RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C GEP5Q12393 293 aa3.35□□□□□ -1.87
CTF18YMR078C YBL008W-AQ3E821 79 aa3.35□□□□□ -1.87
CTF18YMR078C RSA4P25382 515 aaKnown RBP3.34□□□□□ -1.87
CTF18YMR078C YCR016WP25617 290 aaKnown RBP3.34□□□□□ -1.87
CTF18YMR078C KRE28Q04431 385 aa3.34□□□□□ -1.87
CTF18YMR078C YKL075CP36083 450 aa3.34□□□□□ -1.88
CTF18YMR078C BFR1P38934 470 aaKnown RBP RIP-Chip data3.34□□□□□ -1.88not detected
CTF18YMR078C YER085CP40058 173 aa3.34□□□□□ -1.88
CTF18YMR078C TIM11P81449 96 aaPredicted RBP3.34□□□□□ -1.88
CTF18YMR078C YPL229WQ99395 206 aa3.34□□□□□ -1.88
CTF18YMR078C MAL32P38158 584 aa3.33□□□□□ -1.88
CTF18YMR078C SPT8P38915 602 aa3.33□□□□□ -1.88
CTF18YMR078C LIA1P47120 325 aaKnown RBP3.33□□□□□ -1.88
CTF18YMR078C CAB4P53332 305 aa3.33□□□□□ -1.88
CTF18YMR078C MAL12P53341 584 aa3.33□□□□□ -1.88
CTF18YMR078C SSU72P53538 206 aaPredicted RBP3.33□□□□□ -1.88
CTF18YMR078C MRPL50P53724 139 aa3.33□□□□□ -1.88
CTF18YMR078C RNH1Q04740 348 aa3.33□□□□□ -1.88
CTF18YMR078C CLP1Q08685 445 aaPredicted RBP3.33□□□□□ -1.88
CTF18YMR078C EMP46Q12396 444 aa3.33□□□□□ -1.88
CTF18YMR078C SWI1P09547 1314 aa3.33□□□□□ -1.88
CTF18YMR078C YER188WP40103 239 aa3.32□□□□□ -1.88
CTF18YMR078C YMR114CQ04471 368 aaKnown RBP3.32□□□□□ -1.88
CTF18YMR078C RRS1Q08746 203 aaKnown RBP3.32□□□□□ -1.88
CTF18YMR078C YCR102CP25608 368 aa3.32□□□□□ -1.88
CTF18YMR078C MSN4P33749 630 aa3.32□□□□□ -1.88
CTF18YMR078C RSM10Q03201 203 aa3.32□□□□□ -1.88
CTF18YMR078C RNP1P32385 249 aa3.31□□□□□ -1.88
CTF18YMR078C RRP40Q08285 240 aaKnown RBP3.31□□□□□ -1.88
CTF18YMR078C SYC1Q08553 188 aaPredicted RBP3.31□□□□□ -1.88
CTF18YMR078C YOR186WQ08560 144 aa3.31□□□□□ -1.88
CTF18YMR078C SGE1P33335 543 aa3.31□□□□□ -1.88
CTF18YMR078C DRE2P36152 348 aa3.31□□□□□ -1.88
CTF18YMR078C FZO1P38297 855 aa3.31□□□□□ -1.88
CTF18YMR078C GON7P46984 123 aa3.31□□□□□ -1.88
CTF18YMR078C NOP13P53883 403 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
CTF18YMR078C YDR124WQ04608 324 aa3.31□□□□□ -1.88
CTF18YMR078C YLR179CQ06252 201 aaKnown RBP3.31□□□□□ -1.88
CTF18YMR078C YPR096CO13587 100 aa3.3□□□□□ -1.88
CTF18YMR078C SGA1P08019 549 aa3.3□□□□□ -1.88
CTF18YMR078C SEC22P22214 214 aa3.3□□□□□ -1.88
CTF18YMR078C SYF2P53277 215 aaPredicted RBP3.3□□□□□ -1.88
CTF18YMR078C PST1Q12355 444 aa3.3□□□□□ -1.88
CTF18YMR078C DPM1P14020 267 aaKnown RBP3.29□□□□□ -1.88
CTF18YMR078C YHB1P39676 399 aaKnown RBP3.29□□□□□ -1.88
CTF18YMR078C YNL046WP53956 172 aa3.29□□□□□ -1.88
CTF18YMR078C RHO3Q00245 231 aaKnown RBP3.29□□□□□ -1.88
CTF18YMR078C SNU23Q12368 194 aaPredicted RBP3.29□□□□□ -1.88
CTF18YMR078C SEI1Q06058 285 aa3.29□□□□□ -1.88
CTF18YMR078C SRB4P32569 687 aa3.28□□□□□ -1.88
CTF18YMR078C RTR1P40084 226 aaPredicted RBP3.28□□□□□ -1.88
CTF18YMR078C SPO77Q06134 477 aa3.28□□□□□ -1.88
CTF18YMR078C SLD7Q08457 257 aa3.28□□□□□ -1.88
CTF18YMR078C YHR127WP38833 243 aaKnown RBP3.28□□□□□ -1.88
CTF18YMR078C RPC17P47076 161 aa3.28□□□□□ -1.88
CTF18YMR078C DIA1P54005 336 aa3.28□□□□□ -1.88
CTF18YMR078C GOT1Q03554 138 aa3.28□□□□□ -1.88
CTF18YMR078C YJR141WP47172 347 aaPredicted RBP3.27□□□□□ -1.89
CTF18YMR078C MSA1Q08471 629 aa3.27□□□□□ -1.89
CTF18YMR078C RHO1P06780 209 aaKnown RBP3.27□□□□□ -1.89
CTF18YMR078C MED6P38782 295 aa3.27□□□□□ -1.89
CTF18YMR078C YJR146WP47174 117 aa3.27□□□□□ -1.89
CTF18YMR078C YLR126CQ12288 251 aa3.27□□□□□ -1.89
CTF18YMR078C ERD2P18414 219 aa3.26□□□□□ -1.89
CTF18YMR078C YKR032WP36127 104 aa3.26□□□□□ -1.89
CTF18YMR078C MRPL39P36533 70 aa3.26□□□□□ -1.89
CTF18YMR078C YER189WP40104 122 aa3.25□□□□□ -1.89
CTF18YMR078C YJR149WP47177 404 aa3.25□□□□□ -1.89
CTF18YMR078C MIX17Q03667 156 aa3.25□□□□□ -1.89
CTF18YMR078C GRH1Q04410 372 aaKnown RBP3.25□□□□□ -1.89
CTF18YMR078C MSA2P36157 363 aa3.25□□□□□ -1.89
CTF18YMR078C OTU1P43558 301 aa3.25□□□□□ -1.89
CTF18YMR078C MRPL25P23369 157 aa3.24□□□□□ -1.89
CTF18YMR078C NTF2P33331 125 aaKnown RBP3.24□□□□□ -1.89
CTF18YMR078C VPS21P36017 210 aaKnown RBP3.24□□□□□ -1.89
CTF18YMR078C SSH1P38353 490 aaKnown RBP3.24□□□□□ -1.89
CTF18YMR078C YLR030WQ07967 263 aa3.24□□□□□ -1.89
CTF18YMR078C RPL26AP05743 127 aaKnown RBP3.24□□□□□ -1.89
CTF18YMR078C ARG80P07249 177 aa3.24□□□□□ -1.89
CTF18YMR078C COG3P40094 801 aa3.24□□□□□ -1.89
CTF18YMR078C YGL159WP53110 370 aa3.24□□□□□ -1.89
CTF18YMR078C RPL26BP53221 127 aaKnown RBP3.24□□□□□ -1.89
CTF18YMR078C YHR139C-AO13536 103 aa3.23□□□□□ -1.89
CTF18YMR078C SNA3P14359 133 aa3.23□□□□□ -1.89
CTF18YMR078C TOS8P53147 276 aa3.23□□□□□ -1.89
CTF18YMR078C DCR2Q05924 578 aa3.23□□□□□ -1.89
CTF18YMR078C VPS68Q12016 184 aa3.23□□□□□ -1.89
CTF18YMR078C YLR462WO13556 202 aa3.23□□□□□ -1.89
CTF18YMR078C BMH2P34730 273 aaKnown RBP3.23□□□□□ -1.89
CTF18YMR078C RCN1P36054 211 aa3.23□□□□□ -1.89
CTF18YMR078C RTC3P38804 111 aaPredicted RBP3.23□□□□□ -1.89
CTF18YMR078C YEL075CP39972 122 aa3.23□□□□□ -1.89
CTF18YMR078C YPR172WQ06608 200 aa3.23□□□□□ -1.89
CTF18YMR078C RDS3Q06835 107 aaPredicted RBP3.23□□□□□ -1.89
CTF18YMR078C URA8P38627 578 aaPredicted RBP3.22□□□□□ -1.89
CTF18YMR078C TIF34P40217 347 aaKnown RBP3.22□□□□□ -1.89
CTF18YMR078C YJL016WP47072 561 aa3.22□□□□□ -1.89
CTF18YMR078C TRM9P49957 279 aa3.22□□□□□ -1.89
CTF18YMR078C PEX12Q04370 399 aa3.22□□□□□ -1.89
CTF18YMR078C MSS2P40990 351 aa3.21□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms