RNA–Protein interactions for RNA: ENST00000265849.11

PMS2-201, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS2, Length 2,855 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-201ENST00000265849 DDX43Q9NXZ2 648 aaKnown RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 SAP30BPQ9UHR5 308 aaKnown RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 SLC4A7Q9Y6M7 1214 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 GSC2O15499 205 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 ATMINO43313 823 aaPredicted RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 PSMC2P35998 433 aaKnown RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 NOVP48745 357 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 CDK8P49336 464 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 MCL1Q07820 350 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 LLGL1Q15334 1064 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 TRIP13Q15645 432 aaPredicted RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 PLEKHG4Q58EX7 1191 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 MYLK4Q86YV6 388 aaPredicted RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 ARHGAP18Q8N392 663 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 SYT2Q8N9I0 419 aaPredicted RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 C9orf72Q96LT7 481 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 NR1H4Q96RI1 486 aaPredicted RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 LBHD1Q9BQE6 289 aaPredicted RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 BTBD10Q9BSF8 475 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 SPATA16Q9BXB7 569 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 UBN1Q9NPG3 1134 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 ATXN10Q9UBB4 475 aa12.8□□□□□ -0.36
PMS2-201ENST00000265849 TNRC6CQ9HCJ0 1690 aaKnown RBP12.8□□□□□ -0.36
PMS2-201ENST00000265849 TPD52L2O43399 206 aaKnown RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 SPOPO43791 374 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 TOM1O60784 492 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 CCDC22O60826 627 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 GCNT3O95395 438 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 LYNP07948 512 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 UBTFL6P0CB48 400 aaPredicted RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 IMPDH2P12268 514 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 MFSD4BQ5TF39 518 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 SYDE1Q6ZW31 735 aaPredicted RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 CATSPER3Q86XQ3 398 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 RELL1Q8IUW5 271 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 DTX3LQ8TDB6 740 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 WDR60Q8WVS4 1066 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 ATG4AQ8WYN0 398 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 BTBD6Q96KE9 485 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 ANAPC5Q9UJX4 755 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 MAP3K7O43318 606 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 PENKP01210 267 aaPredicted RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 ABHD2P08910 425 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 ATF2P15336 505 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 ATF3P18847 181 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 NEK3P51956 506 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 SPIRE1Q08AE8 756 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 SLC1A5Q15758 541 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 ZNF746Q6NUN9 644 aaPredicted RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 C16orf86Q6ZW13 317 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 PPFIBP2Q8ND30 876 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 ZNF398Q8TD17 642 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 HAPLN3Q96S86 360 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 DDX50Q9BQ39 737 aaKnown RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 CCDC77Q9BR77 488 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 VCX3BQ9H321 246 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 TRABDQ9H4I3 376 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 VCX3AQ9NNX9 186 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 ARL8BQ9NVJ2 186 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 ZNF212Q9UDV6 495 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
PMS2-201ENST00000265849 MEIS1O00470 390 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 TRIM49P0CI25 452 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 TRIM49CP0CI26 452 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 RPA3P35244 121 aaPredicted RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 NR1H3Q13133 447 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 MYBPC3Q14896 1274 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 KIAA0825Q8IV33 1275 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 MAPKAPK5Q8IW41 473 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 RBM12BQ8IXT5 1001 aaKnown RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 MARCH10Q8NA82 808 aaPredicted RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 CELF1Q92879 486 aaKnown RBP12.79□□□□□ -0.36
PMS2-201ENST00000265849 MKNK1Q9BUB5 465 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 CCDC28BQ9BUN5 200 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 BLOC1S6Q9UL45 172 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 WASF2Q9Y6W5 498 aa12.79□□□□□ -0.36
PMS2-201ENST00000265849 ZWINTO95229 277 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 RRM1P23921 792 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 NFIL3Q16649 462 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 ZNF564Q8TBZ8 553 aaPredicted RBP12.78□□□□□ -0.36
PMS2-201ENST00000265849 PCDHB18PQ96TA0 734 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 HERPUD2Q9BSE4 406 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 ASCC2Q9H1I8 757 aaPredicted RBP12.78□□□□□ -0.36
PMS2-201ENST00000265849 KIAA1586Q9HCI6 787 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 NPHS2Q9NP85 383 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 SMG5Q9UPR3 1016 aaKnown RBP12.78□□□□□ -0.36
PMS2-201ENST00000265849 ATF5Q9Y2D1 282 aaPredicted RBP12.78□□□□□ -0.36
PMS2-201ENST00000265849 TBC1D30Q9Y2I9 924 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 NEU2Q9Y3R4 380 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 UMODL1Q5DID0 1318 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 ZSCAN9O15535 394 aaPredicted RBP12.78□□□□□ -0.36
PMS2-201ENST00000265849 RTP1P59025 263 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 MYL7Q01449 175 aa12.78□□□□□ -0.36
PMS2-201ENST00000265849 SF3B3Q15393 1217 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms