RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Zc3h14Q8BJ05 735 aaKnown RBP8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Psd4Q8BLR5 1005 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Ncaph2Q8BSP2 607 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Gramd1cQ8CI52 457 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Kcnj14Q8JZN3 434 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Aco2Q99KI0 780 aaKnown RBP8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Gtf2e1Q9D0D5 440 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Galk1Q9R0N0 392 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Nfkb2Q9WTK5 899 aa8.6□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Gm38119A0A0A6YX29 146 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Otud7bB2RUR8 840 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Ptpn20O55082 426 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Mmp2P33434 662 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Idi1P58044 227 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Cmpk2Q3U5Q7 447 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Cep135Q6P5D4 1140 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Prickle3Q80VL3 624 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Slc7a14Q8BXR1 771 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 AjubaQ91XC0 547 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Pin1Q9QUR7 165 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Katna1Q9WV86 491 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 Cntnap1O54991 1385 aa8.59□□□□□ -1.03
Ccdc54-201ENSMUST00000062439 CenpjQ569L8 1344 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Fam135bQ9DAI6 1403 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 A0A1Y7VLE6 161 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Prdm13E9PZZ1 754 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Syn1O88935 706 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Itgb7P26011 806 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Lig1P37913 916 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Shmt1P50431 478 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Gpatch4Q3TFK5 415 aaKnown RBP8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Lgr6Q3UVD5 967 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Rhox3aQ4TU90 215 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Heatr3Q8BQM4 679 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Rbm17Q8JZX4 405 aaKnown RBP8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Spag16Q8K450 639 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Cd276Q8VE98 316 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Lmbr1lQ9D1E5 489 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Exoc2Q9D4H1 924 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Prss23Q9D6X6 382 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 ItgaxQ9QXH4 1169 aa8.58□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Olfr773F6VS78 311 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Kbtbd2G3X9X1 623 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 B3galt2O54905 422 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Znf827Q505G8 1078 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 CcnjlQ5SRT8 387 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Capn11Q6J756 714 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 1700010I14RikQ7TPG0 532 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Lrrc27Q80YS5 523 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Cdk19Q8BWD8 501 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Ppp1r3bQ8C767 284 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Alg9Q8VDI9 611 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Olfr772Q8VGC5 311 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Uqcrc1Q9CZ13 480 aaKnown RBP8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Lrp6O88572 1613 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Atp10bB1AWN4 1474 aa8.57□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Krtap28-13A0A087WQP5 138 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Gm4779A0A1B0GR91 561 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Slc16a6B1AT66 607 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Wdr72D3YYM4 1114 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Nid1P10493 1245 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Wnt10bP48614 389 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Ptgs2Q05769 604 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 F13bQ07968 669 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Gsdma2Q32M21 443 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Sema4bQ62179 823 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Nr2e1Q64104 385 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 AstlQ6HA09 435 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Soga3Q6NZL0 945 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Tmem87bQ8BKU8 555 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Fam126bQ8C729 530 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Glcci1Q8K3I9 537 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 McatQ8R3F5 381 aaKnown RBP8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Bloc1s4Q8VED2 215 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 St13Q99L47 371 aaKnown RBP8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Lysmd3Q99LE3 305 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Zfpl1Q9DB43 310 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Rasgrp2Q9QUG9 608 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Rock2P70336 1388 aa8.56□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Wdr17E9Q271 1322 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Pde11aP0C1Q2 933 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 IduaP48441 634 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 CastP51125 788 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Dnajc30P59041 219 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Atp8b2P98199 1209 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Rplp2P99027 115 aaKnown RBP8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Gm136Q3V037 328 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Dirc2Q8BFQ6 478 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 B3galnt2Q8BG28 504 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Tmem60Q8K174 133 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Pcdha9Q91Y11 979 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Pcdha8Q91Y12 946 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Pcdha6Q91Y14 946 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Fuca2Q99KR8 461 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 FibinQ9CQS3 217 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Pus10Q9D3U0 527 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Speer4f1Q9D5Q6 258 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Tet3Q8BG87 1668 aa8.55□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 PtpruB1AUH1 1446 aa8.54□□□□□ -1.04
Ccdc54-201ENSMUST00000062439 Tex14Q7M6U3 1450 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms