RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 COQ4Q9Y3A0 265 aa18.2■□□□□ 0.5
SSB-202ENST00000409333 TTC3P53804 2025 aa18.2■□□□□ 0.5
SSB-202ENST00000409333 IBSPP21815 317 aaPredicted RBP18.19■□□□□ 0.5
SSB-202ENST00000409333 ADKP55263 362 aaKnown RBP18.19■□□□□ 0.5
SSB-202ENST00000409333 CETN1Q12798 172 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 BIRC3Q13489 604 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 TCTN1Q2MV58 587 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 ALKAL1Q6UXT8 129 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 RTN4RL1Q86UN2 441 aaPredicted RBP18.19■□□□□ 0.5
SSB-202ENST00000409333 PPFIBP1Q86W92 1011 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 FBXL13Q8NEE6 735 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 DBF4BQ8NFT6 615 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 LPPQ93052 612 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 ELMO3Q96BJ8 720 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 ZMAT2Q96NC0 199 aaKnown RBP18.19■□□□□ 0.5
SSB-202ENST00000409333 TRAIPQ9BWF2 469 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 GANQ9H2C0 597 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 PRDM5Q9NQX1 630 aaPredicted RBP18.19■□□□□ 0.5
SSB-202ENST00000409333 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.19■□□□□ 0.55e-6■□□□□ 9.9
SSB-202ENST00000409333 RNF19AQ9NV58 838 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 PCDH10Q9P2E7 1040 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 VNN1O95497 513 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 TMEM191BP0C7N4 346 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 ATF7P17544 494 aaPredicted RBP18.19■□□□□ 0.5
SSB-202ENST00000409333 ITGB8P26012 769 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 RAB27AP51159 221 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 TRIM14Q14142 442 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 GLRA4Q5JXX5 417 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 EHBP1Q8NDI1 1231 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 NUP58Q9BVL2 599 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 PLEKHA5Q9HAU0 1116 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 CNTN3Q9P232 1028 aa18.19■□□□□ 0.5
SSB-202ENST00000409333 A0A0U1RQF3 1178 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 TRIM43BA6NCK2 446 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 MFAP3LO75121 409 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 HLA-DRAP01903 254 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 AP3M2P53677 418 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 TMEM132DQ14C87 1099 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 DUOXA2Q1HG44 320 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 FIGNQ5HY92 759 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 KLHDC7AQ5VTJ3 777 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 GJB7Q6PEY0 223 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 TRAPPC11Q7Z392 1133 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 DEFB128Q7Z7B8 93 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 CD302Q8IX05 232 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 TC2NQ8N9U0 490 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 TRIM43Q96BQ3 446 aaPredicted RBP18.18■□□□□ 0.5
SSB-202ENST00000409333 KIF12Q96FN5 646 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 ANKRD36BP1Q96IX9 119 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 PLCB1Q9NQ66 1216 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 RGS18Q9NS28 235 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 RAB20Q9NX57 234 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 AJAP1Q9UKB5 411 aaPredicted RBP18.18■□□□□ 0.5
SSB-202ENST00000409333 C2CD2Q9Y426 696 aa18.18■□□□□ 0.5
SSB-202ENST00000409333 FNDC1Q4ZHG4 1894 aaPredicted RBP18.18■□□□□ 0.5
SSB-202ENST00000409333 ZNF623O75123 536 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 TNNC2P02585 160 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 CXCL10P02778 98 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 ITGA4P13612 1032 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 PIK3CAP42336 1068 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 POLR2FP61218 127 aaKnown RBP18.17■□□□□ 0.5
SSB-202ENST00000409333 LRMPQ12912 555 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 MRPL10Q7Z7H8 261 aaKnown RBP18.17■□□□□ 0.5
SSB-202ENST00000409333 SEPT8Q92599 483 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 ZFP42Q96MM3 310 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 PI4K2AQ9BTU6 479 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 FTHL17Q9BXU8 183 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 TSPYL2Q9H2G4 693 aaPredicted RBP18.17■□□□□ 0.5
SSB-202ENST00000409333 NLRC4Q9NPP4 1024 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 CAPN11Q9UMQ6 739 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 FHOD1Q9Y613 1164 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 PTPRSQ13332 1948 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 A0A1W2PQJ5 194 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 C9IYK1 514 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 UCHL3P15374 230 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 GUCY2FP51841 1108 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 GSDMDP57764 484 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 XKR4Q5GH76 650 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 PHLDB3Q6NSJ2 640 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 AGMOQ6ZNB7 445 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 HACE1Q8IYU2 909 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 RNF169Q8NCN4 708 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 CEP72Q9P209 647 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 APEX2Q9UBZ4 518 aa18.17■□□□□ 0.5
SSB-202ENST00000409333 AKR1B15C9JRZ8 316 aaPredicted RBP18.16■□□□□ 0.5
SSB-202ENST00000409333 KIAA0355O15063 1070 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 PHACTR2O75167 634 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 PARNO95453 639 aaKnown RBP18.16■□□□□ 0.5
SSB-202ENST00000409333 TIMP1P01033 207 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 CST3P01034 146 aaPredicted RBP18.16■□□□□ 0.5
SSB-202ENST00000409333 TPM1P09493 284 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 MLH1P40692 756 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 ZNF598Q86UK7 904 aaKnown RBP18.16■□□□□ 0.5
SSB-202ENST00000409333 ECHDC2Q86YB7 292 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 NT5DC4Q86YG4 428 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 ARHGEF19Q8IW93 802 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 C1orf127Q8N9H9 656 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 CACTINQ8WUQ7 758 aaKnown RBP18.16■□□□□ 0.5
SSB-202ENST00000409333 APBB2Q92870 758 aa18.16■□□□□ 0.5
SSB-202ENST00000409333 VWCEQ96DN2 955 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms