RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 XKR4Q5GH76 650 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 FAM173BQ6P4H8 233 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 SMG7Q92540 1137 aaKnown RBP16.63■□□□□ 0.25
USB1-202ENST00000423271 CALML4Q96GE6 196 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 TOPORSQ9NS56 1045 aaPredicted RBP16.63■□□□□ 0.25
USB1-202ENST00000423271 DPP7Q9UHL4 492 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 DOCK8Q8NF50 2099 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 DOCK6Q96HP0 2047 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 TOM1L1O75674 476 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 BRCC3P46736 316 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 SMTNP53814 917 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 NCKAP1LP55160 1127 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 ELAVL2Q12926 359 aaKnown RBP16.62■□□□□ 0.25
USB1-202ENST00000423271 NOLC1Q14978 699 aaKnown RBP eCLIP16.62■□□□□ 0.25
USB1-202ENST00000423271 PTPAQ15257 358 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 ELMSAN1Q6PJG2 1045 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 DCLRE1AQ6PJP8 1040 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.62■□□□□ 0.25
USB1-202ENST00000423271 OTOP3Q7RTS5 596 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 HDAC7Q8WUI4 952 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 RAD54LQ92698 747 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 ACSF2Q96CM8 615 aaPredicted RBP16.62■□□□□ 0.25
USB1-202ENST00000423271 ACAP3Q96P50 834 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 HAPLN2Q9GZV7 340 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 PLEKHA4Q9H4M7 779 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 WDR6Q9NNW5 1121 aaKnown RBP16.62■□□□□ 0.25
USB1-202ENST00000423271 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
USB1-202ENST00000423271 FBXW11Q9UKB1 542 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 PDCD11Q14690 1871 aaKnown RBP16.62■□□□□ 0.25
USB1-202ENST00000423271 CLUHO75153 1309 aa16.62■□□□□ 0.25
USB1-202ENST00000423271 PAPLNO95428 1278 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 C1RP00736 705 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 FGFR3P22607 806 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 TKTP29401 623 aaKnown RBP16.61■□□□□ 0.25
USB1-202ENST00000423271 SPECC1Q5M775 1068 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 USP49Q70CQ1 688 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 SUGP1Q8IWZ8 645 aaKnown RBP16.61■□□□□ 0.25
USB1-202ENST00000423271 TMEM130Q8N3G9 435 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 FBXL6Q8N531 539 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 RASSF8Q8NHQ8 419 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 C18orf25Q96B23 403 aaPredicted RBP16.61■□□□□ 0.25
USB1-202ENST00000423271 UROC1Q96N76 676 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 RHOBTB2Q9BYZ6 727 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 ZDHHC7Q9NXF8 308 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 CNTN3Q9P232 1028 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 LARSQ9P2J5 1176 aaKnown RBP16.61■□□□□ 0.25
USB1-202ENST00000423271 ODF2LQ9ULJ1 636 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 PIEZO1Q92508 2521 aa16.61■□□□□ 0.25
USB1-202ENST00000423271 K7ENM7 598 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 PODXLO00592 558 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 ZMYND10O75800 440 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 FAM13AO94988 1023 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 KCNE1P15382 129 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 MARCKSP29966 332 aaPredicted RBP16.6■□□□□ 0.25
USB1-202ENST00000423271 VCPP55072 806 aaKnown RBP16.6■□□□□ 0.25
USB1-202ENST00000423271 MCL1Q07820 350 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 SLC10A6Q3KNW5 377 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 IER5LQ5T953 404 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 FOXD4L5Q5VV16 416 aaPredicted RBP16.6■□□□□ 0.25
USB1-202ENST00000423271 RSPO2Q6UXX9 243 aaPredicted RBP16.6■□□□□ 0.25
USB1-202ENST00000423271 CYP26C1Q6V0L0 522 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 ZPBP2Q6X784 338 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 HAUS6Q7Z4H7 955 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 UBALD2Q8IYN6 164 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 FOXD4L4Q8WXT5 416 aaPredicted RBP16.6■□□□□ 0.25
USB1-202ENST00000423271 DDX27Q96GQ7 796 aaKnown RBP16.6■□□□□ 0.25
USB1-202ENST00000423271 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 MYADMQ96S97 322 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 PRKD2Q9BZL6 878 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 PIDD1Q9HB75 910 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 SLC38A7Q9NVC3 462 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 MTRRQ9UBK8 725 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 KCNG1Q9UIX4 513 aa16.6■□□□□ 0.25
USB1-202ENST00000423271 FBXO2Q9UK22 296 aaPredicted RBP16.6■□□□□ 0.25
USB1-202ENST00000423271 KRT18P05783 430 aaKnown RBP16.59■□□□□ 0.25
USB1-202ENST00000423271 CXCL8P10145 99 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 GBP2P32456 591 aaPredicted RBP16.59■□□□□ 0.25
USB1-202ENST00000423271 OR1D2P34982 312 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 ZNF131P52739 623 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 CEBPZQ03701 1054 aaKnown RBP16.59■□□□□ 0.25
USB1-202ENST00000423271 PKP1Q13835 747 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 MYCT1Q8N699 235 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 PRSS33Q8NF86 280 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 LARP4BQ92615 738 aaKnown RBP16.59■□□□□ 0.25
USB1-202ENST00000423271 BICD1Q96G01 975 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 CLIC6Q96NY7 704 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 CCSER1Q9C0I3 900 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 PARVGQ9HBI0 331 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 TUBGCP4Q9UGJ1 667 aa16.59■□□□□ 0.25
USB1-202ENST00000423271 MYH15Q9Y2K3 1946 aa16.58■□□□□ 0.25
USB1-202ENST00000423271 H0YCG3 227 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 CLDN3O15551 220 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 C8AP07357 584 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 TNFSF9P41273 254 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.24
USB1-202ENST00000423271 SPAG1Q07617 926 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 ZBTB41Q5SVQ8 909 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 LIN9Q5TKA1 542 aa16.58■□□□□ 0.24
USB1-202ENST00000423271 PDXDC1Q6P996 788 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms