RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	BIT61	P47041	543 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	MUP1	P50276	574 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	EST3	Q03096	181 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	TDA6	Q06466	467 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	GPM2	Q12008	311 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	PUT3	P25502	979 aa	Predicted RBP	4.18	□□□□□ -1.74
VHC1	YBR235W	POP5	P28005	173 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	YJL068C	P40363	299 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	COA1	P40452	197 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	LST7	P53237	242 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	YPR174C	Q06616	221 aa	Predicted RBP	4.18	□□□□□ -1.74
VHC1	YBR235W	MCA1	Q08601	432 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	ALG6	Q12001	544 aa	Known RBP	4.18	□□□□□ -1.74
VHC1	YBR235W	FRE8	Q12209	686 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	NDJ1	Q12366	352 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	ZPS1	Q12512	249 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	HUT1	Q12520	339 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	SCS22	Q6Q595	175 aa		4.18	□□□□□ -1.74
VHC1	YBR235W	MCK1	P21965	375 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	SLY41	P22215	453 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	MAK32	P23060	363 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	YCR023C	P25351	611 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	THI80	P35202	319 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	SMM1	P53720	384 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	YNL034W	P53963	612 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	YMR252C	Q04814	134 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	SCW10	Q04951	389 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	YLR446W	Q06204	433 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	PIN3	Q06449	215 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	AAD4	Q07747	329 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	USB1	Q12208	290 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	PRS5	Q12265	496 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	GEP5	Q12393	293 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	TIR1	P10863	254 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	OAC1	P32332	324 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	DCG1	P32460	244 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	SEC17	P32602	292 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	MDL1	P33310	695 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	SKN1	P33336	771 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	DRE2	P36152	348 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	ADH5	P38113	351 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	THI2	P38141	450 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	UBS1	P38290	277 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	YPT35	P38815	214 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	ISC1	P40015	477 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	RSM10	Q03201	203 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	LEA1	Q08963	238 aa	Predicted RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	ISD11	Q6Q560	94 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	HKR1	P41809	1802 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	ADH1	P00330	348 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	RAS1	P01119	309 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	YCR090C	P25654	182 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	YCR099C	P25657	155 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	AIM26	P32858	118 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	SMD3	P43321	101 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	ERJ5	P43613	295 aa	Predicted RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	IKS1	P47042	667 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	MTO1	P53070	669 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	BIO5	P53744	561 aa	Known RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	CDC55	Q00362	526 aa		4.17	□□□□□ -1.74
VHC1	YBR235W	MTQ2	Q03920	221 aa	Predicted RBP	4.17	□□□□□ -1.74
VHC1	YBR235W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
VHC1	YBR235W	MBF1	O14467	151 aa	Known RBP	4.16	□□□□□ -1.74
VHC1	YBR235W	CYT1	P07143	309 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	DCW1	P36091	449 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	SHE1	P38200	338 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	NDT80	P38830	627 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	PFD1	P46988	109 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	NCE103	P53615	221 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	YMR210W	Q03649	449 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	DIC1	Q06143	298 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	GAS5	Q08193	484 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	TRM13	Q12383	476 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
VHC1	YBR235W	COX1	P00401	534 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	ILV5	P06168	395 aa	Known RBP	4.16	□□□□□ -1.74
VHC1	YBR235W	ANB1	P19211	157 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	PBN1	P25580	416 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	ALK2	P32789	676 aa	Predicted RBP	4.16	□□□□□ -1.74
VHC1	YBR235W	NNK1	P36003	928 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	DER1	P38307	211 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	YIL165C	P40446	119 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	YIR007W	P40566	764 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	AVT1	P47082	602 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	MSB3	P48566	633 aa	Predicted RBP	4.16	□□□□□ -1.74
VHC1	YBR235W	TAM41	P53230	385 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	NMA1	Q06178	401 aa	Known RBP	4.16	□□□□□ -1.74
VHC1	YBR235W	YOR015W	Q12169	119 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	YLL056C	Q12177	298 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	UBR2	Q07963	1872 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	SOD2	P00447	233 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	ATP10	P18496	279 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	TKL1	P23254	680 aa	Known RBP	4.16	□□□□□ -1.74
VHC1	YBR235W	MF(ALPHA)2	P32435	120 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	OXA1	P39952	402 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	YIL089W	P40500	205 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	FIS1	P40515	155 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	HRI1	Q05905	244 aa	Known RBP	4.16	□□□□□ -1.74
VHC1	YBR235W	BNA5	Q05979	453 aa		4.16	□□□□□ -1.74
VHC1	YBR235W	YLR346C	Q06139	101 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms