RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C TY2B-CP25384 1770 aa1.82□□□□□ -2.12
PRP38YGR075C USO1P25386 1790 aa1.82□□□□□ -2.12
PRP38YGR075C TY2B-DR2Q03494 1770 aa1.82□□□□□ -2.12
PRP38YGR075C TY1B-DR1Q03855 1755 aa1.82□□□□□ -2.12
PRP38YGR075C TY2B-DR3Q07791 1770 aaKnown RBP1.82□□□□□ -2.12
PRP38YGR075C TY2B-OR1Q12113 1770 aa1.82□□□□□ -2.12
PRP38YGR075C TY2B-DR1Q12472 1770 aa1.82□□□□□ -2.12
PRP38YGR075C TY2B-OR2Q12501 1770 aa1.82□□□□□ -2.12
PRP38YGR075C PDR10P51533 1564 aa1.81□□□□□ -2.12
PRP38YGR075C RAD10P06838 210 aa1.81□□□□□ -2.12
PRP38YGR075C SGA1P08019 549 aa1.81□□□□□ -2.12
PRP38YGR075C MATALPHA1P0CY06 175 aa1.81□□□□□ -2.12
PRP38YGR075C HMLALPHA1P0CY07 175 aa1.81□□□□□ -2.12
PRP38YGR075C YCR102CP25608 368 aa1.81□□□□□ -2.12
PRP38YGR075C SRB4P32569 687 aa1.81□□□□□ -2.12
PRP38YGR075C PIR5P46999 287 aa1.81□□□□□ -2.12
PRP38YGR075C YJR141WP47172 347 aaPredicted RBP1.81□□□□□ -2.12
PRP38YGR075C SYF2P53277 215 aaPredicted RBP1.81□□□□□ -2.12
PRP38YGR075C NOP13P53883 403 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
PRP38YGR075C RHO3Q00245 231 aaKnown RBP1.81□□□□□ -2.12
PRP38YGR075C YMR114CQ04471 368 aaKnown RBP1.81□□□□□ -2.12
PRP38YGR075C RNH1Q04740 348 aa1.81□□□□□ -2.12
PRP38YGR075C YOR186WQ08560 144 aa1.81□□□□□ -2.12
PRP38YGR075C RRS1Q08746 203 aaKnown RBP1.81□□□□□ -2.12
PRP38YGR075C YPR011CQ12251 326 aa1.81□□□□□ -2.12
PRP38YGR075C PST1Q12355 444 aa1.81□□□□□ -2.12
PRP38YGR075C GEP5Q12393 293 aa1.81□□□□□ -2.12
PRP38YGR075C TY1B-HO13535 1793 aa1.8□□□□□ -2.12
PRP38YGR075C TY1B-DR5P0C2I2 1755 aa1.8□□□□□ -2.12
PRP38YGR075C TY1B-DR6P0C2I3 1755 aa1.8□□□□□ -2.12
PRP38YGR075C TY1B-LR2P0C2I5 1755 aa1.8□□□□□ -2.12
PRP38YGR075C TY1B-LR3P0C2I6 1755 aaKnown RBP1.8□□□□□ -2.12
PRP38YGR075C TY1B-PR1P0C2I9 1755 aaKnown RBP1.8□□□□□ -2.12
PRP38YGR075C TY1B-PR2P0C2J0 1756 aa1.8□□□□□ -2.12
PRP38YGR075C TY1B-PR3P0C2J1 1755 aaKnown RBP1.8□□□□□ -2.12
PRP38YGR075C TY1B-JR1P47098 1755 aa1.8□□□□□ -2.12
PRP38YGR075C TY1B-ML2Q03434 1755 aaKnown RBP1.8□□□□□ -2.12
PRP38YGR075C TY1B-ER1Q03612 1755 aa1.8□□□□□ -2.12
PRP38YGR075C TY1B-ML1Q04711 1755 aaKnown RBP1.8□□□□□ -2.12
PRP38YGR075C TY1B-GR2Q12269 1755 aa1.8□□□□□ -2.12
PRP38YGR075C TY1B-OLQ12273 1755 aa1.8□□□□□ -2.12
PRP38YGR075C TY1B-PLQ12414 1755 aaKnown RBP1.8□□□□□ -2.12
PRP38YGR075C DPM1P14020 267 aaKnown RBP1.8□□□□□ -2.12
PRP38YGR075C SEC22P22214 214 aa1.8□□□□□ -2.12
PRP38YGR075C MRPL25P23369 157 aa1.8□□□□□ -2.12
PRP38YGR075C MRPL39P36533 70 aa1.8□□□□□ -2.12
PRP38YGR075C SSH1P38353 490 aaKnown RBP1.8□□□□□ -2.12
PRP38YGR075C YHR127WP38833 243 aaKnown RBP1.8□□□□□ -2.12
PRP38YGR075C RTR1P40084 226 aaPredicted RBP1.8□□□□□ -2.12
PRP38YGR075C YER189WP40104 122 aa1.8□□□□□ -2.12
PRP38YGR075C RPC17P47076 161 aa1.8□□□□□ -2.12
PRP38YGR075C RSM10Q03201 203 aa1.8□□□□□ -2.12
PRP38YGR075C SEI1Q06058 285 aa1.8□□□□□ -2.12
PRP38YGR075C SPO77Q06134 477 aa1.8□□□□□ -2.12
PRP38YGR075C SLD7Q08457 257 aa1.8□□□□□ -2.12
PRP38YGR075C RUD3Q12234 484 aaKnown RBP1.8□□□□□ -2.12
PRP38YGR075C SPP41P38904 1435 aa1.8□□□□□ -2.12
PRP38YGR075C TOR1P35169 2470 aa1.8□□□□□ -2.12
PRP38YGR075C GDB1Q06625 1536 aa1.8□□□□□ -2.12
PRP38YGR075C BMH2P34730 273 aaKnown RBP1.79□□□□□ -2.12
PRP38YGR075C YER188WP40103 239 aa1.79□□□□□ -2.12
PRP38YGR075C TIF34P40217 347 aaKnown RBP1.79□□□□□ -2.12
PRP38YGR075C GCN20P43535 752 aaKnown RBP1.79□□□□□ -2.12
PRP38YGR075C OTU1P43558 301 aa1.79□□□□□ -2.12
PRP38YGR075C GON7P46984 123 aa1.79□□□□□ -2.12
PRP38YGR075C CAB4P53332 305 aa1.79□□□□□ -2.12
PRP38YGR075C SSU72P53538 206 aaPredicted RBP1.79□□□□□ -2.12
PRP38YGR075C YNL046WP53956 172 aa1.79□□□□□ -2.12
PRP38YGR075C SWI1P09547 1314 aa1.79□□□□□ -2.12
PRP38YGR075C SPO14P36126 1683 aa1.79□□□□□ -2.12
PRP38YGR075C RPO21P04050 1733 aaKnown RBP1.79□□□□□ -2.12
PRP38YGR075C YLR462WO13556 202 aa1.78□□□□□ -2.12
PRP38YGR075C RPL26AP05743 127 aaKnown RBP1.78□□□□□ -2.12
PRP38YGR075C ERD2P18414 219 aa1.78□□□□□ -2.12
PRP38YGR075C VPS21P36017 210 aaKnown RBP1.78□□□□□ -2.12
PRP38YGR075C CUE1P38428 203 aa1.78□□□□□ -2.12
PRP38YGR075C YEL075CP39972 122 aa1.78□□□□□ -2.12
PRP38YGR075C COG3P40094 801 aa1.78□□□□□ -2.12
PRP38YGR075C YJL016WP47072 561 aa1.78□□□□□ -2.12
PRP38YGR075C RPL26BP53221 127 aaKnown RBP1.78□□□□□ -2.12
PRP38YGR075C YLR179CQ06252 201 aaKnown RBP1.78□□□□□ -2.12
PRP38YGR075C YLR126CQ12288 251 aa1.78□□□□□ -2.12
PRP38YGR075C YPL229WQ99395 206 aa1.78□□□□□ -2.12
PRP38YGR075C VPS13Q07878 3144 aa1.78□□□□□ -2.12
PRP38YGR075C TRM3Q07527 1436 aa1.77□□□□□ -2.13
PRP38YGR075C RHO1P06780 209 aaKnown RBP1.77□□□□□ -2.13
PRP38YGR075C SNA3P14359 133 aa1.77□□□□□ -2.13
PRP38YGR075C RPL24BP24000 155 aaKnown RBP1.77□□□□□ -2.13
PRP38YGR075C NTF2P33331 125 aaKnown RBP1.77□□□□□ -2.13
PRP38YGR075C RCN1P36054 211 aa1.77□□□□□ -2.13
PRP38YGR075C YAP3P38749 330 aa1.77□□□□□ -2.13
PRP38YGR075C MSS2P40990 351 aa1.77□□□□□ -2.13
PRP38YGR075C OST2P46964 130 aa1.77□□□□□ -2.13
PRP38YGR075C YJR149WP47177 404 aa1.77□□□□□ -2.13
PRP38YGR075C PEX12Q04370 399 aa1.77□□□□□ -2.13
PRP38YGR075C FAR8Q05040 523 aa1.77□□□□□ -2.13
PRP38YGR075C TY2B-BQ12491 1770 aa1.77□□□□□ -2.13
PRP38YGR075C ULS1Q08562 1619 aa1.77□□□□□ -2.13
PRP38YGR075C MMS22Q06164 1454 aa1.76□□□□□ -2.13
PRP38YGR075C FKS1P38631 1876 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 423.7 ms