RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 USTQ9Y2C2 406 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 USP20Q9Y2K6 914 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 TCHHQ07283 1943 aa5.25□□□□□ -1.57
CLK3-219ENST00000567805 DOCK8Q8NF50 2099 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 TECTAO75443 2155 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 VPS13AQ96RL7 3174 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 SFI1A8K8P3 1242 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 C2CD4DB7Z1M9 353 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 K7ELQ4 463 aaPredicted RBP5.24□□□□□ -1.57
CLK3-219ENST00000567805 ABLIM1O14639 778 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 TGM5O43548 720 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 TRAPPC3O43617 180 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 TOM1L1O75674 476 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 PAPLNO95428 1278 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 BRD1O95696 1058 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 WEE2P0C1S8 567 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 MAPTP10636 758 aaKnown RBP5.24□□□□□ -1.57
CLK3-219ENST00000567805 PLCG1P19174 1290 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 SYT1P21579 422 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 SP100P23497 879 aaPredicted RBP5.24□□□□□ -1.57
CLK3-219ENST00000567805 ABCD1P33897 745 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 CLCNKBP51801 687 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 ZNF131P52739 623 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 NCKAP1LP55160 1127 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 ZXDAP98168 799 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 GRIN1Q05586 938 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 SIGLEC14Q08ET2 396 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 NOLC1Q14978 699 aaKnown RBP eCLIP5.24□□□□□ -1.57
CLK3-219ENST00000567805 KARSQ15046 597 aaKnown RBP5.24□□□□□ -1.57
CLK3-219ENST00000567805 PTPN21Q16825 1174 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 UPP1Q16831 310 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 XKR4Q5GH76 650 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 FAM171A1Q5VUB5 890 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 KANK3Q6NY19 840 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 ALKAL1Q6UXT8 129 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 ZPBP2Q6X784 338 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 TRIM67Q6ZTA4 783 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 BMP8AQ7Z5Y6 402 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 ZBTB33Q86T24 672 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 UBALD2Q8IYN6 164 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 ZDHHC14Q8IZN3 488 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 CEP120Q8N960 986 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 TDRD5Q8NAT2 981 aaKnown RBP5.24□□□□□ -1.57
CLK3-219ENST00000567805 RASSF8Q8NHQ8 419 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 HASPINQ8TF76 798 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 RIN2Q8WYP3 895 aaPredicted RBP5.24□□□□□ -1.57
CLK3-219ENST00000567805 PIK3R5Q8WYR1 880 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 RABGGTAQ92696 567 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 RAD54LQ92698 747 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 ACSF2Q96CM8 615 aaPredicted RBP5.24□□□□□ -1.57
CLK3-219ENST00000567805 DDX27Q96GQ7 796 aaKnown RBP5.24□□□□□ -1.57
CLK3-219ENST00000567805 B3GALT6Q96L58 329 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 MFSD14AQ96MC6 490 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 ACAP3Q96P50 834 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 PLIN2Q99541 437 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 REEP2Q9BRK0 252 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 TCHPQ9BT92 498 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 TTPALQ9BTX7 342 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 TARS2Q9BW92 718 aaKnown RBP5.24□□□□□ -1.57
CLK3-219ENST00000567805 KCNH6Q9H252 994 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 CXCL16Q9H2A7 254 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 PLEKHA4Q9H4M7 779 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 ZSCAN16Q9H4T2 348 aaPredicted RBP5.24□□□□□ -1.57
CLK3-219ENST00000567805 PARVGQ9HBI0 331 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 BLOC1S4Q9NUP1 217 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 SLC38A7Q9NVC3 462 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 CNTN3Q9P232 1028 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 ANKFY1Q9P2R3 1169 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 CDH22Q9UJ99 828 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 SORCS3Q9UPU3 1222 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 CLIC4Q9Y696 253 aa5.24□□□□□ -1.57
CLK3-219ENST00000567805 TSC2P49815 1807 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 DOCK6Q96HP0 2047 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 NPHP3-ACAD11A0A0J9YXS1 232 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 SMIM28A0A1B0GU29 152 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 CCDC195A0A1B0GUA6 201 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 TMEM221A6NGB7 291 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 K7ENM7 598 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 M0R296 226 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 CLDN3O15551 220 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 STX6O43752 255 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 TBCAO75347 108 aaKnown RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 RFPL2O75678 378 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 B3GAT3O94766 335 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 FAM13AO94988 1023 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 KRT18P05783 430 aaKnown RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 HARSP12081 509 aaKnown RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 KCNE1P15382 129 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 RPL17P18621 184 aaKnown RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 RPL9P32969 192 aaKnown RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 DDIT3P35638 169 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 PLA2G5P39877 138 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 TXLNAP40222 546 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 MATR3P43243 847 aaKnown RBP eCLIP5.23□□□□□ -1.57
CLK3-219ENST00000567805 OSTNP61366 133 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 SOX4Q06945 474 aaPredicted RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 MCL1Q07820 350 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 RESTQ13127 1097 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 MTMR3Q13615 1198 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 DHX8Q14562 1220 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms