RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TFAMQ00059 246 aaKnown RBP10.72□□□□□ -0.69
VPS13B-212ENST00000524330 CUL2Q13617 745 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 CLUL1Q15846 466 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 GNASQ5JWF2 1037 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 CCDC181Q5TID7 509 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 TDRD10Q5VZ19 366 aaKnown RBP10.72□□□□□ -0.69
VPS13B-212ENST00000524330 PAPD7Q5XG87 772 aaKnown RBP10.72□□□□□ -0.69
VPS13B-212ENST00000524330 TRAPPC11Q7Z392 1133 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 RPUSD2Q8IZ73 545 aaKnown RBP10.72□□□□□ -0.69
VPS13B-212ENST00000524330 PCSK9Q8NBP7 692 aaKnown RBP10.72□□□□□ -0.69
VPS13B-212ENST00000524330 ZSWIM2Q8NEG5 633 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 HELQQ8TDG4 1101 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 SEMA4DQ92854 862 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 SELENOOQ9BVL4 669 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 CARD6Q9BX69 1037 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 TRIM6Q9C030 488 aaPredicted RBP10.72□□□□□ -0.69
VPS13B-212ENST00000524330 LACRTQ9GZZ8 138 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 FAM49AQ9H0Q0 323 aaPredicted RBP10.72□□□□□ -0.69
VPS13B-212ENST00000524330 UPF3AQ9H1J1 476 aaKnown RBP10.72□□□□□ -0.69
VPS13B-212ENST00000524330 PLEKHA5Q9HAU0 1116 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 IFT122Q9HBG6 1241 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 TOPORSQ9NS56 1045 aaPredicted RBP10.72□□□□□ -0.69
VPS13B-212ENST00000524330 DERAQ9Y315 318 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 PCDHB2Q9Y5E7 798 aa10.72□□□□□ -0.69
VPS13B-212ENST00000524330 DDX3XO00571 662 aaKnown RBP eCLIP10.71□□□□□ -0.69
VPS13B-212ENST00000524330 CABYRO75952 493 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 MOCS3O95396 460 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 STAG3L1P0CL83 205 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 MYBL1P10243 752 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 CYBAP13498 195 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 MCM3P25205 808 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 GRM5P41594 1212 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 APLP1P51693 650 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 CRYBB1P53674 252 aaPredicted RBP10.71□□□□□ -0.69
VPS13B-212ENST00000524330 NOP14P78316 857 aaKnown RBP10.71□□□□□ -0.69
VPS13B-212ENST00000524330 NKX3-2P78367 333 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 CDR2Q01850 454 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 SLC27A1Q6PCB7 646 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 GLYCTKQ8IVS8 523 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 SLC30A5Q8TAD4 765 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 RFFLQ8WZ73 363 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 IRX2Q9BZI1 471 aaPredicted RBP10.71□□□□□ -0.69
VPS13B-212ENST00000524330 NIF3L1Q9GZT8 377 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 PDZD7Q9H5P4 517 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 TRIM10Q9UDY6 481 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 LCMT1Q9UIC8 334 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 AJAP1Q9UKB5 411 aaPredicted RBP10.71□□□□□ -0.69
VPS13B-212ENST00000524330 C2CD2Q9Y426 696 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 CEP83Q9Y592 693 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 PCDHB4Q9Y5E5 795 aa10.71□□□□□ -0.69
VPS13B-212ENST00000524330 EVPLQ92817 2033 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 NCANO14594 1321 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 MROH7Q68CQ1 1323 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 A0A1B0GUA9 196 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 RCCD1A6NED2 376 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 ABLIM1O14639 778 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 CYP26A1O43174 497 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 MED7O43513 233 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 TSPAN1O60635 241 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 IGHA2P01877 340 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 HMGCRP04035 888 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 GJB1P08034 283 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 DARSP14868 501 aaKnown RBP10.7□□□□□ -0.7
VPS13B-212ENST00000524330 CYP11B1P15538 503 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 ATF7P17544 494 aaPredicted RBP10.7□□□□□ -0.7
VPS13B-212ENST00000524330 ARF4P18085 180 aaPredicted RBP10.7□□□□□ -0.7
VPS13B-212ENST00000524330 EIF4BP23588 611 aaKnown RBP10.7□□□□□ -0.7
VPS13B-212ENST00000524330 GALCP54803 685 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 GPC5P78333 572 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 RBP5P82980 135 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 PURAQ00577 322 aaKnown RBP10.7□□□□□ -0.7
VPS13B-212ENST00000524330 MYO1EQ12965 1108 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 TMEM132DQ14C87 1099 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 ZNF699Q32M78 642 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 ZNF667Q5HYK9 610 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 MARCH8Q5T0T0 291 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 LIN9Q5TKA1 542 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 EEF1DP3Q658K8 133 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 RNF180Q86T96 592 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 PDCL2Q8N4E4 241 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 MSANTD4Q8NCY6 345 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 RAET1EQ8TD07 263 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 ZNF516Q92618 1163 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 RABGGTAQ92696 567 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 KAT2BQ92831 832 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 KREMEN1Q96MU8 473 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 GPR88Q9GZN0 384 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 HAPLN2Q9GZV7 340 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 ITGA11Q9UKX5 1188 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 PCDHGC5Q9Y5F6 944 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 CASP8AP2Q9UKL3 1982 aa10.7□□□□□ -0.7
VPS13B-212ENST00000524330 CES2O00748 559 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 B4GALT5O43286 388 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 BUB1O43683 1085 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 FAM189A1O60320 539 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 TBC1D8O95759 1140 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 ASS1P00966 412 aaKnown RBP10.69□□□□□ -0.7
VPS13B-212ENST00000524330 KRT19P08727 400 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 TNFSF9P41273 254 aa10.69□□□□□ -0.7
VPS13B-212ENST00000524330 OSTNP61366 133 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms