RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 CACNA2D1P54289 1103 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 CAV1Q03135 178 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 CTTNQ14247 550 aaKnown RBP15.89■□□□□ 0.13
UBAP1-202ENST00000359544 TCEAL1Q15170 157 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 SLC4A8Q2Y0W8 1093 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 ZNF449Q6P9G9 518 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 SRRM1Q8IYB3 904 aaKnown RBP15.89■□□□□ 0.13
UBAP1-202ENST00000359544 PPFIBP2Q8ND30 876 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 DYNLL2Q96FJ2 89 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 ZNF408Q9H9D4 720 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 SAR1AQ9NR31 198 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 AAASQ9NRG9 546 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 PCDHA12Q9UN75 941 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 THAP12O43422 761 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 T-ENOLP0DO92 83 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 PRDX5P30044 214 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 GSTA3Q16772 222 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 SNX30Q5VWJ9 437 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 RGS9BPQ6ZS82 235 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 SLC13A5Q86YT5 568 aaPredicted RBP15.89■□□□□ 0.13
UBAP1-202ENST00000359544 RIBC1Q8N443 379 aaPredicted RBP15.89■□□□□ 0.13
UBAP1-202ENST00000359544 ATL2Q8NHH9 583 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 KRT35Q92764 455 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 SLCO2A1Q92959 643 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 PPP1R12CQ9BZL4 782 aa15.89■□□□□ 0.13
UBAP1-202ENST00000359544 SEPT11Q9NVA2 429 aaKnown RBP15.89■□□□□ 0.13
UBAP1-202ENST00000359544 PSME4Q14997 1843 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 CLRN2A0PK11 232 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 WNT10BO00744 389 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 NR3C1P04150 777 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 DRAP1Q14919 205 aaPredicted RBP15.88■□□□□ 0.13
UBAP1-202ENST00000359544 KPNB1Q14974 876 aaKnown RBP15.88■□□□□ 0.13
UBAP1-202ENST00000359544 RHBDF2Q6PJF5 856 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 C4orf50Q6ZRC1 276 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 PTPRN2Q92932 1015 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 PRMT6Q96LA8 375 aaPredicted RBP15.88■□□□□ 0.13
UBAP1-202ENST00000359544 CCDC28BQ9BUN5 200 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 VAT1LQ9HCJ6 419 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 LARSQ9P2J5 1176 aaKnown RBP15.88■□□□□ 0.13
UBAP1-202ENST00000359544 ADAMTSL1Q8N6G6 1762 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 TJP3O95049 919 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 SH3BGRP55822 239 aaPredicted RBP15.88■□□□□ 0.13
UBAP1-202ENST00000359544 SESN3P58005 492 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 CDR2Q01850 454 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 NR1H3Q13133 447 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 FOXB2Q5VYV0 432 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 ZC3H18Q86VM9 953 aaKnown RBP15.88■□□□□ 0.13
UBAP1-202ENST00000359544 ZDHHC14Q8IZN3 488 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 SCG3Q8WXD2 468 aaKnown RBP15.88■□□□□ 0.13
UBAP1-202ENST00000359544 SNF8Q96H20 258 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 LRRC19Q9H756 370 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 ZNF287Q9HBT7 754 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 DNAJC12Q9UKB3 198 aa15.88■□□□□ 0.13
UBAP1-202ENST00000359544 A0A1W2PRG0 241 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 EDIL3O43854 480 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 TNNI2P48788 182 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 CASP5P51878 434 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 FSTL1Q12841 308 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 RNF207Q6ZRF8 634 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 SYDE1Q6ZW31 735 aaPredicted RBP15.87■□□□□ 0.13
UBAP1-202ENST00000359544 HAS1Q92839 578 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 NAP1L4Q99733 375 aaKnown RBP15.87■□□□□ 0.13
UBAP1-202ENST00000359544 UBN1Q9NPG3 1134 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 NAALADL1Q9UQQ1 740 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 SLC4A7Q9Y6M7 1214 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 SLC34A1Q06495 639 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 SPARCL1Q14515 664 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 STAT4Q14765 748 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 SLC45A4Q5BKX6 768 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 LRRC74BQ6ZQY2 392 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 BORCS6Q96GS4 357 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 TUBB6Q9BUF5 446 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 ASIC3Q9UHC3 531 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 ZFP69BQ9UJL9 534 aa15.87■□□□□ 0.13
UBAP1-202ENST00000359544 MYO3BQ8WXR4 1341 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 A0A1B0GVG6 124 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 RASA4BC9J798 803 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 RASA4O43374 803 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 EDF1O60869 148 aaKnown RBP15.86■□□□□ 0.13
UBAP1-202ENST00000359544 CBX6O95503 412 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 ASMTLO95671 621 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 CHKAP35790 457 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 MARCKSL1P49006 195 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 CACNB3P54284 484 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 KRT17Q04695 432 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 DNAJC3Q13217 504 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 GIT2Q14161 759 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 RCN1Q15293 331 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 KHDC1Q4VXA5 237 aaKnown RBP15.86■□□□□ 0.13
UBAP1-202ENST00000359544 USP17L2Q6R6M4 530 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 CYP4X1Q8N118 509 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 PHC3Q8NDX5 983 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 C10orf82Q8WW14 230 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 GATA6Q92908 595 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 NR1H4Q96RI1 486 aaPredicted RBP15.86■□□□□ 0.13
UBAP1-202ENST00000359544 DHX36Q9H2U1 1008 aaKnown RBP15.86■□□□□ 0.13
UBAP1-202ENST00000359544 TBK1Q9UHD2 729 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 POTEB3A0JP26 581 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 TMEM110-MUSTN1A8MSY1 372 aa15.86■□□□□ 0.13
UBAP1-202ENST00000359544 FOXO6A8MYZ6 492 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms