RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 GSSP48637 474 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 SP140Q13342 867 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 FAM209AQ5JX71 171 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 CYP4V2Q6ZWL3 525 aaPredicted RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 NOSTRINQ8IVI9 506 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 ICA1LQ8NDH6 482 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 GAB3Q8WWW8 586 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 GATA6Q92908 595 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 CFAP36Q96G28 342 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 MKNK1Q9BUB5 465 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 STARD7Q9NQZ5 370 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 FAM207AQ9NSI2 230 aaPredicted RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 ATP8A2Q9NTI2 1148 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 ZNF212Q9UDV6 495 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 RABGEF1Q9UJ41 708 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 TTLL3Q9Y4R7 772 aa8.1□□□□□ -1.11
USP29-201ENST00000254181 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 TDRD9Q8NDG6 1382 aaKnown RBP8.1□□□□□ -1.11
USP29-201ENST00000254181 TRIM75PA6NK02 468 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 XPO1O14980 1071 aaKnown RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 CCDC22O60826 627 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 GAS8O95995 478 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 ACADVLP49748 655 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 ERVK-9P63128 1117 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 MYLK3Q32MK0 819 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 KLHDC10Q6PID8 442 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 ZBTB46Q86UZ6 589 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 HEATR4Q86WZ0 1026 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 FOXP4Q8IVH2 680 aaPredicted RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 ADSSL1Q8N142 457 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 PPM1NQ8N819 430 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 ABTB2Q8N961 1025 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 FAM136AQ96C01 138 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 AIFM3Q96NN9 605 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 BARD1Q99728 777 aaKnown RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 LRMDAQ9H2I8 198 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 TMEM60Q9H2L4 133 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 AMACRQ9UHK6 382 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 DCTN4Q9UJW0 460 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 ARHGEF40Q8TER5 1519 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 CLASP2O75122 1294 aaKnown RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 AGTP01019 485 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 IFIT1P09914 478 aaKnown RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 CHRNB1P11230 501 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 BRAFP15056 766 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 MAPK1P28482 360 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 S100A5P33763 92 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 EIF4A3P38919 411 aaKnown RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 BCAP31P51572 246 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 ESRRGP62508 458 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 STRN3Q13033 797 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 COL9A3Q14050 684 aaPredicted RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 E2F2Q14209 437 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 CRY1Q16526 586 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 NEPROQ6NW34 567 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 VASH1Q7L8A9 365 aaPredicted RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 USP38Q8NB14 1042 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 ACMSDQ8TDX5 336 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 HDAC2Q92769 488 aaKnown RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 ACAP3Q96P50 834 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 KATNAL1Q9BW62 490 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 BLZF1Q9H2G9 400 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 SMYD2Q9NRG4 433 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.09□□□□□ -1.11
USP29-201ENST00000254181 APPL1Q9UKG1 709 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 WASF2Q9Y6W5 498 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 CD109Q6YHK3 1445 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 PCDH11XQ9BZA7 1347 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 IQSEC2Q5JU85 1478 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 FUOMA2VDF0 154 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 TBX10O75333 385 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 PALMO75781 387 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 XRCC5P13010 732 aaKnown RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 PTPN4P29074 926 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 RCVRNP35243 200 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 MRPS15P82914 257 aaKnown RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 CD83Q01151 205 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 ROR1Q01973 937 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 ZNF211Q13398 564 aaPredicted RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 LPCAT2Q7L5N7 544 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 GATAD2AQ86YP4 633 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 CLVS1Q8IUQ0 354 aaPredicted RBP8.09□□□□□ -1.11
USP29-201ENST00000254181 ZBED8Q8IZ13 594 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 IFT43Q96FT9 208 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 CABP2Q9NPB3 220 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 CYLDQ9NQC7 956 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 NDFIP2Q9NV92 336 aa8.09□□□□□ -1.11
USP29-201ENST00000254181 TRAPPC8Q9Y2L5 1435 aa8.09□□□□□ -1.12
USP29-201ENST00000254181 RCCD1A6NED2 376 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 CCRL2O00421 344 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 GIPC1O14908 333 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 ACSL4O60488 711 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 KPNA6O60684 536 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 GABBR2O75899 941 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 FECHP22830 423 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 PBLDP30039 288 aaPredicted RBP8.08□□□□□ -1.12
USP29-201ENST00000254181 ENTPD1P49961 510 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 GPC3P51654 580 aa8.08□□□□□ -1.12
USP29-201ENST00000254181 CASP5P51878 434 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms