RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A FES1P38260 290 aa2.63□□□□□ -1.99
YSF3YNL138W-A RCK2P38623 610 aa2.63□□□□□ -1.99
YSF3YNL138W-A YHI9P38765 294 aa2.63□□□□□ -1.99
YSF3YNL138W-A YFL064CP43540 174 aa2.63□□□□□ -1.99
YSF3YNL138W-A SHE4P51534 789 aa2.63□□□□□ -1.99
YSF3YNL138W-A SBH2P52871 88 aa2.63□□□□□ -1.99
YSF3YNL138W-A TPC1P53257 314 aa2.63□□□□□ -1.99
YSF3YNL138W-A YNL260CP53846 198 aa2.63□□□□□ -1.99
YSF3YNL138W-A PRM15Q03262 622 aa2.63□□□□□ -1.99
YSF3YNL138W-A GOT1Q03554 138 aa2.63□□□□□ -1.99
YSF3YNL138W-A RRB1Q04225 511 aaKnown RBP2.63□□□□□ -1.99
YSF3YNL138W-A DCR2Q05924 578 aa2.63□□□□□ -1.99
YSF3YNL138W-A ARR1Q06596 294 aa2.63□□□□□ -1.99
YSF3YNL138W-A YPR202WQ08993 238 aa2.63□□□□□ -1.99
YSF3YNL138W-A YDL109CQ12103 647 aa2.63□□□□□ -1.99
YSF3YNL138W-A RUD3Q12234 484 aaKnown RBP2.63□□□□□ -1.99
YSF3YNL138W-A HMS1Q12398 434 aa2.63□□□□□ -1.99
YSF3YNL138W-A STE7P06784 515 aa2.62□□□□□ -1.99
YSF3YNL138W-A MDH2P22133 377 aa2.62□□□□□ -1.99
YSF3YNL138W-A RAD51P25454 400 aa2.62□□□□□ -1.99
YSF3YNL138W-A RPL16AP26784 199 aaKnown RBP2.62□□□□□ -1.99
YSF3YNL138W-A VMA11P32842 164 aa2.62□□□□□ -1.99
YSF3YNL138W-A ECT1P33412 323 aa2.62□□□□□ -1.99
YSF3YNL138W-A MRPL39P36533 70 aa2.62□□□□□ -1.99
YSF3YNL138W-A MRPS9P38120 278 aa2.62□□□□□ -1.99
YSF3YNL138W-A TRR2P38816 342 aa2.62□□□□□ -1.99
YSF3YNL138W-A SEC9P40357 651 aa2.62□□□□□ -1.99
YSF3YNL138W-A YHC3P47040 408 aa2.62□□□□□ -1.99
YSF3YNL138W-A APS3P47064 194 aa2.62□□□□□ -1.99
YSF3YNL138W-A TPS1Q00764 495 aaKnown RBP2.62□□□□□ -1.99
YSF3YNL138W-A SED1Q01589 338 aa2.62□□□□□ -1.99
YSF3YNL138W-A UTP6Q02354 440 aaKnown RBP2.62□□□□□ -1.99
YSF3YNL138W-A RRN5Q02983 363 aa2.62□□□□□ -1.99
YSF3YNL138W-A YDR115WQ04598 105 aa2.62□□□□□ -1.99
YSF3YNL138W-A FSH2Q05015 223 aa2.62□□□□□ -1.99
YSF3YNL138W-A MCH1Q07376 486 aa2.62□□□□□ -1.99
YSF3YNL138W-A UIP4Q08926 304 aa2.62□□□□□ -1.99
YSF3YNL138W-A ATP16Q12165 160 aa2.62□□□□□ -1.99
YSF3YNL138W-A SFM1Q12314 213 aa2.62□□□□□ -1.99
YSF3YNL138W-A YBL111CQ3E7Y5 667 aa2.62□□□□□ -1.99
YSF3YNL138W-A YGR035W-AQ45U48 73 aa2.62□□□□□ -1.99
YSF3YNL138W-A RPL23AP0CX41 137 aaKnown RBP2.61□□□□□ -1.99
YSF3YNL138W-A RPL23BP0CX42 137 aaKnown RBP2.61□□□□□ -1.99
YSF3YNL138W-A RPS16AP0CX51 143 aaKnown RBP2.61□□□□□ -1.99
YSF3YNL138W-A RPS16BP0CX52 143 aaKnown RBP2.61□□□□□ -1.99
YSF3YNL138W-A HMX1P32339 317 aa2.61□□□□□ -1.99
YSF3YNL138W-A PDC2P32896 925 aa2.61□□□□□ -1.99
YSF3YNL138W-A VAM7P32912 316 aa2.61□□□□□ -1.99
YSF3YNL138W-A RPT5P33297 434 aaKnown RBP2.61□□□□□ -1.99
YSF3YNL138W-A SUR1P33300 382 aa2.61□□□□□ -1.99
YSF3YNL138W-A EFM3P47163 339 aa2.61□□□□□ -1.99
YSF3YNL138W-A BOL2P53082 120 aa2.61□□□□□ -1.99
YSF3YNL138W-A VHT1P53241 593 aa2.61□□□□□ -1.99
YSF3YNL138W-A RPL21AQ02753 160 aaKnown RBP2.61□□□□□ -1.99
YSF3YNL138W-A CSI2Q08054 341 aa2.61□□□□□ -1.99
YSF3YNL138W-A PSF1Q12488 208 aa2.61□□□□□ -1.99
YSF3YNL138W-A RPL21BQ12672 160 aaKnown RBP2.61□□□□□ -1.99
YSF3YNL138W-A FSH3Q99369 266 aa2.61□□□□□ -1.99
YSF3YNL138W-A GCD2P12754 651 aaPredicted RBP2.6□□□□□ -1.99
YSF3YNL138W-A DBP3P20447 523 aaKnown RBP2.6□□□□□ -1.99
YSF3YNL138W-A SAG1P20840 650 aa2.6□□□□□ -1.99
YSF3YNL138W-A NTG1P31378 399 aa2.6□□□□□ -1.99
YSF3YNL138W-A PTM1P32857 523 aa2.6□□□□□ -1.99
YSF3YNL138W-A VPS51P36116 164 aa2.6□□□□□ -1.99
YSF3YNL138W-A RPC37P36121 282 aa2.6□□□□□ -1.99
YSF3YNL138W-A PET100P38958 111 aa2.6□□□□□ -1.99
YSF3YNL138W-A LCP5P40079 357 aaPredicted RBP2.6□□□□□ -1.99
YSF3YNL138W-A SCC4P40090 624 aa2.6□□□□□ -1.99
YSF3YNL138W-A APJ1P53940 528 aa2.6□□□□□ -1.99
YSF3YNL138W-A YPR172WQ06608 200 aa2.6□□□□□ -1.99
YSF3YNL138W-A APC2Q12440 853 aa2.6□□□□□ -1.99
YSF3YNL138W-A AIM45Q12480 344 aaKnown RBP2.6□□□□□ -1.99
YSF3YNL138W-A YLL053CP0CD98 152 aa2.59□□□□□ -1.99
YSF3YNL138W-A UNG1P12887 359 aa2.59□□□□□ -1.99
YSF3YNL138W-A RPO26P20435 155 aa2.59□□□□□ -1.99
YSF3YNL138W-A FAR1P21268 830 aa2.59□□□□□ -1.99
YSF3YNL138W-A LDS1P31379 325 aa2.59□□□□□ -1.99
YSF3YNL138W-A PRY2P36110 329 aa2.59□□□□□ -1.99
YSF3YNL138W-A YBR241CP38142 488 aa2.59□□□□□ -1.99
YSF3YNL138W-A BMT2P38278 337 aa2.59□□□□□ -1.99
YSF3YNL138W-A ATG7P38862 630 aa2.59□□□□□ -1.99
YSF3YNL138W-A END3P39013 349 aa2.59□□□□□ -1.99
YSF3YNL138W-A YGL114WP53134 725 aa2.59□□□□□ -1.99
YSF3YNL138W-A CDH1P53197 566 aa2.59□□□□□ -1.99
YSF3YNL138W-A RNY1Q02933 434 aaKnown RBP2.59□□□□□ -1.99
YSF3YNL138W-A YDR249CQ03787 373 aa2.59□□□□□ -1.99
YSF3YNL138W-A ECM11Q04110 302 aa2.59□□□□□ -1.99
YSF3YNL138W-A SMP3Q04174 516 aa2.59□□□□□ -1.99
YSF3YNL138W-A YDL180WQ12301 547 aa2.59□□□□□ -1.99
YSF3YNL138W-A YLR462WO13556 202 aa2.58□□□□□ -2
YSF3YNL138W-A CKI1P20485 582 aa2.58□□□□□ -2
YSF3YNL138W-A HXT2P23585 541 aa2.58□□□□□ -2
YSF3YNL138W-A PET18P25362 215 aa2.58□□□□□ -2
YSF3YNL138W-A URA10P30402 227 aa2.58□□□□□ -2
YSF3YNL138W-A ZUO1P32527 433 aaKnown RBP2.58□□□□□ -2
YSF3YNL138W-A PPQ1P32945 549 aa2.58□□□□□ -2
YSF3YNL138W-A YHL049CP38722 271 aa2.58□□□□□ -2
YSF3YNL138W-A ALP1P38971 573 aa2.58□□□□□ -2
YSF3YNL138W-A PEX22P39718 180 aa2.58□□□□□ -2
YSF3YNL138W-A YER121WP40076 114 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms