RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 MAPTP10636 758 aaKnown RBP12.19□□□□□ -0.46
NR1H3-230ENST00000527949 KCNE1P15382 129 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 YARSP54577 528 aaKnown RBP12.19□□□□□ -0.46
NR1H3-230ENST00000527949 NCKAP1LP55160 1127 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 PTPAQ15257 358 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 SF3A1Q15459 793 aaKnown RBP12.19□□□□□ -0.46
NR1H3-230ENST00000527949 KYAT1Q16773 422 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 ARSHQ5FYA8 562 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 LILRA6Q6PI73 481 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 MPZL3Q6UWV2 235 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 RTL10Q7L3V2 364 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 TAS1R1Q7RTX1 841 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 SNX21Q969T3 373 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
NR1H3-230ENST00000527949 TSPAN18Q96SJ8 248 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 SLC38A7Q9NVC3 462 aa12.19□□□□□ -0.46
NR1H3-230ENST00000527949 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
NR1H3-230ENST00000527949 SLC16A4O15374 487 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 PI15O43692 258 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 PIGRP01833 764 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 POU2F2P09086 479 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 SYT1P21579 422 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 MCL1Q07820 350 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 STRN3Q13033 797 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 RESTQ13127 1097 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 ZNF568Q3ZCX4 644 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 PHLDB3Q6NSJ2 640 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 DCLRE1AQ6PJP8 1040 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.18□□□□□ -0.46
NR1H3-230ENST00000527949 GPR161Q8N6U8 529 aaKnown RBP12.18□□□□□ -0.46
NR1H3-230ENST00000527949 RUBCNQ92622 972 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 HINFPQ9BQA5 517 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 TTPALQ9BTX7 342 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 TARS2Q9BW92 718 aaKnown RBP12.18□□□□□ -0.46
NR1H3-230ENST00000527949 ZSCAN16Q9H4T2 348 aaPredicted RBP12.18□□□□□ -0.46
NR1H3-230ENST00000527949 POLD4Q9HCU8 107 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 ZDHHC7Q9NXF8 308 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 CNTN3Q9P232 1028 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 EPS15L1Q9UBC2 864 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 STK17AQ9UEE5 414 aa12.18□□□□□ -0.46
NR1H3-230ENST00000527949 SRPRBQ9Y5M8 271 aaKnown RBP12.18□□□□□ -0.46
NR1H3-230ENST00000527949 VWA8A3KMH1 1905 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 SPTBN4Q9H254 2564 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 SMIM28A0A1B0GU29 152 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 VPS37CA5D8V6 355 aaPredicted RBP12.17□□□□□ -0.46
NR1H3-230ENST00000527949 F8W810 466 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 TRAPPC3O43617 180 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 KIF4AO95239 1232 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 SSBP05455 408 aaKnown RBP eCLIP12.17□□□□□ -0.46
NR1H3-230ENST00000527949 SRFP11831 508 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 LIG1P18858 919 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 FGFR3P22607 806 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 HOXA9P31269 272 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 RPL9P32969 192 aaKnown RBP12.17□□□□□ -0.46
NR1H3-230ENST00000527949 NOLC1Q14978 699 aaKnown RBP eCLIP12.17□□□□□ -0.46
NR1H3-230ENST00000527949 UPP1Q16831 310 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 RIN2Q8WYP3 895 aaPredicted RBP12.17□□□□□ -0.46
NR1H3-230ENST00000527949 RAD54LQ92698 747 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 RMDN1Q96DB5 314 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 ACAP3Q96P50 834 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 PAAF1Q9BRP4 392 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 ST6GALNAC4Q9H4F1 302 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 PLEKHA5Q9HAU0 1116 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 PARVGQ9HBI0 331 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 WDR6Q9NNW5 1121 aaKnown RBP12.17□□□□□ -0.46
NR1H3-230ENST00000527949 MAN1C1Q9NR34 630 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.17□□□□□ -0.46
NR1H3-230ENST00000527949 USP20Q9Y2K6 914 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 GDAQ9Y2T3 454 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 SIT1Q9Y3P8 196 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 C2orf16Q68DN1 1984 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 RIF1Q5UIP0 2472 aaKnown RBP12.17□□□□□ -0.46
NR1H3-230ENST00000527949 DOCK8Q8NF50 2099 aa12.17□□□□□ -0.46
NR1H3-230ENST00000527949 PDCD11Q14690 1871 aaKnown RBP12.17□□□□□ -0.46
NR1H3-230ENST00000527949 CASTOR2A6NHX0 329 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 ADRB2P07550 413 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 HNRNPA1P09651 372 aaKnown RBP eCLIP12.16□□□□□ -0.46
NR1H3-230ENST00000527949 PLCG1P19174 1290 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 GBP2P32456 591 aaPredicted RBP12.16□□□□□ -0.46
NR1H3-230ENST00000527949 DDIT3P35638 169 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 POU5F1Q01860 360 aaKnown RBP12.16□□□□□ -0.46
NR1H3-230ENST00000527949 ZRSR1Q15695 479 aaKnown RBP12.16□□□□□ -0.46
NR1H3-230ENST00000527949 RTP2Q5QGT7 225 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 HAUS6Q7Z4H7 955 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 GPBP1Q86WP2 473 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 KIAA2013Q8IYS2 634 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 LNX1Q8TBB1 728 aaPredicted RBP12.16□□□□□ -0.46
NR1H3-230ENST00000527949 LARP4BQ92615 738 aaKnown RBP12.16□□□□□ -0.46
NR1H3-230ENST00000527949 SHDQ96IW2 340 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 REEP2Q9BRK0 252 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 TCHPQ9BT92 498 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 FBXO2Q9UK22 296 aaPredicted RBP12.16□□□□□ -0.46
NR1H3-230ENST00000527949 FBXW11Q9UKB1 542 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 MTMR6Q9Y217 621 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 BACE2Q9Y5Z0 518 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 ZFP37Q9Y6Q3 630 aaPredicted RBP12.16□□□□□ -0.46
NR1H3-230ENST00000527949 FAM186AA6NE01 2351 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 CACNA1AO00555 2505 aa12.16□□□□□ -0.46
NR1H3-230ENST00000527949 SFI1A8K8P3 1242 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms