RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 DCN1Q12395 269 aa0.85□□□□□ -2.27
snR54snR54 STF1P01098 86 aa0.84□□□□□ -2.27
snR54snR54 DSF1P0CX08 502 aa0.84□□□□□ -2.27
snR54snR54 YNR073CP0CX09 502 aa0.84□□□□□ -2.27
snR54snR54 OPI1P21957 404 aa0.84□□□□□ -2.27
snR54snR54 PHO88P38264 188 aaPredicted RBP0.84□□□□□ -2.27
snR54snR54 COS8P38723 381 aa0.84□□□□□ -2.27
snR54snR54 YHR022CP38763 256 aa0.84□□□□□ -2.27
snR54snR54 YHR125WP38831 101 aa0.84□□□□□ -2.27
snR54snR54 ASI3P53983 676 aa0.84□□□□□ -2.27
snR54snR54 AKR2Q12013 749 aa0.84□□□□□ -2.27
snR54snR54 COX5AP00424 153 aa0.83□□□□□ -2.28
snR54snR54 MDH2P22133 377 aa0.83□□□□□ -2.28
snR54snR54 MDH3P32419 343 aaKnown RBP RIP-Chip data0.83□□□□□ -2.28not detected
snR54snR54 VTC1P40046 129 aaRIP-Chip data0.83□□□□□ -2.28not detected
snR54snR54 MAL13P53338 473 aa0.83□□□□□ -2.28
snR54snR54 MEU1Q07938 337 aaKnown RBP RIP-Chip data0.83□□□□□ -2.28not detected
snR54snR54 SME1Q12330 94 aaPredicted RBP0.83□□□□□ -2.28
snR54snR54 FMP16Q12497 93 aa0.83□□□□□ -2.28
snR54snR54 DDI2P0CH63 225 aa0.82□□□□□ -2.28
snR54snR54 DDI3P0CH64 225 aa0.82□□□□□ -2.28
snR54snR54 YGL010WP25338 174 aa0.82□□□□□ -2.28
snR54snR54 MSA2P36157 363 aa0.82□□□□□ -2.28
snR54snR54 SPP2Q02521 185 aa0.82□□□□□ -2.28
snR54snR54 CTF19Q02732 369 aa0.82□□□□□ -2.28
snR54snR54 CSI2Q08054 341 aa0.82□□□□□ -2.28
snR54snR54 MRPL23Q12487 163 aaPredicted RBP0.82□□□□□ -2.28
snR54snR54 MET16P18408 261 aaPredicted RBP0.81□□□□□ -2.28
snR54snR54 YBR220CP38318 560 aa0.81□□□□□ -2.28
snR54snR54 SSH1P38353 490 aaKnown RBP0.81□□□□□ -2.28
snR54snR54 COA1P40452 197 aa0.81□□□□□ -2.28
snR54snR54 MRX5P47007 382 aa0.81□□□□□ -2.28
snR54snR54 ERG25P53045 309 aa0.81□□□□□ -2.28
snR54snR54 YGR026WP53217 278 aa0.81□□□□□ -2.28
snR54snR54 ARP5P53946 755 aa0.81□□□□□ -2.28
snR54snR54 YPL119C-AQ3E751 87 aa0.81□□□□□ -2.28
snR54snR54 RPL2AP0CX45 254 aaKnown RBP0.79□□□□□ -2.28
snR54snR54 RPL2BP0CX46 254 aaKnown RBP0.79□□□□□ -2.28
snR54snR54 FPR1P20081 114 aaKnown RBP0.79□□□□□ -2.28
snR54snR54 KRR1P25586 316 aaPredicted RBP0.79□□□□□ -2.28
snR54snR54 OAC1P32332 324 aa0.79□□□□□ -2.28
snR54snR54 PEX18P38855 283 aa0.79□□□□□ -2.28
snR54snR54 AVT2P39981 480 aa0.79□□□□□ -2.28
snR54snR54 DSN1P40568 576 aa0.79□□□□□ -2.28
snR54snR54 NUP57P48837 541 aa0.79□□□□□ -2.28
snR54snR54 YGR219WP53307 113 aa0.79□□□□□ -2.28
snR54snR54 YMR279CQ03263 540 aa0.79□□□□□ -2.28
snR54snR54 MZM1Q03429 123 aaPredicted RBP0.79□□□□□ -2.28
snR54snR54 YLR030WQ07967 263 aa0.79□□□□□ -2.28
snR54snR54 VMA11P32842 164 aa0.78□□□□□ -2.28
snR54snR54 YKL070WP36087 169 aa0.78□□□□□ -2.28
snR54snR54 MRPL40P36534 297 aa0.78□□□□□ -2.28
snR54snR54 ERV15P38312 142 aa0.78□□□□□ -2.28
snR54snR54 YER189WP40104 122 aa0.78□□□□□ -2.28
snR54snR54 YJR012CP47087 207 aa0.78□□□□□ -2.28
snR54snR54 YGL159WP53110 370 aa0.78□□□□□ -2.28
snR54snR54 OST6Q03723 332 aa0.78□□□□□ -2.28
snR54snR54 YDR124WQ04608 324 aa0.78□□□□□ -2.28
snR54snR54 YLR162WQ06235 118 aa0.78□□□□□ -2.28
snR54snR54 YPR147CQ06522 304 aaKnown RBP0.78□□□□□ -2.28
snR54snR54 SIR4P11978 1358 aa0.78□□□□□ -2.28
snR54snR54 YLR462WO13556 202 aa0.77□□□□□ -2.29
snR54snR54 QRI5P32344 111 aa0.77□□□□□ -2.29
snR54snR54 ERG24P32462 438 aaKnown RBP0.77□□□□□ -2.29
snR54snR54 YHR180WP38868 163 aa0.77□□□□□ -2.29
snR54snR54 YEL075CP39972 122 aa0.77□□□□□ -2.29
snR54snR54 DDI1P40087 428 aa0.77□□□□□ -2.29
snR54snR54 YKE4P40544 346 aa0.77□□□□□ -2.29
snR54snR54 YLR413WQ06689 675 aa0.77□□□□□ -2.29
snR54snR54 SSK22P25390 1331 aaPredicted RBP0.76□□□□□ -2.29
snR54snR54 FLO9P39712 1322 aa0.76□□□□□ -2.29
snR54snR54 DBP3P20447 523 aaKnown RBP0.76□□□□□ -2.29
snR54snR54 EHD3P28817 500 aa0.76□□□□□ -2.29
snR54snR54 AGE2P40529 298 aa0.76□□□□□ -2.29
snR54snR54 MRH4P53166 561 aa0.76□□□□□ -2.29
snR54snR54 GOT1Q03554 138 aa0.76□□□□□ -2.29
snR54snR54 NEJ1Q06148 342 aa0.76□□□□□ -2.29
snR54snR54 SNZ3P43545 298 aa0.75□□□□□ -2.29
snR54snR54 BUD25P85052 153 aa0.75□□□□□ -2.29
snR54snR54 SML1Q04964 104 aa0.75□□□□□ -2.29
snR54snR54 FAR8Q05040 523 aa0.75□□□□□ -2.29
snR54snR54 GMC2Q06201 188 aa0.75□□□□□ -2.29
snR54snR54 SYC1Q08553 188 aaPredicted RBP0.75□□□□□ -2.29
snR54snR54 USB1Q12208 290 aaKnown RBP0.75□□□□□ -2.29
snR54snR54 HIS1P00498 297 aaKnown RBP0.74□□□□□ -2.29
snR54snR54 MSW1P04803 379 aa0.74□□□□□ -2.29
snR54snR54 RPL9AP05738 191 aaKnown RBP0.74□□□□□ -2.29
snR54snR54 YKR104WP0CE69 306 aa0.74□□□□□ -2.29
snR54snR54 GRX2P17695 143 aaKnown RBP0.74□□□□□ -2.29
snR54snR54 RPL9BP51401 191 aaKnown RBP0.74□□□□□ -2.29
snR54snR54 YNR062CP53748 327 aa0.74□□□□□ -2.29
snR54snR54 ARR2Q06597 130 aa0.74□□□□□ -2.29
snR54snR54 COQ10Q08058 207 aa0.74□□□□□ -2.29
snR54snR54 SNF8Q12483 233 aa0.74□□□□□ -2.29
snR54snR54 EBP2P36049 427 aaKnown RBP0.73□□□□□ -2.29
snR54snR54 FZO1P38297 855 aa0.73□□□□□ -2.29
snR54snR54 RPL13BP40212 199 aaKnown RBP0.73□□□□□ -2.29
snR54snR54 GTR2P53290 341 aa0.73□□□□□ -2.29
snR54snR54 ATG17Q06410 417 aa0.73□□□□□ -2.29
snR54snR54 RRP40Q08285 240 aaKnown RBP0.73□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms