05□□□□□ -0.32
RTC3YHR087W YDL086WQ07505 273 aa13.05□□□□□ -0.32
RTC3YHR087W YOR186WQ08560 144 aa13.05□□□□□ -0.32
RTC3YHR087W BLM10P43583 2143 aa13.04□□□□□ -0.32
RTC3YHR087W MRPS5P33759 307 aa13.04□□□□□ -0.32
RTC3YHR087W MCH2P36032 473 aa13.04□□□□□ -0.32
RTC3YHR087W COS8P38723 381 aa13.04□□□□□ -0.32
RTC3YHR087W OSH7P38755 437 aa13.04□□□□□ -0.32
RTC3YHR087W ASP1P38986 381 aaPredicted RBP13.04□□□□□ -0.32
RTC3YHR087W YER084WP40057 128 aa13.04□□□□□ -0.32
RTC3YHR087W CCS1P40202 249 aaKnown RBP13.04□□□□□ -0.32
RTC3YHR087W YIR035CP40579 254 aa13.04□□□□□ -0.32
RTC3YHR087W GLR1P41921 483 aaKnown RBP13.04□□□□□ -0.32
RTC3YHR087W YIP5P53108 310 aa13.04□□□□□ -0.32
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms