RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR52, Length 92 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR52snR52 ACC1Q00955 2233 aaKnown RBP-0.76□□□□□ -2.53
snR52snR52 MEI4P29467 408 aa-0.77□□□□□ -2.53
snR52snR52 SRY1P36007 326 aa-0.77□□□□□ -2.53
snR52snR52 DAD2P36162 133 aa-0.77□□□□□ -2.53
snR52snR52 YHL049CP38722 271 aa-0.77□□□□□ -2.53
snR52snR52 LIN1P38852 340 aaPredicted RBP-0.77□□□□□ -2.53
snR52snR52 GDI1P39958 451 aaKnown RBP-0.77□□□□□ -2.53
snR52snR52 TIR3P40552 269 aa-0.77□□□□□ -2.53
snR52snR52 RPL33BP41056 107 aaKnown RBP-0.77□□□□□ -2.53
snR52snR52 CUS2P53830 285 aaPredicted RBP-0.77□□□□□ -2.53
snR52snR52 YPL077CQ02831 240 aa-0.77□□□□□ -2.53
snR52snR52 SEC10Q06245 871 aa-0.77□□□□□ -2.53
snR52snR52 HEM25Q07534 307 aa-0.77□□□□□ -2.53
snR52snR52 RRS1Q08746 203 aaKnown RBP-0.77□□□□□ -2.53
snR52snR52 SAM4Q08985 325 aaKnown RBP-0.77□□□□□ -2.53
snR52snR52 TPO4Q12256 659 aa-0.77□□□□□ -2.53
snR52snR52 RPL4AP10664 362 aaKnown RBP-0.78□□□□□ -2.53
snR52snR52 YHL042WP38729 150 aa-0.78□□□□□ -2.53
snR52snR52 GTO1P48239 356 aa-0.78□□□□□ -2.53
snR52snR52 RPL4BP49626 362 aaKnown RBP-0.78□□□□□ -2.53
snR52snR52 SPP2Q02521 185 aa-0.78□□□□□ -2.53
snR52snR52 DIG2Q03373 323 aaKnown RBP-0.78□□□□□ -2.53
snR52snR52 VBA1Q04301 562 aa-0.78□□□□□ -2.53
snR52snR52 YPR011CQ12251 326 aa-0.78□□□□□ -2.53
snR52snR52 YOS9Q99220 542 aa-0.78□□□□□ -2.53
snR52snR52 YHR139C-AO13536 103 aa-0.79□□□□□ -2.54
snR52snR52 RNR2P09938 399 aaKnown RBP-0.79□□□□□ -2.54
snR52snR52 VMA11P32842 164 aa-0.79□□□□□ -2.54
snR52snR52 LRP1P38801 184 aaKnown RBP-0.79□□□□□ -2.54
snR52snR52 GAA1P39012 614 aa-0.79□□□□□ -2.54
snR52snR52 EDC3P39998 551 aaKnown RBP-0.79□□□□□ -2.54
snR52snR52 NBP35P52920 328 aa-0.79□□□□□ -2.54
snR52snR52 YGL034CP53186 121 aa-0.79□□□□□ -2.54
snR52snR52 DBP9Q06218 594 aaKnown RBP-0.79□□□□□ -2.54
snR52snR52 YDL180WQ12301 547 aa-0.79□□□□□ -2.54
snR52snR52 YLR462WO13556 202 aa-0.8□□□□□ -2.54
snR52snR52 SWD2P36104 329 aaPredicted RBP-0.8□□□□□ -2.54
snR52snR52 YEL075CP39972 122 aa-0.8□□□□□ -2.54
snR52snR52 PEX17P40155 199 aa-0.8□□□□□ -2.54
snR52snR52 FLX1P40464 311 aa-0.8□□□□□ -2.54
snR52snR52 SEC28P40509 296 aaKnown RBP-0.8□□□□□ -2.54
snR52snR52 COX16P47081 118 aa-0.8□□□□□ -2.54
snR52snR52 YNL217WP40152 326 aa-0.81□□□□□ -2.54
snR52snR52 POP3P53833 195 aaPredicted RBP-0.81□□□□□ -2.54
snR52snR52 SWS2P53937 143 aa-0.81□□□□□ -2.54
snR52snR52 FAR8Q05040 523 aa-0.81□□□□□ -2.54
snR52snR52 ASR1Q06834 288 aa-0.81□□□□□ -2.54
snR52snR52 MSH5Q12175 901 aa-0.81□□□□□ -2.54
snR52snR52 FMP49A0A023PZB3 126 aa-0.82□□□□□ -2.54
snR52snR52 RPL27BP0C2H7 136 aaKnown RBP-0.82□□□□□ -2.54
snR52snR52 VMA8P32610 256 aaKnown RBP-0.82□□□□□ -2.54
snR52snR52 SWC5P38326 303 aa-0.82□□□□□ -2.54
snR52snR52 YER189WP40104 122 aa-0.82□□□□□ -2.54
snR52snR52 YIA6P40556 373 aa-0.82□□□□□ -2.54
snR52snR52 CDC40P40968 455 aaPredicted RBP-0.82□□□□□ -2.54
snR52snR52 AIF1P52923 378 aa-0.82□□□□□ -2.54
snR52snR52 SXM1Q04175 944 aaKnown RBP-0.82□□□□□ -2.54
snR52snR52 SSA3P09435 649 aaKnown RBP-0.83□□□□□ -2.54
snR52snR52 GAL3P13045 520 aa-0.83□□□□□ -2.54
snR52snR52 SNA3P14359 133 aa-0.83□□□□□ -2.54
snR52snR52 RPL5P26321 297 aaKnown RBP-0.83□□□□□ -2.54
snR52snR52 VPS21P36017 210 aaKnown RBP-0.83□□□□□ -2.54
snR52snR52 RRF1P38771 230 aa-0.83□□□□□ -2.54
snR52snR52 ARO8P53090 500 aaKnown RBP-0.83□□□□□ -2.54
snR52snR52 CWC27Q02770 301 aa-0.83□□□□□ -2.54
snR52snR52 PAA1Q12447 191 aaKnown RBP-0.83□□□□□ -2.54
snR52snR52 RPP0P05317 312 aaKnown RBP-0.84□□□□□ -2.54
snR52snR52 TAL1P15019 335 aaKnown RBP-0.84□□□□□ -2.54
snR52snR52 SIP3P38717 1229 aa-0.84□□□□□ -2.54
snR52snR52 VPS45P38932 577 aa-0.84□□□□□ -2.54
snR52snR52 YRB2P40517 327 aa-0.84□□□□□ -2.54
snR52snR52 GTR2P53290 341 aa-0.84□□□□□ -2.54
snR52snR52 YBL008W-AQ3E821 79 aa-0.84□□□□□ -2.54
snR52snR52 STP22P25604 385 aa-0.85□□□□□ -2.55
snR52snR52 PRX1P34227 261 aaKnown RBP-0.85□□□□□ -2.55
snR52snR52 MSA2P36157 363 aa-0.85□□□□□ -2.55
snR52snR52 HEK2P38199 381 aaKnown RBP RIP-Chip data-0.85□□□□□ -2.55not detected
snR52snR52 RCE1Q03530 315 aa-0.85□□□□□ -2.55
snR52snR52 YLR179CQ06252 201 aaKnown RBP-0.85□□□□□ -2.55
snR52snR52 SIA1Q12212 622 aa-0.85□□□□□ -2.55
snR52snR52 TFC1P32367 649 aa-0.86□□□□□ -2.55
snR52snR52 JEN1P36035 616 aa-0.86□□□□□ -2.55
snR52snR52 GPI8P49018 411 aa-0.86□□□□□ -2.55
snR52snR52 YGL159WP53110 370 aa-0.86□□□□□ -2.55
snR52snR52 YMR111CQ04461 462 aaPredicted RBP-0.86□□□□□ -2.55
snR52snR52 POM33Q12164 279 aa-0.86□□□□□ -2.55
snR52snR52 FZO1P38297 855 aa-0.87□□□□□ -2.55
snR52snR52 APE4P38821 490 aa-0.87□□□□□ -2.55
snR52snR52 AGP3P43548 558 aa-0.87□□□□□ -2.55
snR52snR52 ERJ5P43613 295 aaPredicted RBP-0.87□□□□□ -2.55
snR52snR52 YJR056CP47115 236 aa-0.87□□□□□ -2.55
snR52snR52 SAY1P53324 424 aa-0.87□□□□□ -2.55
snR52snR52 EOS1P53938 366 aa-0.87□□□□□ -2.55
snR52snR52 SFH1Q06168 426 aa-0.87□□□□□ -2.55
snR52snR52 PRM3Q08931 133 aa-0.87□□□□□ -2.55
snR52snR52 YCT1Q12235 531 aa-0.87□□□□□ -2.55
snR52snR52 PDR18P53756 1333 aa-0.88□□□□□ -2.55
snR52snR52 EHD3P28817 500 aa-0.88□□□□□ -2.55
snR52snR52 ERG24P32462 438 aaKnown RBP-0.88□□□□□ -2.55
snR52snR52 MNN9P39107 395 aaKnown RBP-0.88□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 117.9 ms