RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W YCT1Q12235 531 aa3.07□□□□□ -1.92
VPS28YPL065W PST1Q12355 444 aa3.07□□□□□ -1.92
VPS28YPL065W GEP5Q12393 293 aa3.07□□□□□ -1.92
VPS28YPL065W YCR016WP25617 290 aaKnown RBP3.06□□□□□ -1.92
VPS28YPL065W RNP1P32385 249 aa3.06□□□□□ -1.92
VPS28YPL065W SGE1P33335 543 aa3.06□□□□□ -1.92
VPS28YPL065W YKR032WP36127 104 aa3.06□□□□□ -1.92
VPS28YPL065W GON7P46984 123 aa3.06□□□□□ -1.92
VPS28YPL065W SYF2P53277 215 aaPredicted RBP3.06□□□□□ -1.92
VPS28YPL065W YLR179CQ06252 201 aaKnown RBP3.06□□□□□ -1.92
VPS28YPL065W YOR268CQ08734 132 aa3.06□□□□□ -1.92
VPS28YPL065W SWI1P09547 1314 aa3.05□□□□□ -1.92
VPS28YPL065W PPH21P23594 369 aa3.05□□□□□ -1.92
VPS28YPL065W BFR1P38934 470 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
VPS28YPL065W LIA1P47120 325 aaKnown RBP3.05□□□□□ -1.92
VPS28YPL065W YJR079WP47126 109 aa3.05□□□□□ -1.92
VPS28YPL065W MRH4P53166 561 aa3.05□□□□□ -1.92
VPS28YPL065W RHO3Q00245 231 aaKnown RBP3.05□□□□□ -1.92
VPS28YPL065W SPG4Q04438 115 aa3.05□□□□□ -1.92
VPS28YPL065W MATALPHA1P0CY06 175 aa3.04□□□□□ -1.92
VPS28YPL065W HMLALPHA1P0CY07 175 aa3.04□□□□□ -1.92
VPS28YPL065W MSN4P33749 630 aa3.04□□□□□ -1.92
VPS28YPL065W FZO1P38297 855 aa3.04□□□□□ -1.92
VPS28YPL065W MIX17Q03667 156 aa3.04□□□□□ -1.92
VPS28YPL065W YMR114CQ04471 368 aaKnown RBP3.04□□□□□ -1.92
VPS28YPL065W RRP40Q08285 240 aaKnown RBP3.04□□□□□ -1.92
VPS28YPL065W SNU23Q12368 194 aaPredicted RBP3.04□□□□□ -1.92
VPS28YPL065W THO1P40040 218 aaKnown RBP3.03□□□□□ -1.92
VPS28YPL065W DIA1P54005 336 aa3.03□□□□□ -1.92
VPS28YPL065W GOT1Q03554 138 aa3.03□□□□□ -1.92
VPS28YPL065W KRE28Q04431 385 aa3.03□□□□□ -1.92
VPS28YPL065W YDR124WQ04608 324 aa3.03□□□□□ -1.92
VPS28YPL065W SRB4P32569 687 aa3.02□□□□□ -1.93
VPS28YPL065W MRPL39P36533 70 aa3.02□□□□□ -1.93
VPS28YPL065W MED6P38782 295 aa3.02□□□□□ -1.93
VPS28YPL065W SPT8P38915 602 aa3.02□□□□□ -1.93
VPS28YPL065W YJR141WP47172 347 aaPredicted RBP3.02□□□□□ -1.93
VPS28YPL065W SEC22P22214 214 aa3.01□□□□□ -1.93
VPS28YPL065W DRE2P36152 348 aa3.01□□□□□ -1.93
VPS28YPL065W SSH1P38353 490 aaKnown RBP3.01□□□□□ -1.93
VPS28YPL065W YHR127WP38833 243 aaKnown RBP3.01□□□□□ -1.93
VPS28YPL065W YHB1P39676 399 aaKnown RBP3.01□□□□□ -1.93
VPS28YPL065W YER085CP40058 173 aa3.01□□□□□ -1.93
VPS28YPL065W GRH1Q04410 372 aaKnown RBP3.01□□□□□ -1.93
VPS28YPL065W RDS3Q06835 107 aaPredicted RBP3.01□□□□□ -1.93
VPS28YPL065W SYC1Q08553 188 aaPredicted RBP3.01□□□□□ -1.93
VPS28YPL065W YOR186WQ08560 144 aa3.01□□□□□ -1.93
VPS28YPL065W EMP46Q12396 444 aa3.01□□□□□ -1.93
VPS28YPL065W DPM1P14020 267 aaKnown RBP3□□□□□ -1.93
VPS28YPL065W RPS5P26783 225 aaKnown RBP3□□□□□ -1.93
VPS28YPL065W YLR283WQ05867 314 aa3□□□□□ -1.93
VPS28YPL065W RPO26P20435 155 aa2.99□□□□□ -1.93
VPS28YPL065W YCR102CP25608 368 aa2.99□□□□□ -1.93
VPS28YPL065W YKL075CP36083 450 aa2.99□□□□□ -1.93
VPS28YPL065W CAB4P53332 305 aa2.99□□□□□ -1.93
VPS28YPL065W RSM10Q03201 203 aa2.99□□□□□ -1.93
VPS28YPL065W YLR126CQ12288 251 aa2.99□□□□□ -1.93
VPS28YPL065W SGA1P08019 549 aa2.98□□□□□ -1.93
VPS28YPL065W MRPL25P23369 157 aa2.98□□□□□ -1.93
VPS28YPL065W UTR5P32630 166 aa2.98□□□□□ -1.93
VPS28YPL065W RCN1P36054 211 aa2.98□□□□□ -1.93
VPS28YPL065W YER189WP40104 122 aa2.98□□□□□ -1.93
VPS28YPL065W YJR146WP47174 117 aa2.98□□□□□ -1.93
VPS28YPL065W NOP13P53883 403 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
VPS28YPL065W YNL046WP53956 172 aa2.98□□□□□ -1.93
VPS28YPL065W MSA2P36157 363 aa2.97□□□□□ -1.93
VPS28YPL065W YGP1P38616 354 aaKnown RBP2.97□□□□□ -1.93
VPS28YPL065W RNH1Q04740 348 aa2.97□□□□□ -1.93
VPS28YPL065W SEI1Q06058 285 aa2.97□□□□□ -1.93
VPS28YPL065W BBP1Q12365 385 aa2.97□□□□□ -1.93
VPS28YPL065W RTR1P40084 226 aaPredicted RBP2.96□□□□□ -1.94
VPS28YPL065W TIM11P81449 96 aaPredicted RBP2.96□□□□□ -1.94
VPS28YPL065W MSA1Q08471 629 aa2.96□□□□□ -1.94
VPS28YPL065W YPL229WQ99395 206 aa2.96□□□□□ -1.94
VPS28YPL065W RPL26AP05743 127 aaKnown RBP2.95□□□□□ -1.94
VPS28YPL065W RHO1P06780 209 aaKnown RBP2.95□□□□□ -1.94
VPS28YPL065W COG3P40094 801 aa2.95□□□□□ -1.94
VPS28YPL065W OST2P46964 130 aa2.95□□□□□ -1.94
VPS28YPL065W YJL016WP47072 561 aa2.95□□□□□ -1.94
VPS28YPL065W YGL159WP53110 370 aa2.95□□□□□ -1.94
VPS28YPL065W RPL26BP53221 127 aaKnown RBP2.95□□□□□ -1.94
VPS28YPL065W SPO77Q06134 477 aa2.95□□□□□ -1.94
VPS28YPL065W YLR462WO13556 202 aa2.94□□□□□ -1.94
VPS28YPL065W BMH2P34730 273 aaKnown RBP2.94□□□□□ -1.94
VPS28YPL065W VPS21P36017 210 aaKnown RBP2.94□□□□□ -1.94
VPS28YPL065W CUE1P38428 203 aa2.94□□□□□ -1.94
VPS28YPL065W YEL075CP39972 122 aa2.94□□□□□ -1.94
VPS28YPL065W YMR144WP40214 342 aaKnown RBP2.94□□□□□ -1.94
VPS28YPL065W DSK2P48510 373 aa2.94□□□□□ -1.94
VPS28YPL065W PEX12Q04370 399 aa2.94□□□□□ -1.94
VPS28YPL065W SUE1Q06524 206 aa2.94□□□□□ -1.94
VPS28YPL065W YLR030WQ07967 263 aa2.94□□□□□ -1.94
VPS28YPL065W VPS68Q12016 184 aa2.94□□□□□ -1.94
VPS28YPL065W SAS5Q99314 248 aa2.94□□□□□ -1.94
VPS28YPL065W ERD2P18414 219 aa2.93□□□□□ -1.94
VPS28YPL065W ERG24P32462 438 aaKnown RBP2.93□□□□□ -1.94
VPS28YPL065W TIF34P40217 347 aaKnown RBP2.93□□□□□ -1.94
VPS28YPL065W RPC17P47076 161 aa2.93□□□□□ -1.94
VPS28YPL065W TRM9P49957 279 aa2.93□□□□□ -1.94
VPS28YPL065W SLM2P53955 656 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms