RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W PFS2P42841 465 aaKnown RBP2□□□□□ -2.09
MCD1YDL003W RMD8P43620 662 aa2□□□□□ -2.09
MCD1YDL003W ZAP1P47043 880 aa2□□□□□ -2.09
MCD1YDL003W YJR111CP47148 283 aaKnown RBP2□□□□□ -2.09
MCD1YDL003W IBA57P47158 497 aa2□□□□□ -2.09
MCD1YDL003W BOL2P53082 120 aa2□□□□□ -2.09
MCD1YDL003W THG1P53215 237 aaKnown RBP2□□□□□ -2.09
MCD1YDL003W MEP3P53390 489 aa2□□□□□ -2.09
MCD1YDL003W BOR1P53838 576 aa2□□□□□ -2.09
MCD1YDL003W AAH1P53909 347 aa2□□□□□ -2.09
MCD1YDL003W EFM6P53970 246 aa2□□□□□ -2.09
MCD1YDL003W RHO4Q00246 291 aa2□□□□□ -2.09
MCD1YDL003W YVH1Q02256 364 aaKnown RBP2□□□□□ -2.09
MCD1YDL003W CTF19Q02732 369 aa2□□□□□ -2.09
MCD1YDL003W CGI121Q03705 181 aaKnown RBP2□□□□□ -2.09
MCD1YDL003W ARA2Q04212 335 aa2□□□□□ -2.09
MCD1YDL003W SHH3Q04487 196 aa2□□□□□ -2.09
MCD1YDL003W AVO2Q04749 426 aa2□□□□□ -2.09
MCD1YDL003W CTS2Q06350 511 aa2□□□□□ -2.09
MCD1YDL003W SWC7Q06707 132 aa2□□□□□ -2.09
MCD1YDL003W MCH1Q07376 486 aa2□□□□□ -2.09
MCD1YDL003W HEM25Q07534 307 aa2□□□□□ -2.09
MCD1YDL003W CSI2Q08054 341 aa2□□□□□ -2.09
MCD1YDL003W PER33Q12144 273 aa2□□□□□ -2.09
MCD1YDL003W TIR4Q12218 487 aaPredicted RBP2□□□□□ -2.09
MCD1YDL003W ATG5Q12380 294 aa2□□□□□ -2.09
MCD1YDL003W PCL9Q12477 304 aa2□□□□□ -2.09
MCD1YDL003W SNF8Q12483 233 aa2□□□□□ -2.09
MCD1YDL003W YJR112W-AQ3E743 109 aa2□□□□□ -2.09
MCD1YDL003W IZH4Q99393 312 aa2□□□□□ -2.09
MCD1YDL003W COX2P00410 251 aa1.99□□□□□ -2.09
MCD1YDL003W HIS1P00498 297 aaKnown RBP1.99□□□□□ -2.09
MCD1YDL003W GDH1P07262 454 aaKnown RBP1.99□□□□□ -2.09
MCD1YDL003W RIP1P08067 215 aa1.99□□□□□ -2.09
MCD1YDL003W SCH9P11792 824 aaKnown RBP1.99□□□□□ -2.09
MCD1YDL003W SST2P11972 698 aaKnown RBP1.99□□□□□ -2.09
MCD1YDL003W SAM2P19358 384 aaKnown RBP1.99□□□□□ -2.09
MCD1YDL003W DAL82P21705 255 aa1.99□□□□□ -2.09
MCD1YDL003W POP5P28005 173 aa1.99□□□□□ -2.09
MCD1YDL003W FMT1P32785 401 aa1.99□□□□□ -2.09
MCD1YDL003W MSN2P33748 704 aa1.99□□□□□ -2.09
MCD1YDL003W TVP38P36164 337 aa1.99□□□□□ -2.09
MCD1YDL003W YCR087C-AP37263 153 aa1.99□□□□□ -2.09
MCD1YDL003W MRPS9P38120 278 aa1.99□□□□□ -2.09
MCD1YDL003W MIX23P38162 196 aa1.99□□□□□ -2.09
MCD1YDL003W SHE1P38200 338 aa1.99□□□□□ -2.09
MCD1YDL003W HAT2P39984 401 aa1.99□□□□□ -2.09
MCD1YDL003W AVT7P40501 490 aa1.99□□□□□ -2.09
MCD1YDL003W FIS1P40515 155 aa1.99□□□□□ -2.09
MCD1YDL003W CAT5P41735 233 aa1.99□□□□□ -2.09
MCD1YDL003W OST3P48439 350 aa1.99□□□□□ -2.09
MCD1YDL003W MDM34P53083 459 aa1.99□□□□□ -2.09
MCD1YDL003W PNC1P53184 216 aaKnown RBP1.99□□□□□ -2.09
MCD1YDL003W DYN2Q02647 92 aa1.99□□□□□ -2.09
MCD1YDL003W STD1Q02794 444 aa1.99□□□□□ -2.09
MCD1YDL003W YDR391CQ04170 232 aa1.99□□□□□ -2.09
MCD1YDL003W UTP15Q04305 513 aaKnown RBP1.99□□□□□ -2.09
MCD1YDL003W SEC13Q04491 297 aaKnown RBP1.99□□□□□ -2.09
MCD1YDL003W PIN3Q06449 215 aa1.99□□□□□ -2.09
MCD1YDL003W SHS1Q07657 551 aa1.99□□□□□ -2.09
MCD1YDL003W GPM2Q12008 311 aa1.99□□□□□ -2.09
MCD1YDL003W YPR027CQ12079 277 aa1.99□□□□□ -2.09
MCD1YDL003W ERV2Q12284 196 aa1.99□□□□□ -2.09
MCD1YDL003W JLP1Q12358 412 aa1.99□□□□□ -2.09
MCD1YDL003W HUT1Q12520 339 aa1.99□□□□□ -2.09
MCD1YDL003W YLR146W-AQ2V2P1 62 aa1.99□□□□□ -2.09
MCD1YDL003W Q0010Q9ZZX9 128 aa1.99□□□□□ -2.09
MCD1YDL003W COX3P00420 269 aa1.98□□□□□ -2.09
MCD1YDL003W TPI1P00942 248 aaKnown RBP1.98□□□□□ -2.09
MCD1YDL003W RPS25BP0C0T4 108 aaKnown RBP1.98□□□□□ -2.09
MCD1YDL003W PAU19P0CE85 124 aa1.98□□□□□ -2.09
MCD1YDL003W PAU21P0CE86 164 aa1.98□□□□□ -2.09
MCD1YDL003W PAU22P0CE87 164 aa1.98□□□□□ -2.09
MCD1YDL003W DDI2P0CH63 225 aa1.98□□□□□ -2.09
MCD1YDL003W DDI3P0CH64 225 aa1.98□□□□□ -2.09
MCD1YDL003W ASP3-2P0CX77 362 aa1.98□□□□□ -2.09
MCD1YDL003W ASP3-3P0CX78 362 aa1.98□□□□□ -2.09
MCD1YDL003W ASP3-4P0CX79 362 aa1.98□□□□□ -2.09
MCD1YDL003W ASP3-1P0CZ17 362 aa1.98□□□□□ -2.09
MCD1YDL003W HSP26P15992 214 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
MCD1YDL003W SEC22P22214 214 aa1.98□□□□□ -2.09
MCD1YDL003W PRE8P23639 250 aa1.98□□□□□ -2.09
MCD1YDL003W PUT3P25502 979 aaPredicted RBP1.98□□□□□ -2.09
MCD1YDL003W PAU3P25610 124 aa1.98□□□□□ -2.09
MCD1YDL003W TIP1P27654 210 aaPredicted RBP1.98□□□□□ -2.09
MCD1YDL003W POT1P27796 417 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
MCD1YDL003W PEX4P29340 183 aa1.98□□□□□ -2.09
MCD1YDL003W NTF2P33331 125 aaKnown RBP1.98□□□□□ -2.09
MCD1YDL003W PRP18P33411 251 aaPredicted RBP1.98□□□□□ -2.09
MCD1YDL003W YUH1P35127 236 aa1.98□□□□□ -2.09
MCD1YDL003W CBP4P37267 147 aa1.98□□□□□ -2.09
MCD1YDL003W URA8P38627 578 aaPredicted RBP1.98□□□□□ -2.09
MCD1YDL003W YHL044WP38727 235 aa1.98□□□□□ -2.09
MCD1YDL003W PUG1P40100 303 aa1.98□□□□□ -2.09
MCD1YDL003W SSU1P41930 458 aa1.98□□□□□ -2.09
MCD1YDL003W SPG5P42933 373 aa1.98□□□□□ -2.09
MCD1YDL003W YHC3P47040 408 aa1.98□□□□□ -2.09
MCD1YDL003W UBX6P47049 396 aa1.98□□□□□ -2.09
MCD1YDL003W YGL262WP53054 175 aa1.98□□□□□ -2.09
MCD1YDL003W PEX31P53203 462 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms