RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 SNX27Q96L92 541 aa8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 ERGIC2Q96RQ1 377 aa8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 CRACR2AQ9BSW2 395 aa8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 TMEM117Q9H0C3 514 aa8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 ELAC1Q9H777 363 aaKnown RBP8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 RSAD1Q9HA92 442 aa8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 CNTN3Q9P232 1028 aa8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 LRFN2Q9ULH4 789 aa8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 DERAQ9Y315 318 aa8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 PCDHB7Q9Y5E2 793 aa8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.68□□□□□ -1.02
MRPL40P1-201ENST00000542687 SMIM28A0A1B0GU29 152 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 RBAK-RBAKDNI3L0D1 243 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 MEFVO15553 781 aaPredicted RBP8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 EFCAB14O75071 495 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 C4BPAP04003 597 aaKnown RBP8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 NFICP08651 508 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 TPM1P09493 284 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 KCNE1P15382 129 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 PON1P27169 355 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 PBX1P40424 430 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 KCNMA1Q12791 1236 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 PPIGQ13427 754 aaKnown RBP eCLIP8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 PTPN21Q16825 1174 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 ZACNQ401N2 412 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 XKR4Q5GH76 650 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 WDR44Q5JSH3 913 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 GLB1LQ6UWU2 654 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 AGMOQ6ZNB7 445 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 C15orf39Q6ZRI6 1047 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 TRAPPC11Q7Z392 1133 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 TMC6Q7Z403 805 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 ZNF598Q86UK7 904 aaKnown RBP8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 PPFIBP1Q86W92 1011 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 CCDC150Q8NCX0 1101 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 FBXL13Q8NEE6 735 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 BEST2Q8NFU1 509 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 LINC01599Q8WXQ3 324 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 BADQ92934 168 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 RPS6KC1Q96S38 1066 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 GAD1Q99259 594 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 LBHD1Q9BQE6 289 aaPredicted RBP8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 NUP58Q9BVL2 599 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 LSM14BQ9BX40 385 aaKnown RBP8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 MTMR12Q9C0I1 747 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 INTS2Q9H0H0 1204 aaKnown RBP8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 IL23AQ9NPF7 189 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 SLC38A7Q9NVC3 462 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 RAB20Q9NX57 234 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 TMEM161AQ9NX61 479 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 DPP3Q9NY33 737 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 GCNT4Q9P109 453 aa8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 UBQLN1Q9UMX0 589 aaKnown RBP8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.67□□□□□ -1.02
MRPL40P1-201ENST00000542687 SZT2Q5T011 3432 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 PTPRJQ12913 1337 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 ITIH6Q6UXX5 1313 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 ARL5CA6NH57 179 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 MEIS3P2A8K0S8 358 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 HOXA2O43364 376 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 OFD1O75665 1012 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 CLSTN1O94985 981 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 HLA-DRAP01903 254 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 FGBP02675 491 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 THP07101 528 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 KRT19P08727 400 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 ACRP10323 421 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 ATF7P17544 494 aaPredicted RBP8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 TRIM21P19474 475 aaKnown RBP8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 SLC9A1P19634 815 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 CYP3A5P20815 502 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 MLH1P40692 756 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 PIK3CAP42336 1068 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 KLK7P49862 253 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 RBP5P82980 135 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 FPGSQ05932 587 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 CCDC173Q0VFZ6 552 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 NCOA4Q13772 614 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 ZBTB6Q15916 424 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 TCTN1Q2MV58 587 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 SGSM1Q2NKQ1 1148 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 EPC2Q52LR7 807 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 GLRA4Q5JXX5 417 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 KLHDC7AQ5VTJ3 777 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 TDRD10Q5VZ19 366 aaKnown RBP8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 EFCAB13Q8IY85 973 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 ABI1Q8IZP0 508 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 SPC24Q8NBT2 197 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 NEK11Q8NG66 645 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 URGCPQ8TCY9 931 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 TAS1R2Q8TE23 839 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 CPLX3Q8WVH0 158 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 IQCDQ96DY2 449 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 FAM84AQ96KN4 292 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 ZFP42Q96MM3 310 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 ZMAT2Q96NC0 199 aaKnown RBP8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 IMPG2Q9BZV3 1241 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 PLCB1Q9NQ66 1216 aa8.66□□□□□ -1.02
MRPL40P1-201ENST00000542687 FAM207AQ9NSI2 230 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms