RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 LTBP4Q8N2S1 1624 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 EXOC1LA0A1B0GW35 172 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 IPO5O00410 1097 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 KCNQ2O43526 872 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 PLA2G6O60733 806 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 KCNJ2P63252 427 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 MCL1Q07820 350 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 LBRQ14739 615 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 SIX1Q15475 284 aaPredicted RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 CLEC16AQ2KHT3 1053 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 USH1GQ495M9 461 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 ZC2HC1CQ53FD0 456 aaPredicted RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 SLC45A4Q5BKX6 768 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 ZC3H12AQ5D1E8 599 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 WDR78Q5VTH9 848 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 TATDN1Q6P1N9 297 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 DRICH1Q6PGQ1 229 aaPredicted RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 PPFIBP2Q8ND30 876 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 FBXL13Q8NEE6 735 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 STK32AQ8WU08 396 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 SLC20A1Q8WUM9 679 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 PSPC1Q8WXF1 523 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 DCLRE1BQ9H816 532 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 C17orf75Q9HAS0 396 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 CYP39A1Q9NYL5 469 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 ANAPC7Q9UJX3 599 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 TRAFD1O14545 582 aaPredicted RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 CLDN3O15551 220 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 ENTPD3O75355 529 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 NDUFB10O96000 172 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 ATP5BP06576 529 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 GSTA2P09210 222 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 DLATP10515 647 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 CYP11B1P15538 503 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 PCK1P35558 622 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 COPB2P35606 906 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 NSFP46459 744 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 SARNPP82979 210 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 GTF2BQ00403 316 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 RBBP5Q15291 538 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 PDK4Q16654 411 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 IZUMO3Q5VZ72 239 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 GSTA5Q7RTV2 222 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 SRRM1Q8IYB3 904 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 KATNAL2Q8IYT4 538 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 EXD1Q8NHP7 514 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 UHMK1Q8TAS1 419 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 FIZ1Q96SL8 496 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 LXNQ9BS40 222 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 DDX4Q9NQI0 724 aaKnown RBP6.51□□□□□ -1.37
HERC4-209ENST00000473533 C1orf112Q9NSG2 853 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 ZFATQ9P243 1243 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 AGAP1Q9UPQ3 857 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 NAALADL1Q9UQQ1 740 aa6.51□□□□□ -1.37
HERC4-209ENST00000473533 SFI1A8K8P3 1242 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 EML1O00423 815 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 AHCYL1O43865 530 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 ZBED4O75132 1171 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 SMNDC1O75940 238 aaKnown RBP eCLIP6.5□□□□□ -1.37
HERC4-209ENST00000473533 PROSCO94903 275 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 KRT16P08779 473 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 VIL1P09327 827 aaKnown RBP6.5□□□□□ -1.37
HERC4-209ENST00000473533 SKIP12755 728 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 ACADSP16219 412 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 IBSPP21815 317 aaPredicted RBP6.5□□□□□ -1.37
HERC4-209ENST00000473533 FMO1Q01740 532 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 TAP1Q03518 808 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 MORF4L2Q15014 288 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 LRRC14Q15048 493 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 KLHL38Q2WGJ6 581 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 WDR44Q5JSH3 913 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 C6orf163Q5TEZ5 329 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 CENPUQ71F23 418 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 PODNQ7Z5L7 613 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 TRIM42Q8IWZ5 723 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.5□□□□□ -1.373e-6■■■■■ 69.6
HERC4-209ENST00000473533 FITM2Q8N6M3 262 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 ENDOVQ8N8Q3 282 aaKnown RBP6.5□□□□□ -1.37
HERC4-209ENST00000473533 FAXDC2Q96IV6 333 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 CCDC28BQ9BUN5 200 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 MAP3K20Q9NYL2 800 aaKnown RBP6.5□□□□□ -1.37
HERC4-209ENST00000473533 LNPEPQ9UIQ6 1025 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 LRRC42Q9Y546 428 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 PCDHB2Q9Y5E7 798 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 CHMP2AO43633 222 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 TJP3O95049 919 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 SGPL1O95470 568 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 SERPINB2P05120 415 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 KRT15P19012 456 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 TAC1P20366 129 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 ATP6V1C1P21283 382 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 PTPN4P29074 926 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 ALDH1B1P30837 517 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 MAGEA4P43358 317 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 CRKP46108 304 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 GCLMP48507 274 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 KCNA1Q09470 495 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 GRIK3Q13003 919 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 TMED2Q15363 201 aa6.5□□□□□ -1.37
HERC4-209ENST00000473533 CCDC6Q16204 474 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms