RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W YDR209CQ03480 137 aa1.23□□□□□ -2.21
VMA21YGR105W ADH6Q04894 360 aaKnown RBP1.23□□□□□ -2.21
VMA21YGR105W INM2Q05533 292 aa1.23□□□□□ -2.21
VMA21YGR105W YPR098CQ06089 161 aa1.23□□□□□ -2.21
VMA21YGR105W SIR4P11978 1358 aa1.22□□□□□ -2.21
VMA21YGR105W RPL9AP05738 191 aaKnown RBP1.22□□□□□ -2.21
VMA21YGR105W HOM6P31116 359 aaKnown RBP1.22□□□□□ -2.21
VMA21YGR105W MRX3P38172 270 aa1.22□□□□□ -2.21
VMA21YGR105W FIS1P40515 155 aa1.22□□□□□ -2.21
VMA21YGR105W RPL9BP51401 191 aaKnown RBP1.22□□□□□ -2.21
VMA21YGR105W NUP49Q02199 472 aa1.22□□□□□ -2.21
VMA21YGR105W NEJ1Q06148 342 aa1.22□□□□□ -2.21
VMA21YGR105W YPR172WQ06608 200 aa1.22□□□□□ -2.21
VMA21YGR105W YPL257WQ08974 193 aa1.22□□□□□ -2.21
VMA21YGR105W YHR180WP38868 163 aa1.21□□□□□ -2.22
VMA21YGR105W MEP1P40260 492 aa1.21□□□□□ -2.22
VMA21YGR105W YKE4P40544 346 aa1.21□□□□□ -2.22
VMA21YGR105W ATG39Q06159 398 aa1.21□□□□□ -2.22
VMA21YGR105W CYR1P08678 2026 aaKnown RBP1.21□□□□□ -2.22
VMA21YGR105W MSW1P04803 379 aa1.2□□□□□ -2.22
VMA21YGR105W EBP2P36049 427 aaKnown RBP1.2□□□□□ -2.22
VMA21YGR105W RMR1P53060 241 aa1.2□□□□□ -2.22
VMA21YGR105W ARR2Q06597 130 aa1.2□□□□□ -2.22
VMA21YGR105W CSI2Q08054 341 aa1.2□□□□□ -2.22
VMA21YGR105W RRS1Q08746 203 aaKnown RBP1.2□□□□□ -2.22
VMA21YGR105W IPP1P00817 287 aaKnown RBP1.19□□□□□ -2.22
VMA21YGR105W OM45P16547 393 aa1.19□□□□□ -2.22
VMA21YGR105W GRX2P17695 143 aaKnown RBP1.19□□□□□ -2.22
VMA21YGR105W YGL010WP25338 174 aa1.19□□□□□ -2.22
VMA21YGR105W YPT52P36018 234 aaKnown RBP1.19□□□□□ -2.22
VMA21YGR105W BIG1P38813 335 aa1.19□□□□□ -2.22
VMA21YGR105W PET100P38958 111 aa1.19□□□□□ -2.22
VMA21YGR105W AVT2P39981 480 aa1.19□□□□□ -2.22
VMA21YGR105W AGE2P40529 298 aa1.19□□□□□ -2.22
VMA21YGR105W USE1P53146 245 aa1.19□□□□□ -2.22
VMA21YGR105W YNL046WP53956 172 aa1.19□□□□□ -2.22
VMA21YGR105W HEM25Q07534 307 aa1.19□□□□□ -2.22
VMA21YGR105W USB1Q12208 290 aaKnown RBP1.19□□□□□ -2.22
VMA21YGR105W SNA3P14359 133 aa1.18□□□□□ -2.22
VMA21YGR105W YIL001WP40560 513 aa1.18□□□□□ -2.22
VMA21YGR105W RHO3Q00245 231 aaKnown RBP1.18□□□□□ -2.22
VMA21YGR105W SDO1Q07953 250 aaKnown RBP1.18□□□□□ -2.22
VMA21YGR105W HTL1Q9URQ5 78 aa1.18□□□□□ -2.22
VMA21YGR105W RNA15P25299 296 aaPredicted RBP1.17□□□□□ -2.22
VMA21YGR105W YBR220CP38318 560 aa1.17□□□□□ -2.22
VMA21YGR105W BUD25P85052 153 aa1.17□□□□□ -2.22
VMA21YGR105W SML1Q04964 104 aa1.17□□□□□ -2.22
VMA21YGR105W MSA1Q08471 629 aa1.17□□□□□ -2.22
VMA21YGR105W NIP7Q08962 181 aaKnown RBP1.17□□□□□ -2.22
VMA21YGR105W FLO9P39712 1322 aa1.16□□□□□ -2.22
VMA21YGR105W RPL2AP0CX45 254 aaKnown RBP1.16□□□□□ -2.22
VMA21YGR105W RPL2BP0CX46 254 aaKnown RBP1.16□□□□□ -2.22
VMA21YGR105W PET9P18239 318 aaKnown RBP1.16□□□□□ -2.22
VMA21YGR105W FPR1P20081 114 aaKnown RBP1.16□□□□□ -2.22
VMA21YGR105W RPS5P26783 225 aaKnown RBP1.16□□□□□ -2.22
VMA21YGR105W YHR127WP38833 243 aaKnown RBP1.16□□□□□ -2.22
VMA21YGR105W BFR1P38934 470 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
VMA21YGR105W YAR068WP39564 161 aa1.16□□□□□ -2.22
VMA21YGR105W RPA43P46669 326 aa1.16□□□□□ -2.22
VMA21YGR105W MPP6P53725 186 aaPredicted RBP1.16□□□□□ -2.22
VMA21YGR105W YNR062CP53748 327 aa1.16□□□□□ -2.22
VMA21YGR105W YLR162WQ06235 118 aa1.16□□□□□ -2.22
VMA21YGR105W BTS1Q12051 335 aa1.16□□□□□ -2.22
VMA21YGR105W YCT1Q12235 531 aa1.16□□□□□ -2.22
VMA21YGR105W MSF1P08425 469 aa1.15□□□□□ -2.23
VMA21YGR105W RPF1P38805 295 aaKnown RBP1.15□□□□□ -2.23
VMA21YGR105W JHD2P47156 728 aaPredicted RBP1.15□□□□□ -2.23
VMA21YGR105W MZM1Q03429 123 aaPredicted RBP1.15□□□□□ -2.23
VMA21YGR105W SNU23Q12368 194 aaPredicted RBP1.15□□□□□ -2.23
VMA21YGR105W YPL229WQ99395 206 aa1.15□□□□□ -2.23
VMA21YGR105W FCY2P17064 533 aa1.14□□□□□ -2.23
VMA21YGR105W ERD2P18414 219 aa1.14□□□□□ -2.23
VMA21YGR105W ECM33P38248 429 aaKnown RBP1.14□□□□□ -2.23
VMA21YGR105W SVP26P38869 228 aa1.14□□□□□ -2.23
VMA21YGR105W YJR056CP47115 236 aa1.14□□□□□ -2.23
VMA21YGR105W TOS8P53147 276 aa1.14□□□□□ -2.23
VMA21YGR105W CAT5P41735 233 aa1.13□□□□□ -2.23
VMA21YGR105W YJR079WP47126 109 aa1.13□□□□□ -2.23
VMA21YGR105W SEI1Q06058 285 aa1.13□□□□□ -2.23
VMA21YGR105W CSM4Q08955 156 aa1.13□□□□□ -2.23
VMA21YGR105W YOL107WQ12239 342 aa1.13□□□□□ -2.23
VMA21YGR105W YOR029WQ12243 111 aa1.13□□□□□ -2.23
VMA21YGR105W YOR020W-AQ3E824 90 aa1.13□□□□□ -2.23
VMA21YGR105W YHR139C-AO13536 103 aa1.12□□□□□ -2.23
VMA21YGR105W RTT105P40063 208 aa1.12□□□□□ -2.23
VMA21YGR105W HAM1P47119 197 aaKnown RBP1.12□□□□□ -2.23
VMA21YGR105W MSH5Q12175 901 aa1.12□□□□□ -2.23
VMA21YGR105W TPO4Q12256 659 aa1.12□□□□□ -2.23
VMA21YGR105W TCP1P12612 559 aaKnown RBP1.11□□□□□ -2.23
VMA21YGR105W RSR1P13856 272 aa1.11□□□□□ -2.23
VMA21YGR105W RPL13BP40212 199 aaKnown RBP1.11□□□□□ -2.23
VMA21YGR105W RPL33BP41056 107 aaKnown RBP1.11□□□□□ -2.23
VMA21YGR105W YLR126CQ12288 251 aa1.11□□□□□ -2.23
VMA21YGR105W RPL13AQ12690 199 aaPredicted RBP1.11□□□□□ -2.23
VMA21YGR105W CDC8P00572 216 aa1.1□□□□□ -2.23
VMA21YGR105W UPS2P35200 230 aa1.1□□□□□ -2.23
VMA21YGR105W YKL075CP36083 450 aa1.1□□□□□ -2.23
VMA21YGR105W YBR063CP38083 404 aa1.1□□□□□ -2.23
VMA21YGR105W YMR144WP40214 342 aaKnown RBP1.1□□□□□ -2.23
VMA21YGR105W ERV29P53337 310 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms