RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 HSP90AA2PQ14568 343 aaPredicted RBP9.17□□□□□ -0.94
CDH13-203ENST00000431540 PPP2R5AQ15172 486 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 PLA2G4FQ68DD2 849 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 KANK3Q6NY19 840 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 C1orf228Q6PIY5 440 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 TAS1R1Q7RTX1 841 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 TPH2Q8IWU9 490 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 KCTD17Q8N5Z5 321 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 NELL1Q92832 810 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 UROC1Q96N76 676 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 NACC1Q96RE7 527 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 MYADMQ96S97 322 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 EIF2AK1Q9BQI3 630 aaKnown RBP9.17□□□□□ -0.94
CDH13-203ENST00000431540 SH2D3AQ9BRG2 576 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 TTPALQ9BTX7 342 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 POLR3CQ9BUI4 534 aaPredicted RBP9.17□□□□□ -0.94
CDH13-203ENST00000431540 BCO2Q9BYV7 579 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 GPR62Q9BZJ7 368 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 TBC1D17Q9HA65 648 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 TUFT1Q9NNX1 390 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 TRPV5Q9NQA5 729 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 XPNPEP1Q9NQW7 623 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 ARHGEF3Q9NR81 526 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 MIOSQ9NXC5 875 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 DLL3Q9NYJ7 618 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 FBXW11Q9UKB1 542 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 MRPS17Q9Y2R5 130 aaKnown RBP9.17□□□□□ -0.94
CDH13-203ENST00000431540 PCDHGA2Q9Y5H1 932 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 BACE2Q9Y5Z0 518 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 DMXL1Q9Y485 3027 aa9.17□□□□□ -0.94
CDH13-203ENST00000431540 PRR5-ARHGAP8B1AHC4 643 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 ACKR2O00590 384 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 FOXD2O60548 495 aaPredicted RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 ECI2O75521 394 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 SSBP05455 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
CDH13-203ENST00000431540 SP9P0CG40 484 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 GLULP15104 373 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 MLH1P40692 756 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 SCNN1GP51170 649 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 NRLP54845 237 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 ARHGAP8P85298 464 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 CAPSQ13938 189 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 LIN9Q5TKA1 542 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 CDCA2Q69YH5 1023 aaPredicted RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 ZBTB8OSQ8IWT0 167 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 PJA1Q8NG27 643 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 LNX1Q8TBB1 728 aaPredicted RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 GPR152Q8TDT2 470 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 RIN2Q8WYP3 895 aaPredicted RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 SECISBP2LQ93073 1101 aaKnown RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 GJA10Q969M2 543 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 CLDN23Q96B33 292 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 DYDC2Q96IM9 177 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 MTMR9Q96QG7 549 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 ADPGKQ9BRR6 497 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 EIF2AQ9BY44 585 aaKnown RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 OXCT2Q9BYC2 517 aaPredicted RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 TTC12Q9H892 705 aaPredicted RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 PDRG1Q9NUG6 133 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 RGL1Q9NZL6 768 aa9.16□□□□□ -0.94
CDH13-203ENST00000431540 WRAP73Q9P2S5 460 aaPredicted RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 PRG3Q9Y2Y8 225 aaPredicted RBP9.16□□□□□ -0.94
CDH13-203ENST00000431540 PDCD11Q14690 1871 aaKnown RBP9.15□□□□□ -0.94
CDH13-203ENST00000431540 MAN2B1O00754 1011 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 C2CD2LO14523 706 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 TBC1D4O60343 1298 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 KINO60870 393 aaKnown RBP9.15□□□□□ -0.94
CDH13-203ENST00000431540 RFPL2O75678 378 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 CFHP08603 1231 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 FGFR3P22607 806 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 GLRA2P23416 452 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 PAX3P23760 479 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 KRT2P35908 639 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 FOXC1Q12948 553 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 PPP2R5DQ14738 602 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 CALCRLQ16602 461 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 MAPK6Q16659 721 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 DCAF4L1Q3SXM0 396 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 LONRF3Q496Y0 759 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 SLC44A4Q53GD3 710 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 PPM1LQ5SGD2 360 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 PIK3AP1Q6ZUJ8 805 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 ANKS3Q6ZW76 656 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 PALB2Q86YC2 1186 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 LEMD2Q8NC56 503 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 ZBTB44Q8NCP5 570 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 ZNF461Q8TAF7 563 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 KCNG4Q8TDN1 519 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 DNASE1L2Q92874 299 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 TNFRSF25Q93038 417 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 E2F7Q96AV8 911 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 ZFP42Q96MM3 310 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 CCDC43Q96MW1 224 aaKnown RBP9.15□□□□□ -0.94
CDH13-203ENST00000431540 CLSTN3Q9BQT9 956 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 GPR88Q9GZN0 384 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 SMOC2Q9H3U7 446 aa9.15□□□□□ -0.94
CDH13-203ENST00000431540 ARHGEF37A1IGU5 675 aa9.14□□□□□ -0.95
CDH13-203ENST00000431540 ZNF197O14709 1029 aa9.14□□□□□ -0.95
CDH13-203ENST00000431540 NARSO43776 548 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms