RNA–Protein interactions for RNA: YER042W

MXR1, Transcript of Methionine-S-sulfoxide reductase, yeast

Gene MXR1, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MXR1	YER042W	CSI2	Q08054	341 aa		0.93	□□□□□ -2.26
MXR1	YER042W	YOR186W	Q08560	144 aa		0.93	□□□□□ -2.26
MXR1	YER042W	MRP1	P10662	321 aa	Known RBP	0.92	□□□□□ -2.26
MXR1	YER042W	VTC1	P40046	129 aa	RIP-Chip data	0.92	□□□□□ -2.26	not detected
MXR1	YER042W	EMC2	P47133	292 aa	Known RBP	0.92	□□□□□ -2.26
MXR1	YER042W	ADH6	Q04894	360 aa	Known RBP	0.92	□□□□□ -2.26
MXR1	YER042W	YPR098C	Q06089	161 aa		0.92	□□□□□ -2.26
MXR1	YER042W	NEJ1	Q06148	342 aa		0.92	□□□□□ -2.26
MXR1	YER042W	MSW1	P04803	379 aa		0.91	□□□□□ -2.26
MXR1	YER042W	RPL9A	P05738	191 aa	Known RBP	0.91	□□□□□ -2.26
MXR1	YER042W	YGL010W	P25338	174 aa		0.91	□□□□□ -2.26
MXR1	YER042W	SGE1	P33335	543 aa		0.91	□□□□□ -2.26
MXR1	YER042W	YPT52	P36018	234 aa	Known RBP	0.91	□□□□□ -2.26
MXR1	YER042W	EBP2	P36049	427 aa	Known RBP	0.91	□□□□□ -2.26
MXR1	YER042W	MRPL39	P36533	70 aa		0.91	□□□□□ -2.26
MXR1	YER042W	FZO1	P38297	855 aa		0.91	□□□□□ -2.26
MXR1	YER042W	YBR220C	P38318	560 aa		0.91	□□□□□ -2.26
MXR1	YER042W	AVT2	P39981	480 aa		0.91	□□□□□ -2.26
MXR1	YER042W	MEP1	P40260	492 aa		0.91	□□□□□ -2.26
MXR1	YER042W	YKE4	P40544	346 aa		0.91	□□□□□ -2.26
MXR1	YER042W	RPL9B	P51401	191 aa	Known RBP	0.91	□□□□□ -2.26
MXR1	YER042W	YNL046W	P53956	172 aa		0.91	□□□□□ -2.26
MXR1	YER042W	ATG39	Q06159	398 aa		0.91	□□□□□ -2.26
MXR1	YER042W	ARR2	Q06597	130 aa		0.91	□□□□□ -2.26
MXR1	YER042W	MSA1	Q08471	629 aa		0.91	□□□□□ -2.26
MXR1	YER042W	RPL24A	P04449	155 aa	Known RBP	0.9	□□□□□ -2.27
MXR1	YER042W	RPL2A	P0CX45	254 aa	Known RBP	0.9	□□□□□ -2.27
MXR1	YER042W	RPL2B	P0CX46	254 aa	Known RBP	0.9	□□□□□ -2.27
MXR1	YER042W	SNA3	P14359	133 aa		0.9	□□□□□ -2.27
MXR1	YER042W	DAL82	P21705	255 aa		0.9	□□□□□ -2.27
MXR1	YER042W	BIG1	P38813	335 aa		0.9	□□□□□ -2.27
MXR1	YER042W	FIS1	P40515	155 aa		0.9	□□□□□ -2.27
MXR1	YER042W	AGE2	P40529	298 aa		0.9	□□□□□ -2.27
MXR1	YER042W	RPA43	P46669	326 aa		0.9	□□□□□ -2.27
MXR1	YER042W	MZM1	Q03429	123 aa	Predicted RBP	0.9	□□□□□ -2.27
MXR1	YER042W	YDR209C	Q03480	137 aa		0.9	□□□□□ -2.27
MXR1	YER042W	YLR162W	Q06235	118 aa		0.9	□□□□□ -2.27
MXR1	YER042W	HEM25	Q07534	307 aa		0.9	□□□□□ -2.27
MXR1	YER042W	YPL257W	Q08974	193 aa		0.9	□□□□□ -2.27
MXR1	YER042W	USB1	Q12208	290 aa	Known RBP	0.9	□□□□□ -2.27
MXR1	YER042W	YPL229W	Q99395	206 aa		0.9	□□□□□ -2.27
MXR1	YER042W	RPS5	P26783	225 aa	Known RBP	0.89	□□□□□ -2.27
MXR1	YER042W	RMR1	P53060	241 aa		0.89	□□□□□ -2.27
MXR1	YER042W	USE1	P53146	245 aa		0.89	□□□□□ -2.27
MXR1	YER042W	RHO3	Q00245	231 aa	Known RBP	0.89	□□□□□ -2.27
MXR1	YER042W	FLO9	P39712	1322 aa		0.89	□□□□□ -2.27
MXR1	YER042W	YHR139C-A	O13536	103 aa		0.88	□□□□□ -2.27
MXR1	YER042W	IPP1	P00817	287 aa	Known RBP	0.88	□□□□□ -2.27
MXR1	YER042W	FPR1	P20081	114 aa	Known RBP	0.88	□□□□□ -2.27
MXR1	YER042W	YIL001W	P40560	513 aa		0.88	□□□□□ -2.27
MXR1	YER042W	NUP57	P48837	541 aa		0.88	□□□□□ -2.27
MXR1	YER042W	YNR062C	P53748	327 aa		0.88	□□□□□ -2.27
MXR1	YER042W	SML1	Q04964	104 aa		0.88	□□□□□ -2.27
MXR1	YER042W	SDO1	Q07953	250 aa	Known RBP	0.88	□□□□□ -2.27
MXR1	YER042W	RRS1	Q08746	203 aa	Known RBP	0.88	□□□□□ -2.27
MXR1	YER042W	NIP7	Q08962	181 aa	Known RBP	0.88	□□□□□ -2.27
MXR1	YER042W	PET9	P18239	318 aa	Known RBP	0.87	□□□□□ -2.27
MXR1	YER042W	ECM33	P38248	429 aa	Known RBP	0.87	□□□□□ -2.27
MXR1	YER042W	JHD2	P47156	728 aa	Predicted RBP	0.87	□□□□□ -2.27
MXR1	YER042W	BUD25	P85052	153 aa		0.87	□□□□□ -2.27
MXR1	YER042W	HTL1	Q9URQ5	78 aa		0.87	□□□□□ -2.27
MXR1	YER042W	MSF1	P08425	469 aa		0.86	□□□□□ -2.27
MXR1	YER042W	TCP1	P12612	559 aa	Known RBP	0.86	□□□□□ -2.27
MXR1	YER042W	OM45	P16547	393 aa		0.86	□□□□□ -2.27
MXR1	YER042W	ERD2	P18414	219 aa		0.86	□□□□□ -2.27
MXR1	YER042W	RNA15	P25299	296 aa	Predicted RBP	0.86	□□□□□ -2.27
MXR1	YER042W	RPF1	P38805	295 aa	Known RBP	0.86	□□□□□ -2.27
MXR1	YER042W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
MXR1	YER042W	PET100	P38958	111 aa		0.86	□□□□□ -2.27
MXR1	YER042W	YAR068W	P39564	161 aa		0.86	□□□□□ -2.27
MXR1	YER042W	GPI8	P49018	411 aa		0.86	□□□□□ -2.27
MXR1	YER042W	TOS8	P53147	276 aa		0.86	□□□□□ -2.27
MXR1	YER042W	MPP6	P53725	186 aa	Predicted RBP	0.86	□□□□□ -2.27
MXR1	YER042W	SEI1	Q06058	285 aa		0.86	□□□□□ -2.27
MXR1	YER042W	YCT1	Q12235	531 aa		0.86	□□□□□ -2.27
MXR1	YER042W	FCY2	P17064	533 aa		0.85	□□□□□ -2.27
MXR1	YER042W	UPS2	P35200	230 aa		0.85	□□□□□ -2.27
MXR1	YER042W	YHR127W	P38833	243 aa	Known RBP	0.85	□□□□□ -2.27
MXR1	YER042W	SVP26	P38869	228 aa		0.85	□□□□□ -2.27
MXR1	YER042W	RPL33B	P41056	107 aa	Known RBP	0.85	□□□□□ -2.27
MXR1	YER042W	CAT5	P41735	233 aa		0.85	□□□□□ -2.27
MXR1	YER042W	YJR056C	P47115	236 aa		0.85	□□□□□ -2.27
MXR1	YER042W	YJR079W	P47126	109 aa		0.85	□□□□□ -2.27
MXR1	YER042W	SPG3	Q04398	127 aa	Predicted RBP	0.85	□□□□□ -2.27
MXR1	YER042W	YOR029W	Q12243	111 aa		0.85	□□□□□ -2.27
MXR1	YER042W	RSR1	P13856	272 aa		0.84	□□□□□ -2.27
MXR1	YER042W	RTT105	P40063	208 aa		0.84	□□□□□ -2.27
MXR1	YER042W	CSM4	Q08955	156 aa		0.84	□□□□□ -2.27
MXR1	YER042W	BTS1	Q12051	335 aa		0.84	□□□□□ -2.27
MXR1	YER042W	MSH5	Q12175	901 aa		0.84	□□□□□ -2.27
MXR1	YER042W	YOR020W-A	Q3E824	90 aa		0.84	□□□□□ -2.27
MXR1	YER042W	YKL075C	P36083	450 aa		0.83	□□□□□ -2.28
MXR1	YER042W	RPL13B	P40212	199 aa	Known RBP	0.83	□□□□□ -2.28
MXR1	YER042W	BOL2	P53082	120 aa		0.83	□□□□□ -2.28
MXR1	YER042W	TRM12	Q04235	462 aa		0.83	□□□□□ -2.28
MXR1	YER042W	YOL107W	Q12239	342 aa		0.83	□□□□□ -2.28
MXR1	YER042W	TPO4	Q12256	659 aa		0.83	□□□□□ -2.28
MXR1	YER042W	YLR126C	Q12288	251 aa		0.83	□□□□□ -2.28
MXR1	YER042W	SNU23	Q12368	194 aa	Predicted RBP	0.83	□□□□□ -2.28
MXR1	YER042W	RRP36	Q12481	300 aa	Predicted RBP	0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms