RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W HEM4P06174 275 aa8.24□□□□□ -1.09
SED1YDR077W ARO3P14843 370 aaKnown RBP8.24□□□□□ -1.09
SED1YDR077W RFA1P22336 621 aaKnown RBP8.24□□□□□ -1.09
SED1YDR077W IFM1P25038 676 aa8.24□□□□□ -1.09
SED1YDR077W YCR016WP25617 290 aaKnown RBP8.24□□□□□ -1.09
SED1YDR077W MCH2P36032 473 aa8.24□□□□□ -1.09
SED1YDR077W SIT1P39980 628 aa8.24□□□□□ -1.09
SED1YDR077W PHM8P40025 321 aa8.24□□□□□ -1.09
SED1YDR077W SYG1P40528 902 aa8.24□□□□□ -1.09
SED1YDR077W OKP1P53298 406 aa8.24□□□□□ -1.09
SED1YDR077W FOL3Q12676 427 aaPredicted RBP8.24□□□□□ -1.09
SED1YDR077W CDC28P00546 298 aaKnown RBP8.23□□□□□ -1.09
SED1YDR077W PUT1P09368 476 aa8.23□□□□□ -1.09
SED1YDR077W CKS1P20486 150 aaKnown RBP8.23□□□□□ -1.09
SED1YDR077W POP8P38208 133 aa8.23□□□□□ -1.09
SED1YDR077W ARO9P38840 513 aaPredicted RBP8.23□□□□□ -1.09
SED1YDR077W AIM46P38885 310 aa8.23□□□□□ -1.09
SED1YDR077W BFR1P38934 470 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09 RIP-Chip
SED1YDR077W YIL029CP40538 142 aa8.23□□□□□ -1.09
SED1YDR077W YGR210CP42942 411 aa8.23□□□□□ -1.09
SED1YDR077W SSN8P47821 323 aa8.23□□□□□ -1.09
SED1YDR077W SIP18P50263 79 aa8.23□□□□□ -1.09
SED1YDR077W UFD1P53044 361 aa8.23□□□□□ -1.09
SED1YDR077W LAP3Q01532 483 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
SED1YDR077W CAB5Q03941 241 aa8.23□□□□□ -1.09
SED1YDR077W SYM1Q06563 197 aa8.23□□□□□ -1.09
SED1YDR077W FIT3Q08907 204 aa8.23□□□□□ -1.09
SED1YDR077W COX17Q12287 69 aa8.23□□□□□ -1.09
SED1YDR077W RTR2Q12378 196 aa8.23□□□□□ -1.09
SED1YDR077W MET3P08536 511 aa8.22□□□□□ -1.09
SED1YDR077W ATG15P25641 520 aa8.22□□□□□ -1.09
SED1YDR077W PEX4P29340 183 aa8.22□□□□□ -1.09
SED1YDR077W REC114P32841 428 aa8.22□□□□□ -1.09
SED1YDR077W GLY1P37303 387 aaKnown RBP8.22□□□□□ -1.09
SED1YDR077W FLX1P40464 311 aa8.22□□□□□ -1.09
SED1YDR077W YJR011CP47086 261 aaPredicted RBP8.22□□□□□ -1.09
SED1YDR077W PRM15Q03262 622 aa8.22□□□□□ -1.09
SED1YDR077W YPR098CQ06089 161 aa8.22□□□□□ -1.09
SED1YDR077W YOR186WQ08560 144 aa8.22□□□□□ -1.09
SED1YDR077W SCP1Q08873 200 aa8.22□□□□□ -1.09
SED1YDR077W MED4Q12343 284 aa8.22□□□□□ -1.09
SED1YDR077W UBA3Q99344 299 aa8.22□□□□□ -1.09
SED1YDR077W GCN1P33892 2672 aaKnown RBP8.21□□□□□ -1.09
SED1YDR077W SAG1P20840 650 aa8.21□□□□□ -1.1
SED1YDR077W MAG1P22134 296 aaKnown RBP8.21□□□□□ -1.1
SED1YDR077W TRR1P29509 319 aaKnown RBP8.21□□□□□ -1.1
SED1YDR077W COS8P38723 381 aa8.21□□□□□ -1.1
SED1YDR077W NIF3P53081 288 aa8.21□□□□□ -1.1
SED1YDR077W ALG12P53730 551 aa8.21□□□□□ -1.1
SED1YDR077W ORM2Q06144 216 aa8.21□□□□□ -1.1
SED1YDR077W YBR298C-AQ8TGK4 73 aa8.21□□□□□ -1.1
SED1YDR077W REP2P03872 296 aa8.2□□□□□ -1.1
SED1YDR077W YCR101CP25607 182 aa8.2□□□□□ -1.1
SED1YDR077W CLB6P32943 380 aa8.2□□□□□ -1.1
SED1YDR077W NAT2P37293 288 aa8.2□□□□□ -1.1
SED1YDR077W FIG1P38224 298 aa8.2□□□□□ -1.1
SED1YDR077W LAG1P38703 411 aa8.2□□□□□ -1.1
SED1YDR077W VMA7P39111 118 aa8.2□□□□□ -1.1
SED1YDR077W OST1P41543 476 aaKnown RBP8.2□□□□□ -1.1
SED1YDR077W GWT1P47026 490 aa8.2□□□□□ -1.1
SED1YDR077W SNX4P47057 423 aa8.2□□□□□ -1.1
SED1YDR077W JAC1P53193 184 aa8.2□□□□□ -1.1
SED1YDR077W RRS1Q08746 203 aaKnown RBP8.2□□□□□ -1.1
SED1YDR077W RPL25P04456 142 aaKnown RBP8.19□□□□□ -1.1
SED1YDR077W YLL053CP0CD98 152 aa8.19□□□□□ -1.1
SED1YDR077W MSI1P13712 422 aa8.19□□□□□ -1.1
SED1YDR077W YCR061WP25639 631 aa8.19□□□□□ -1.1
SED1YDR077W GLC7P32598 312 aaKnown RBP8.19□□□□□ -1.1
SED1YDR077W GEP4P38812 185 aa8.19□□□□□ -1.1
SED1YDR077W SEN34P39707 275 aa8.19□□□□□ -1.1
SED1YDR077W YER079WP40052 210 aaKnown RBP8.19□□□□□ -1.1
SED1YDR077W PIG2P40187 538 aa8.19□□□□□ -1.1
SED1YDR077W YIP5P53108 310 aa8.19□□□□□ -1.1
SED1YDR077W YDC1Q02896 317 aa8.19□□□□□ -1.1
SED1YDR077W HAS1Q03532 505 aaKnown RBP8.19□□□□□ -1.1
SED1YDR077W DLT1Q04216 342 aa8.19□□□□□ -1.1
SED1YDR077W YDR286CQ05530 114 aa8.19□□□□□ -1.1
SED1YDR077W PIN3Q06449 215 aa8.19□□□□□ -1.1
SED1YDR077W NCE102Q12207 173 aaRIP-Chip data8.19□□□□□ -1.1not detected
SED1YDR077W VAM3Q12241 283 aa8.19□□□□□ -1.1
SED1YDR077W EAF3Q12432 401 aa8.19□□□□□ -1.1
SED1YDR077W YGL194C-AQ2V2P6 80 aa8.19□□□□□ -1.1
SED1YDR077W GAL1P04385 528 aa8.18□□□□□ -1.1
SED1YDR077W OCH1P31755 480 aa8.18□□□□□ -1.1
SED1YDR077W AGA2P32781 87 aa8.18□□□□□ -1.1
SED1YDR077W YPC1P38298 316 aa8.18□□□□□ -1.1
SED1YDR077W YBR197CP38306 217 aa8.18□□□□□ -1.1
SED1YDR077W PTI1P39927 425 aaPredicted RBP8.18□□□□□ -1.1
SED1YDR077W YMR144WP40214 342 aaKnown RBP8.18□□□□□ -1.1
SED1YDR077W MRX5P47007 382 aa8.18□□□□□ -1.1
SED1YDR077W UBP8P50102 471 aa8.18□□□□□ -1.1
SED1YDR077W ACS1Q01574 713 aa8.18□□□□□ -1.1
SED1YDR077W RTT103Q05543 409 aa8.18□□□□□ -1.1
SED1YDR077W CRR1Q05790 422 aa8.18□□□□□ -1.1
SED1YDR077W FEX1Q08913 375 aa8.18□□□□□ -1.1
SED1YDR077W FEX2Q08991 375 aa8.18□□□□□ -1.1
SED1YDR077W ATG31Q12421 196 aa8.18□□□□□ -1.1
SED1YDR077W TOR1P35169 2470 aa8.18□□□□□ -1.1
SED1YDR077W TPI1P00942 248 aaKnown RBP8.17□□□□□ -1.1
SED1YDR077W VMA8P32610 256 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms