RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C RDL1Q12305 139 aaKnown RBP4.4□□□□□ -1.71
SCM3YDL139C MEK1P24719 497 aaPredicted RBP4.39□□□□□ -1.71
SCM3YDL139C PET18P25362 215 aa4.39□□□□□ -1.71
SCM3YDL139C AHC2P25649 128 aa4.39□□□□□ -1.71
SCM3YDL139C VAM7P32912 316 aa4.39□□□□□ -1.71
SCM3YDL139C SFK1P35735 353 aa4.39□□□□□ -1.71
SCM3YDL139C SHE2P36068 246 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
SCM3YDL139C IMD2P38697 523 aaKnown RBP4.39□□□□□ -1.71
SCM3YDL139C LEU5P38702 357 aa4.39□□□□□ -1.71
SCM3YDL139C REE1P40893 198 aa4.39□□□□□ -1.71
SCM3YDL139C YGL204CP53089 101 aa4.39□□□□□ -1.71
SCM3YDL139C PCP1P53259 346 aa4.39□□□□□ -1.71
SCM3YDL139C OGG1P53397 376 aaPredicted RBP4.39□□□□□ -1.71
SCM3YDL139C INN1P53901 409 aa4.39□□□□□ -1.71
SCM3YDL139C MRPS16Q02608 121 aa4.39□□□□□ -1.71
SCM3YDL139C YDR415CQ04033 374 aaPredicted RBP4.39□□□□□ -1.71
SCM3YDL139C VBA1Q04301 562 aa4.39□□□□□ -1.71
SCM3YDL139C MRX8Q05473 314 aa4.39□□□□□ -1.71
SCM3YDL139C YTH1Q06102 208 aaPredicted RBP4.39□□□□□ -1.71
SCM3YDL139C HSP42Q12329 375 aa4.39□□□□□ -1.71
SCM3YDL139C YNL162W-AQ3E7A8 72 aa4.39□□□□□ -1.71
SCM3YDL139C MTR10Q99189 972 aa4.39□□□□□ -1.71
SCM3YDL139C IPP1P00817 287 aaKnown RBP4.38□□□□□ -1.71
SCM3YDL139C MES1P00958 751 aaKnown RBP4.38□□□□□ -1.71
SCM3YDL139C SEC22P22214 214 aa4.38□□□□□ -1.71
SCM3YDL139C MAK32P23060 363 aa4.38□□□□□ -1.71
SCM3YDL139C STE50P25344 346 aa4.38□□□□□ -1.71
SCM3YDL139C FMT1P32785 401 aa4.38□□□□□ -1.71
SCM3YDL139C SOF1P33750 489 aaKnown RBP4.38□□□□□ -1.71
SCM3YDL139C YBR242WP38331 238 aa4.38□□□□□ -1.71
SCM3YDL139C GEP4P38812 185 aa4.38□□□□□ -1.71
SCM3YDL139C NOP16P40007 231 aaKnown RBP4.38□□□□□ -1.71
SCM3YDL139C GPI14P47088 403 aaKnown RBP4.38□□□□□ -1.71
SCM3YDL139C UBP8P50102 471 aa4.38□□□□□ -1.71
SCM3YDL139C NUP116Q02630 1113 aa4.38□□□□□ -1.71
SCM3YDL139C KAP120Q02932 1032 aa4.38□□□□□ -1.71
SCM3YDL139C SDC1Q03323 175 aa4.38□□□□□ -1.71
SCM3YDL139C NUP53Q03790 475 aa4.38□□□□□ -1.71
SCM3YDL139C RVB1Q03940 463 aaKnown RBP4.38□□□□□ -1.71
SCM3YDL139C DCR2Q05924 578 aa4.38□□□□□ -1.71
SCM3YDL139C MRPL51Q06090 140 aaPredicted RBP4.38□□□□□ -1.71
SCM3YDL139C YOL118CQ08259 102 aa4.38□□□□□ -1.71
SCM3YDL139C FMP16Q12497 93 aa4.38□□□□□ -1.71
SCM3YDL139C HTZ1Q12692 134 aaKnown RBP4.38□□□□□ -1.71
SCM3YDL139C ODC2Q99297 307 aa4.38□□□□□ -1.71
SCM3YDL139C PEP4P07267 405 aaKnown RBP4.37□□□□□ -1.71
SCM3YDL139C SAR1P20606 190 aaKnown RBP4.37□□□□□ -1.71
SCM3YDL139C RNA14P25298 677 aaKnown RBP4.37□□□□□ -1.71
SCM3YDL139C EHD3P28817 500 aa4.37□□□□□ -1.71
SCM3YDL139C GPX1P36014 167 aa4.37□□□□□ -1.71
SCM3YDL139C YEL057CP39983 233 aa4.37□□□□□ -1.71
SCM3YDL139C PHM8P40025 321 aa4.37□□□□□ -1.71
SCM3YDL139C SLZ1P40167 298 aa4.37□□□□□ -1.71
SCM3YDL139C SEC24P40482 926 aaKnown RBP4.37□□□□□ -1.71
SCM3YDL139C CTK2P46962 323 aa4.37□□□□□ -1.71
SCM3YDL139C RNH201P53942 307 aa4.37□□□□□ -1.71
SCM3YDL139C TDA1Q03533 586 aa4.37□□□□□ -1.71
SCM3YDL139C API2Q04413 109 aa4.37□□□□□ -1.71
SCM3YDL139C YDR114CQ04597 100 aa4.37□□□□□ -1.71
SCM3YDL139C YEH1Q07804 573 aa4.37□□□□□ -1.71
SCM3YDL139C IRC19Q07843 230 aa4.37□□□□□ -1.71
SCM3YDL139C YPL199CQ08954 240 aa4.37□□□□□ -1.71
SCM3YDL139C RTC5Q12108 567 aaKnown RBP4.37□□□□□ -1.71
SCM3YDL139C REP2P03872 296 aa4.36□□□□□ -1.71
SCM3YDL139C YHR214C-DP0CX93 97 aa4.36□□□□□ -1.71
SCM3YDL139C HOM3P10869 527 aa4.36□□□□□ -1.71
SCM3YDL139C NHP6BP11633 99 aaKnown RBP4.36□□□□□ -1.71
SCM3YDL139C HNM1P19807 563 aa4.36□□□□□ -1.71
SCM3YDL139C SPT10P35208 640 aa4.36□□□□□ -1.71
SCM3YDL139C SSH1P38353 490 aaKnown RBP4.36□□□□□ -1.71
SCM3YDL139C YHC3P47040 408 aa4.36□□□□□ -1.71
SCM3YDL139C YJR111CP47148 283 aaKnown RBP4.36□□□□□ -1.71
SCM3YDL139C BXI1P48558 297 aa4.36□□□□□ -1.71
SCM3YDL139C YGL260WP53056 76 aa4.36□□□□□ -1.71
SCM3YDL139C ALG9P53868 555 aaKnown RBP4.36□□□□□ -1.71
SCM3YDL139C YLR152CP54072 576 aa4.36□□□□□ -1.71
SCM3YDL139C SPC19Q03954 165 aa4.36□□□□□ -1.71
SCM3YDL139C PLP1Q04004 230 aa4.36□□□□□ -1.71
SCM3YDL139C UTP15Q04305 513 aaKnown RBP4.36□□□□□ -1.71
SCM3YDL139C YLR283WQ05867 314 aa4.36□□□□□ -1.71
SCM3YDL139C YLR031WQ07978 186 aa4.36□□□□□ -1.71
SCM3YDL139C SYC1Q08553 188 aaPredicted RBP4.36□□□□□ -1.71
SCM3YDL139C MCT1Q12283 360 aa4.36□□□□□ -1.71
SCM3YDL139C ATP14Q12349 124 aa4.36□□□□□ -1.71
SCM3YDL139C PAR32Q12515 295 aaKnown RBP4.36□□□□□ -1.71
SCM3YDL139C HUT1Q12520 339 aa4.36□□□□□ -1.71
SCM3YDL139C YJR112W-AQ3E743 109 aa4.36□□□□□ -1.71
SCM3YDL139C ADH7P25377 361 aa4.35□□□□□ -1.71
SCM3YDL139C KRR1P25586 316 aaPredicted RBP4.35□□□□□ -1.71
SCM3YDL139C VMA5P31412 392 aaKnown RBP4.35□□□□□ -1.71
SCM3YDL139C MRPL27P36526 146 aaPredicted RBP4.35□□□□□ -1.71
SCM3YDL139C FRM2P37261 193 aa4.35□□□□□ -1.71
SCM3YDL139C MLH1P38920 769 aa4.35□□□□□ -1.71
SCM3YDL139C YND1P40009 630 aa4.35□□□□□ -1.71
SCM3YDL139C SER3P40054 469 aa4.35□□□□□ -1.71
SCM3YDL139C YFL051CP43552 160 aa4.35□□□□□ -1.71
SCM3YDL139C CCC1P47818 322 aa4.35□□□□□ -1.71
SCM3YDL139C YGL159WP53110 370 aa4.35□□□□□ -1.71
SCM3YDL139C DUO1P53168 247 aaKnown RBP4.35□□□□□ -1.71
SCM3YDL139C AAH1P53909 347 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms