RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W ECM13P38195 257 aa1.8□□□□□ -2.12
SNF12YNR023W SSH1P38353 490 aaKnown RBP1.8□□□□□ -2.12
SNF12YNR023W YJR141WP47172 347 aaPredicted RBP1.8□□□□□ -2.12
SNF12YNR023W MRH4P53166 561 aa1.8□□□□□ -2.12
SNF12YNR023W SYC1Q08553 188 aaPredicted RBP1.8□□□□□ -2.12
SNF12YNR023W TY3A-GQ12173 290 aa1.8□□□□□ -2.12
SNF12YNR023W NOT5Q12514 560 aaPredicted RBP1.8□□□□□ -2.12
SNF12YNR023W YBL008W-AQ3E821 79 aa1.8□□□□□ -2.12
SNF12YNR023W TY3A-IQ99219 290 aa1.8□□□□□ -2.12
SNF12YNR023W CDC25P04821 1589 aa1.8□□□□□ -2.12
SNF12YNR023W BPT1P14772 1559 aa1.8□□□□□ -2.12
SNF12YNR023W RPA190P10964 1664 aaKnown RBP1.79□□□□□ -2.12
SNF12YNR023W THO2P53552 1597 aaKnown RBP1.79□□□□□ -2.12
SNF12YNR023W KRE1P17260 313 aa1.79□□□□□ -2.12
SNF12YNR023W GDH2P33327 1092 aaKnown RBP1.79□□□□□ -2.12
SNF12YNR023W SGE1P33335 543 aa1.79□□□□□ -2.12
SNF12YNR023W YKR032WP36127 104 aa1.79□□□□□ -2.12
SNF12YNR023W MRPL39P36533 70 aa1.79□□□□□ -2.12
SNF12YNR023W MAL32P38158 584 aa1.79□□□□□ -2.12
SNF12YNR023W GOS1P38736 223 aa1.79□□□□□ -2.12
SNF12YNR023W BFR1P38934 470 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
SNF12YNR023W YHB1P39676 399 aaKnown RBP1.79□□□□□ -2.12
SNF12YNR023W SNZ3P43545 298 aa1.79□□□□□ -2.12
SNF12YNR023W HOC1P47124 396 aa1.79□□□□□ -2.12
SNF12YNR023W YJR079WP47126 109 aa1.79□□□□□ -2.12
SNF12YNR023W SYF2P53277 215 aaPredicted RBP1.79□□□□□ -2.12
SNF12YNR023W MAL12P53341 584 aa1.79□□□□□ -2.12
SNF12YNR023W GOT1Q03554 138 aa1.79□□□□□ -2.12
SNF12YNR023W SPG4Q04438 115 aa1.79□□□□□ -2.12
SNF12YNR023W RRP40Q08285 240 aaKnown RBP1.79□□□□□ -2.12
SNF12YNR023W AGC1Q12482 902 aa1.79□□□□□ -2.12
SNF12YNR023W BUD4P47136 1447 aa1.79□□□□□ -2.12
SNF12YNR023W RPO31P04051 1460 aa1.78□□□□□ -2.12
SNF12YNR023W EHD3P28817 500 aa1.78□□□□□ -2.12
SNF12YNR023W MSN4P33749 630 aa1.78□□□□□ -2.12
SNF12YNR023W YBR096WP38256 230 aa1.78□□□□□ -2.12
SNF12YNR023W YER084WP40057 128 aa1.78□□□□□ -2.12
SNF12YNR023W YER085CP40058 173 aa1.78□□□□□ -2.12
SNF12YNR023W RHO3Q00245 231 aaKnown RBP1.78□□□□□ -2.12
SNF12YNR023W EMI1Q04406 187 aa1.78□□□□□ -2.12
SNF12YNR023W HRT1Q08273 121 aa1.78□□□□□ -2.12
SNF12YNR023W RUD3Q12234 484 aaKnown RBP1.78□□□□□ -2.12
SNF12YNR023W GEA2P39993 1459 aaKnown RBP1.78□□□□□ -2.13
SNF12YNR023W MRPL25P23369 157 aa1.77□□□□□ -2.13
SNF12YNR023W LDB7P38210 180 aa1.77□□□□□ -2.13
SNF12YNR023W JHD2P47156 728 aaPredicted RBP1.77□□□□□ -2.13
SNF12YNR023W SNZ2P53824 298 aa1.77□□□□□ -2.13
SNF12YNR023W CTF19Q02732 369 aa1.77□□□□□ -2.13
SNF12YNR023W YMR114CQ04471 368 aaKnown RBP1.77□□□□□ -2.13
SNF12YNR023W EMP46Q12396 444 aa1.77□□□□□ -2.13
SNF12YNR023W YCF1P39109 1515 aaKnown RBP1.77□□□□□ -2.13
SNF12YNR023W RAD10P06838 210 aa1.77□□□□□ -2.13
SNF12YNR023W RPO26P20435 155 aa1.77□□□□□ -2.13
SNF12YNR023W YKL075CP36083 450 aa1.77□□□□□ -2.13
SNF12YNR023W YHR127WP38833 243 aaKnown RBP1.77□□□□□ -2.13
SNF12YNR023W YER189WP40104 122 aa1.77□□□□□ -2.13
SNF12YNR023W MDM34P53083 459 aa1.77□□□□□ -2.13
SNF12YNR023W DIA1P54005 336 aa1.77□□□□□ -2.13
SNF12YNR023W MYO5Q04439 1219 aaKnown RBP1.77□□□□□ -2.13
SNF12YNR023W YOR186WQ08560 144 aa1.77□□□□□ -2.13
SNF12YNR023W YOR268CQ08734 132 aa1.77□□□□□ -2.13
SNF12YNR023W YPR011CQ12251 326 aa1.77□□□□□ -2.13
SNF12YNR023W GEP5Q12393 293 aa1.77□□□□□ -2.13
SNF12YNR023W HIR3P47171 1648 aa1.76□□□□□ -2.13
SNF12YNR023W SIN3P22579 1536 aa1.76□□□□□ -2.13
SNF12YNR023W TCP1P12612 559 aaKnown RBP1.76□□□□□ -2.13
SNF12YNR023W RPS5P26783 225 aaKnown RBP1.76□□□□□ -2.13
SNF12YNR023W CUE1P38428 203 aa1.76□□□□□ -2.13
SNF12YNR023W GCN20P43535 752 aaKnown RBP1.76□□□□□ -2.13
SNF12YNR023W CLP1Q08685 445 aaPredicted RBP1.76□□□□□ -2.13
SNF12YNR023W ESC1Q03661 1658 aaKnown RBP1.76□□□□□ -2.13
SNF12YNR023W CFT1Q06632 1357 aaKnown RBP1.75□□□□□ -2.13
SNF12YNR023W YLR462WO13556 202 aa1.75□□□□□ -2.13
SNF12YNR023W DPM1P14020 267 aaKnown RBP1.75□□□□□ -2.13
SNF12YNR023W SEC22P22214 214 aa1.75□□□□□ -2.13
SNF12YNR023W UTR5P32630 166 aa1.75□□□□□ -2.13
SNF12YNR023W COS8P38723 381 aa1.75□□□□□ -2.13
SNF12YNR023W TCD1P38756 429 aa1.75□□□□□ -2.13
SNF12YNR023W YEL075CP39972 122 aa1.75□□□□□ -2.13
SNF12YNR023W COG3P40094 801 aa1.75□□□□□ -2.13
SNF12YNR023W TIF34P40217 347 aaKnown RBP1.75□□□□□ -2.13
SNF12YNR023W PIR5P46999 287 aa1.75□□□□□ -2.13
SNF12YNR023W RPC17P47076 161 aa1.75□□□□□ -2.13
SNF12YNR023W YGL034CP53186 121 aa1.75□□□□□ -2.13
SNF12YNR023W RNH1Q04740 348 aa1.75□□□□□ -2.13
SNF12YNR023W SEI1Q06058 285 aa1.75□□□□□ -2.13
SNF12YNR023W SPO77Q06134 477 aa1.75□□□□□ -2.13
SNF12YNR023W HSL1P34244 1518 aa1.75□□□□□ -2.13
SNF12YNR023W RPL26AP05743 127 aaKnown RBP1.74□□□□□ -2.13
SNF12YNR023W SGA1P08019 549 aa1.74□□□□□ -2.13
SNF12YNR023W MATALPHA1P0CY06 175 aa1.74□□□□□ -2.13
SNF12YNR023W HMLALPHA1P0CY07 175 aa1.74□□□□□ -2.13
SNF12YNR023W RPL24BP24000 155 aaKnown RBP1.74□□□□□ -2.13
SNF12YNR023W YCR102CP25608 368 aa1.74□□□□□ -2.13
SNF12YNR023W BMH2P34730 273 aaKnown RBP1.74□□□□□ -2.13
SNF12YNR023W VPS21P36017 210 aaKnown RBP1.74□□□□□ -2.13
SNF12YNR023W YGP1P38616 354 aaKnown RBP1.74□□□□□ -2.13
SNF12YNR023W RTR1P40084 226 aaPredicted RBP1.74□□□□□ -2.13
SNF12YNR023W YMR144WP40214 342 aaKnown RBP1.74□□□□□ -2.13
SNF12YNR023W OST2P46964 130 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms