RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 LIN9Q5TKA1 542 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 EEF1DP3Q658K8 133 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 ANKS3Q6ZW76 656 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 DAW1Q8N136 415 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 TMEM161BQ8NDZ6 487 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 RASSF8Q8NHQ8 419 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 RABGGTAQ92696 567 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 ASIC4Q96FT7 647 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 B3GALT6Q96L58 329 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 PNMA5Q96PV4 448 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 PPP1R10Q96QC0 940 aaKnown RBP7.99□□□□□ -1.13
HTT-212ENST00000513639 CLSTN3Q9BQT9 956 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 PAAF1Q9BRP4 392 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 RUSC1Q9BVN2 902 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 TARS2Q9BW92 718 aaKnown RBP7.99□□□□□ -1.13
HTT-212ENST00000513639 KCNK12Q9HB15 430 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 ODF2LQ9ULJ1 636 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 USP20Q9Y2K6 914 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 BACE2Q9Y5Z0 518 aa7.99□□□□□ -1.13
HTT-212ENST00000513639 PTPRZ1P23471 2315 aaPredicted RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 MYO10Q9HD67 2058 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 H7C4K7 107 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 RFPL2O75678 378 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 KIF4AO95239 1232 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 CD2BP2O95400 341 aaKnown RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 KRT18P05783 430 aaKnown RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 CLTAP09496 248 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 MAPTP10636 758 aaKnown RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 PDIA4P13667 645 aaKnown RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 RPL17P18621 184 aaKnown RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 FGFR3P22607 806 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 PROZP22891 400 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 PAX3P23760 479 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 MARCKSP29966 332 aaPredicted RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 HOXA9P31269 272 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 GBP2P32456 591 aaPredicted RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 ELF1P32519 619 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 OR1D2P34982 312 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 MATR3P43243 847 aaKnown RBP eCLIP7.98□□□□□ -1.13
HTT-212ENST00000513639 CLCN5P51795 746 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 CLCNKBP51801 687 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 OSTNP61366 133 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 RAD51AP2Q09MP3 1159 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 CUL4AQ13619 759 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 ARSHQ5FYA8 562 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 RTP2Q5QGT7 225 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 PPM1LQ5SGD2 360 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 PRSS55Q6UWB4 352 aaPredicted RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 KCNK18Q7Z418 384 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 MYCT1Q8N699 235 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 APPL2Q8NEU8 664 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 KCNN1Q92952 543 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 KIF12Q96FN5 646 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 BICD1Q96G01 975 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 INTS4Q96HW7 963 aaKnown RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 PLIN2Q99541 437 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 OXCT2Q9BYC2 517 aaPredicted RBP7.98□□□□□ -1.13
HTT-212ENST00000513639 CDT1Q9H211 546 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 MFSD1Q9H3U5 465 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 PARVGQ9HBI0 331 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 EPS15L1Q9UBC2 864 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 WNT16Q9UBV4 365 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 CCDC39Q9UFE4 941 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 CDH22Q9UJ99 828 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 MAFFQ9ULX9 164 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 NUB1Q9Y5A7 615 aa7.98□□□□□ -1.13
HTT-212ENST00000513639 RIF1Q5UIP0 2472 aaKnown RBP7.97□□□□□ -1.13
HTT-212ENST00000513639 SYN3O14994 580 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 XPOTO43592 962 aaKnown RBP7.97□□□□□ -1.13
HTT-212ENST00000513639 FAM13AO94988 1023 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 EDN1P05305 212 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 ASGR2P07307 311 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 POU2F2P09086 479 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 LAMP2P13473 410 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 FSHRP23945 695 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 TXLNAP40222 546 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 NHLH1Q02575 133 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 MCL1Q07820 350 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 MAPK7Q13164 816 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 NOLC1Q14978 699 aaKnown RBP eCLIP7.97□□□□□ -1.13
HTT-212ENST00000513639 SF3A1Q15459 793 aaKnown RBP7.97□□□□□ -1.13
HTT-212ENST00000513639 TMEM119Q4V9L6 283 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 AXDND1Q5T1B0 1012 aaPredicted RBP7.97□□□□□ -1.13
HTT-212ENST00000513639 ASTLQ6HA08 431 aaPredicted RBP7.97□□□□□ -1.13
HTT-212ENST00000513639 TAS1R3Q7RTX0 852 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 HAUS6Q7Z4H7 955 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 GPBP1Q86WP2 473 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 GLYCTKQ8IVS8 523 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 CD302Q8IX05 232 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 SLC44A3Q8N4M1 653 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 KRI1Q8N9T8 703 aaKnown RBP7.97□□□□□ -1.13
HTT-212ENST00000513639 ZNF461Q8TAF7 563 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 HASPINQ8TF76 798 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 ZNF707Q96C28 371 aaPredicted RBP7.97□□□□□ -1.13
HTT-212ENST00000513639 CCSER1Q9C0I3 900 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 ZSCAN16Q9H4T2 348 aaPredicted RBP7.97□□□□□ -1.13
HTT-212ENST00000513639 CNTN3Q9P232 1028 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 MTRRQ9UBK8 725 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 FBXL21Q9UKT6 434 aa7.97□□□□□ -1.13
HTT-212ENST00000513639 KCNH3Q9ULD8 1083 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms