RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C EMP46Q12396 444 aa1.56□□□□□ -2.16
RPB5YBR154C YPL247CQ12523 523 aa1.56□□□□□ -2.16
RPB5YBR154C PPH21P23594 369 aa1.55□□□□□ -2.16
RPB5YBR154C TOM40P23644 387 aaKnown RBP1.55□□□□□ -2.16
RPB5YBR154C PRX1P34227 261 aaKnown RBP1.55□□□□□ -2.16
RPB5YBR154C YER189WP40104 122 aa1.55□□□□□ -2.16
RPB5YBR154C YNL194CP40169 301 aa1.55□□□□□ -2.16
RPB5YBR154C RFC4P40339 323 aaKnown RBP1.55□□□□□ -2.16
RPB5YBR154C HAM1P47119 197 aaKnown RBP1.55□□□□□ -2.16
RPB5YBR154C CWC23P52868 283 aaPredicted RBP1.55□□□□□ -2.16
RPB5YBR154C MGA1P53050 456 aa1.55□□□□□ -2.16
RPB5YBR154C CUS2P53830 285 aaPredicted RBP1.55□□□□□ -2.16
RPB5YBR154C GIM3P53900 129 aa1.55□□□□□ -2.16
RPB5YBR154C FCF1Q05498 189 aaPredicted RBP1.55□□□□□ -2.16
RPB5YBR154C ATG38Q05789 226 aaKnown RBP1.55□□□□□ -2.16
RPB5YBR154C SLD7Q08457 257 aa1.55□□□□□ -2.16
RPB5YBR154C GET4Q12125 312 aa1.55□□□□□ -2.16
RPB5YBR154C YPR011CQ12251 326 aa1.55□□□□□ -2.16
RPB5YBR154C TPO4Q12256 659 aa1.55□□□□□ -2.16
RPB5YBR154C PST1Q12355 444 aa1.55□□□□□ -2.16
RPB5YBR154C NOT5Q12514 560 aaPredicted RBP1.55□□□□□ -2.16
RPB5YBR154C YDR157WA0A023PZE8 133 aa1.54□□□□□ -2.16
RPB5YBR154C YLR462WO13556 202 aa1.54□□□□□ -2.16
RPB5YBR154C RPL28P02406 149 aaKnown RBP1.54□□□□□ -2.16
RPB5YBR154C URA6P15700 204 aa1.54□□□□□ -2.16
RPB5YBR154C IDH1P28834 360 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
RPB5YBR154C RNP1P32385 249 aa1.54□□□□□ -2.16
RPB5YBR154C YEL075CP39972 122 aa1.54□□□□□ -2.16
RPB5YBR154C NUP57P48837 541 aa1.54□□□□□ -2.16
RPB5YBR154C BRR6P53062 197 aa1.54□□□□□ -2.16
RPB5YBR154C TOS8P53147 276 aa1.54□□□□□ -2.16
RPB5YBR154C FYV6P53913 173 aa1.54□□□□□ -2.16
RPB5YBR154C YDR114CQ04597 100 aa1.54□□□□□ -2.16
RPB5YBR154C HEM25Q07534 307 aa1.54□□□□□ -2.16
RPB5YBR154C JLP1Q12358 412 aa1.54□□□□□ -2.16
RPB5YBR154C MRX4Q12467 430 aa1.54□□□□□ -2.16
RPB5YBR154C YPL229WQ99395 206 aa1.54□□□□□ -2.16
RPB5YBR154C SIR4P11978 1358 aa1.54□□□□□ -2.16
RPB5YBR154C HIS3P06633 220 aa1.53□□□□□ -2.16
RPB5YBR154C SWI1P09547 1314 aa1.53□□□□□ -2.16
RPB5YBR154C SEC22P22214 214 aa1.53□□□□□ -2.16
RPB5YBR154C CHD1P32657 1468 aa1.53□□□□□ -2.16
RPB5YBR154C TAF14P35189 244 aa1.53□□□□□ -2.16
RPB5YBR154C SAC3P46674 1301 aa1.53□□□□□ -2.16
RPB5YBR154C ADO1P47143 340 aaKnown RBP1.53□□□□□ -2.16
RPB5YBR154C ILM1P47155 203 aa1.53□□□□□ -2.16
RPB5YBR154C MDM34P53083 459 aa1.53□□□□□ -2.16
RPB5YBR154C ALG13P53178 202 aa1.53□□□□□ -2.16
RPB5YBR154C FAR8Q05040 523 aa1.53□□□□□ -2.16
RPB5YBR154C YPR172WQ06608 200 aa1.53□□□□□ -2.16
RPB5YBR154C YRA1Q12159 226 aaKnown RBP1.53□□□□□ -2.16
RPB5YBR154C GEP5Q12393 293 aa1.53□□□□□ -2.16
RPB5YBR154C IPP1P00817 287 aaKnown RBP1.52□□□□□ -2.17
RPB5YBR154C HTB1P02293 131 aaKnown RBP1.52□□□□□ -2.17
RPB5YBR154C HTB2P02294 131 aa1.52□□□□□ -2.17
RPB5YBR154C SGA1P08019 549 aa1.52□□□□□ -2.17
RPB5YBR154C MET2P08465 486 aa1.52□□□□□ -2.17
RPB5YBR154C MATALPHA2P0CY08 210 aa1.52□□□□□ -2.17
RPB5YBR154C HMLALPHA2P0CY09 210 aa1.52□□□□□ -2.17
RPB5YBR154C CBF1P17106 351 aa1.52□□□□□ -2.17
RPB5YBR154C YPK2P18961 677 aa1.52□□□□□ -2.17
RPB5YBR154C RFA3P26755 122 aaKnown RBP1.52□□□□□ -2.17
RPB5YBR154C ERG24P32462 438 aaKnown RBP1.52□□□□□ -2.17
RPB5YBR154C MGM101P32787 269 aaKnown RBP1.52□□□□□ -2.17
RPB5YBR154C SRY1P36007 326 aa1.52□□□□□ -2.17
RPB5YBR154C COS8P38723 381 aa1.52□□□□□ -2.17
RPB5YBR154C IKI1P38874 309 aa1.52□□□□□ -2.17
RPB5YBR154C PEX17P40155 199 aa1.52□□□□□ -2.17
RPB5YBR154C IRC18P47056 224 aa1.52□□□□□ -2.17
RPB5YBR154C RMR1P53060 241 aa1.52□□□□□ -2.17
RPB5YBR154C YGL159WP53110 370 aa1.52□□□□□ -2.17
RPB5YBR154C GET1P53192 235 aa1.52□□□□□ -2.17
RPB5YBR154C TLG1Q03322 224 aa1.52□□□□□ -2.17
RPB5YBR154C YML108WQ03759 105 aa1.52□□□□□ -2.17
RPB5YBR154C INM2Q05533 292 aa1.52□□□□□ -2.17
RPB5YBR154C YLR179CQ06252 201 aaKnown RBP1.52□□□□□ -2.17
RPB5YBR154C MSA1Q08471 629 aa1.52□□□□□ -2.17
RPB5YBR154C ABP140Q08641 628 aaKnown RBP1.52□□□□□ -2.17
RPB5YBR154C CLP1Q08685 445 aaPredicted RBP1.52□□□□□ -2.17
RPB5YBR154C AGC1Q12482 902 aa1.52□□□□□ -2.17
RPB5YBR154C HTL1Q9URQ5 78 aa1.52□□□□□ -2.17
RPB5YBR154C COX5AP00424 153 aa1.51□□□□□ -2.17
RPB5YBR154C CDC28P00546 298 aaKnown RBP1.51□□□□□ -2.17
RPB5YBR154C RAD10P06838 210 aa1.51□□□□□ -2.17
RPB5YBR154C RPL27AP0C2H6 136 aaKnown RBP1.51□□□□□ -2.17
RPB5YBR154C RPL27BP0C2H7 136 aaKnown RBP1.51□□□□□ -2.17
RPB5YBR154C RCN1P36054 211 aa1.51□□□□□ -2.17
RPB5YBR154C YRB2P40517 327 aa1.51□□□□□ -2.17
RPB5YBR154C CAT5P41735 233 aa1.51□□□□□ -2.17
RPB5YBR154C OST2P46964 130 aa1.51□□□□□ -2.17
RPB5YBR154C SYF2P53277 215 aaPredicted RBP1.51□□□□□ -2.17
RPB5YBR154C GTR2P53290 341 aa1.51□□□□□ -2.17
RPB5YBR154C DID2P69771 204 aa1.51□□□□□ -2.17
RPB5YBR154C SNZ1Q03148 297 aa1.51□□□□□ -2.17
RPB5YBR154C YLR030WQ07967 263 aa1.51□□□□□ -2.17
RPB5YBR154C YOR268CQ08734 132 aa1.51□□□□□ -2.17
RPB5YBR154C YPL257WQ08974 193 aa1.51□□□□□ -2.17
RPB5YBR154C LSO2Q3E772 92 aaKnown RBP1.51□□□□□ -2.17
RPB5YBR154C DRS2P39524 1355 aa1.5□□□□□ -2.17
RPB5YBR154C TUS1Q06412 1307 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms