RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W RFC3P38629 340 aa3.32□□□□□ -1.88
RET3YPL010W RPS20P38701 121 aaKnown RBP3.32□□□□□ -1.88
RET3YPL010W RBG1P39729 369 aa3.32□□□□□ -1.88
RET3YPL010W PHM8P40025 321 aa3.32□□□□□ -1.88
RET3YPL010W HPM1P40481 377 aa3.32□□□□□ -1.88
RET3YPL010W NAS2P40555 220 aa3.32□□□□□ -1.88
RET3YPL010W BNA1P47096 177 aa3.32□□□□□ -1.88
RET3YPL010W UFD1P53044 361 aa3.32□□□□□ -1.88
RET3YPL010W GPI1P53306 609 aa3.32□□□□□ -1.88
RET3YPL010W SPC3Q12133 184 aa3.32□□□□□ -1.88
RET3YPL010W YLR108CQ12259 485 aa3.32□□□□□ -1.88
RET3YPL010W YKL068W-AQ3E826 78 aa3.32□□□□□ -1.88
RET3YPL010W COX5BP00425 151 aa3.31□□□□□ -1.88
RET3YPL010W ILV5P06168 395 aaKnown RBP3.31□□□□□ -1.88
RET3YPL010W NAM2P11325 894 aa3.31□□□□□ -1.88
RET3YPL010W CLB4P24871 460 aa3.31□□□□□ -1.88
RET3YPL010W ACH1P32316 526 aa3.31□□□□□ -1.88
RET3YPL010W TFC1P32367 649 aa3.31□□□□□ -1.88
RET3YPL010W SDS22P36047 338 aa3.31□□□□□ -1.88
RET3YPL010W SRP102P36057 244 aaPredicted RBP3.31□□□□□ -1.88
RET3YPL010W RIB1P38066 345 aa3.31□□□□□ -1.88
RET3YPL010W PHO90P39535 881 aa3.31□□□□□ -1.88
RET3YPL010W YND1P40009 630 aa3.31□□□□□ -1.88
RET3YPL010W QRI7P43122 407 aa3.31□□□□□ -1.88
RET3YPL010W USE1P53146 245 aa3.31□□□□□ -1.88
RET3YPL010W PRP3Q03338 469 aaPredicted RBP3.31□□□□□ -1.88
RET3YPL010W RTT103Q05543 409 aa3.31□□□□□ -1.88
RET3YPL010W YPR098CQ06089 161 aa3.31□□□□□ -1.88
RET3YPL010W MRPL51Q06090 140 aaPredicted RBP3.31□□□□□ -1.88
RET3YPL010W ATG26Q06321 1198 aa3.31□□□□□ -1.88
RET3YPL010W GPI11Q06636 219 aa3.31□□□□□ -1.88
RET3YPL010W SSK1Q07084 712 aa3.31□□□□□ -1.88
RET3YPL010W RKM1Q08961 583 aaPredicted RBP3.31□□□□□ -1.88
RET3YPL010W YDL009CQ12210 107 aa3.31□□□□□ -1.88
RET3YPL010W CDC23P16522 626 aa3.3□□□□□ -1.88
RET3YPL010W SNF6P18888 332 aa3.3□□□□□ -1.88
RET3YPL010W CPR2P23285 205 aa3.3□□□□□ -1.88
RET3YPL010W MEK1P24719 497 aaPredicted RBP3.3□□□□□ -1.88
RET3YPL010W LAC1P28496 418 aa3.3□□□□□ -1.88
RET3YPL010W LTV1P34078 463 aa3.3□□□□□ -1.88
RET3YPL010W YNK1P36010 153 aaKnown RBP3.3□□□□□ -1.88
RET3YPL010W MCH2P36032 473 aa3.3□□□□□ -1.88
RET3YPL010W YBR063CP38083 404 aa3.3□□□□□ -1.88
RET3YPL010W YBR241CP38142 488 aa3.3□□□□□ -1.88
RET3YPL010W TCM62P38228 572 aaKnown RBP3.3□□□□□ -1.88
RET3YPL010W TRM5P38793 499 aa3.3□□□□□ -1.88
RET3YPL010W PSD1P39006 500 aa3.3□□□□□ -1.88
RET3YPL010W OST1P41543 476 aaKnown RBP3.3□□□□□ -1.88
RET3YPL010W STB1P42845 420 aa3.3□□□□□ -1.88
RET3YPL010W YJL016WP47072 561 aa3.3□□□□□ -1.88
RET3YPL010W UBP8P50102 471 aa3.3□□□□□ -1.88
RET3YPL010W MIG2P53035 382 aa3.3□□□□□ -1.88
RET3YPL010W GET1P53192 235 aa3.3□□□□□ -1.88
RET3YPL010W RRN9P53437 365 aa3.3□□□□□ -1.88
RET3YPL010W SUB1P54000 292 aaKnown RBP3.3□□□□□ -1.88
RET3YPL010W GTR1Q00582 310 aa3.3□□□□□ -1.88
RET3YPL010W NUP49Q02199 472 aa3.3□□□□□ -1.88
RET3YPL010W SPC19Q03954 165 aa3.3□□□□□ -1.88
RET3YPL010W BCP1Q06338 283 aa3.3□□□□□ -1.88
RET3YPL010W MLC2Q06580 163 aa3.3□□□□□ -1.88
RET3YPL010W ARR2Q06597 130 aa3.3□□□□□ -1.88
RET3YPL010W FCY22Q12119 530 aa3.3□□□□□ -1.88
RET3YPL010W OPI3P05375 206 aa3.29□□□□□ -1.88
RET3YPL010W RAD52P06778 471 aaKnown RBP3.29□□□□□ -1.88
RET3YPL010W SUA7P29055 345 aaPredicted RBP3.29□□□□□ -1.88
RET3YPL010W DEG1P31115 442 aaKnown RBP3.29□□□□□ -1.88
RET3YPL010W NTG1P31378 399 aa3.29□□□□□ -1.88
RET3YPL010W YOX1P34161 385 aa3.29□□□□□ -1.88
RET3YPL010W YKR015CP36111 568 aa3.29□□□□□ -1.88
RET3YPL010W HEK2P38199 381 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
RET3YPL010W SLM1P40485 686 aa3.29□□□□□ -1.88
RET3YPL010W CIN2P46670 268 aa3.29□□□□□ -1.88
RET3YPL010W SFH5P47008 294 aa3.29□□□□□ -1.88
RET3YPL010W NSA1P53136 463 aaPredicted RBP3.29□□□□□ -1.88
RET3YPL010W NQM1P53228 333 aaPredicted RBP3.29□□□□□ -1.88
RET3YPL010W YNL095CP53932 642 aa3.29□□□□□ -1.88
RET3YPL010W ABZ2Q03266 374 aa3.29□□□□□ -1.88
RET3YPL010W AIM36Q03798 255 aa3.29□□□□□ -1.88
RET3YPL010W POS5Q06892 414 aa3.29□□□□□ -1.88
RET3YPL010W NFI1Q12216 726 aa3.29□□□□□ -1.88
RET3YPL010W TMA17Q12513 150 aa3.29□□□□□ -1.88
RET3YPL010W YMR230W-AQ3E7B5 62 aa3.29□□□□□ -1.88
RET3YPL010W RPL42AP0CX27 106 aaKnown RBP3.28□□□□□ -1.88
RET3YPL010W RPL42BP0CX28 106 aaKnown RBP3.28□□□□□ -1.88
RET3YPL010W STE18P18852 110 aa3.28□□□□□ -1.88
RET3YPL010W TMA19P35691 167 aaKnown RBP3.28□□□□□ -1.88
RET3YPL010W FIG1P38224 298 aa3.28□□□□□ -1.88
RET3YPL010W PEX32P38292 413 aa3.28□□□□□ -1.88
RET3YPL010W FZO1P38297 855 aa3.28□□□□□ -1.88
RET3YPL010W YHR035WP38769 630 aa3.28□□□□□ -1.88
RET3YPL010W HIS6P40545 261 aa3.28□□□□□ -1.88
RET3YPL010W YNR048WP53740 393 aa3.28□□□□□ -1.88
RET3YPL010W APJ1P53940 528 aa3.28□□□□□ -1.88
RET3YPL010W THP3Q12049 470 aaKnown RBP3.28□□□□□ -1.88
RET3YPL010W ADF1Q2V2Q1 113 aa3.28□□□□□ -1.88
RET3YPL010W RPL30P14120 105 aaKnown RBP3.27□□□□□ -1.89
RET3YPL010W SSE2P32590 693 aaKnown RBP3.27□□□□□ -1.89
RET3YPL010W REC114P32841 428 aa3.27□□□□□ -1.89
RET3YPL010W SKG1P36169 355 aa3.27□□□□□ -1.89
RET3YPL010W SBE22P38814 852 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms