RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W BPH1P25356 2167 aa0.04□□□□□ -2.4
PRP39YML046W COX2P00410 251 aa0.04□□□□□ -2.4
PRP39YML046W INH1P01097 85 aa0.04□□□□□ -2.4
PRP39YML046W SGA1P08019 549 aa0.04□□□□□ -2.4
PRP39YML046W YKR104WP0CE69 306 aa0.04□□□□□ -2.4
PRP39YML046W NSP1P14907 823 aaKnown RBP0.04□□□□□ -2.4
PRP39YML046W FRS2P15625 503 aaKnown RBP0.04□□□□□ -2.4
PRP39YML046W DDR48P18899 430 aaKnown RBP0.04□□□□□ -2.4
PRP39YML046W ANB1P19211 157 aa0.04□□□□□ -2.4
PRP39YML046W VMA11P32842 164 aa0.04□□□□□ -2.4
PRP39YML046W MBA1P38300 278 aa0.04□□□□□ -2.4
PRP39YML046W ATG7P38862 630 aa0.04□□□□□ -2.4
PRP39YML046W MRPL49P40858 161 aaPredicted RBP0.04□□□□□ -2.4
PRP39YML046W COG7P53195 279 aa0.04□□□□□ -2.4
PRP39YML046W RSC1P53236 928 aa0.04□□□□□ -2.4
PRP39YML046W NUP49Q02199 472 aa0.04□□□□□ -2.4
PRP39YML046W AIM33Q04516 312 aa0.04□□□□□ -2.4
PRP39YML046W MRX9Q07349 420 aaKnown RBP0.04□□□□□ -2.4
PRP39YML046W YOL019WQ08157 551 aa0.04□□□□□ -2.4
PRP39YML046W FAS1P07149 2051 aaKnown RBP0.04□□□□□ -2.4
PRP39YML046W KSS1P14681 368 aa0.03□□□□□ -2.4
PRP39YML046W VPH2P32341 215 aa0.03□□□□□ -2.4
PRP39YML046W CAT2P32796 670 aaKnown RBP0.03□□□□□ -2.4
PRP39YML046W YNL200CP40165 246 aaKnown RBP0.03□□□□□ -2.4
PRP39YML046W PEP8P40335 379 aa0.03□□□□□ -2.4
PRP39YML046W UTP25P40498 721 aaKnown RBP0.03□□□□□ -2.4
PRP39YML046W SYS1P41544 203 aa0.03□□□□□ -2.4
PRP39YML046W RPA43P46669 326 aa0.03□□□□□ -2.4
PRP39YML046W MND1P53102 219 aa0.03□□□□□ -2.4
PRP39YML046W ALG11P53954 548 aaKnown RBP0.03□□□□□ -2.4
PRP39YML046W CDC14Q00684 551 aa0.03□□□□□ -2.4
PRP39YML046W CAB5Q03941 241 aa0.03□□□□□ -2.4
PRP39YML046W YPR078CQ06813 372 aa0.03□□□□□ -2.4
PRP39YML046W ATG10Q07879 167 aa0.03□□□□□ -2.4
PRP39YML046W SCM3Q12334 223 aa0.03□□□□□ -2.4
PRP39YML046W SFG1Q12507 346 aa0.03□□□□□ -2.4
PRP39YML046W RPS16AP0CX51 143 aaKnown RBP0.03□□□□□ -2.41
PRP39YML046W RPS16BP0CX52 143 aaKnown RBP0.03□□□□□ -2.41
PRP39YML046W GCG1P32656 232 aaKnown RBP0.03□□□□□ -2.41
PRP39YML046W LCP5P40079 357 aaPredicted RBP0.03□□□□□ -2.41
PRP39YML046W YGL114WP53134 725 aa0.03□□□□□ -2.41
PRP39YML046W CAB4P53332 305 aa0.03□□□□□ -2.41
PRP39YML046W YNR066CP53752 436 aa0.03□□□□□ -2.41
PRP39YML046W CWC21Q03375 135 aaKnown RBP0.03□□□□□ -2.41
PRP39YML046W YMR310CQ04867 317 aaPredicted RBP0.03□□□□□ -2.41
PRP39YML046W CTS2Q06350 511 aa0.03□□□□□ -2.41
PRP39YML046W RPN5Q12250 445 aaKnown RBP0.03□□□□□ -2.41
PRP39YML046W PRM4Q12498 284 aa0.03□□□□□ -2.41
PRP39YML046W LAG2Q92325 660 aa0.03□□□□□ -2.41
PRP39YML046W Q0144Q9ZZW2 109 aa0.03□□□□□ -2.41
PRP39YML046W STE3P06783 470 aa0.02□□□□□ -2.41
PRP39YML046W APA2P22108 325 aa0.02□□□□□ -2.41
PRP39YML046W RPL16BP26785 198 aaKnown RBP0.02□□□□□ -2.41
PRP39YML046W MEI4P29467 408 aa0.02□□□□□ -2.41
PRP39YML046W CLG1P35190 452 aa0.02□□□□□ -2.41
PRP39YML046W SIF2P38262 535 aa0.02□□□□□ -2.41
PRP39YML046W YBR220CP38318 560 aa0.02□□□□□ -2.41
PRP39YML046W YHI9P38765 294 aa0.02□□□□□ -2.41
PRP39YML046W TRM5P38793 499 aa0.02□□□□□ -2.41
PRP39YML046W VPS45P38932 577 aa0.02□□□□□ -2.41
PRP39YML046W YJL118WP47022 219 aa0.02□□□□□ -2.41
PRP39YML046W CCC1P47818 322 aa0.02□□□□□ -2.41
PRP39YML046W NBP35P52920 328 aa0.02□□□□□ -2.41
PRP39YML046W LSB1P53281 241 aa0.02□□□□□ -2.41
PRP39YML046W RHO3Q00245 231 aaKnown RBP0.02□□□□□ -2.41
PRP39YML046W AGC1Q12482 902 aa0.02□□□□□ -2.41
PRP39YML046W YAL063C-AQ3E791 96 aa0.02□□□□□ -2.41
PRP39YML046W MDM35O60200 86 aa0.01□□□□□ -2.41
PRP39YML046W HSP82P02829 709 aaKnown RBP0.01□□□□□ -2.41
PRP39YML046W YFR010W-AP0C5N0 62 aa0.01□□□□□ -2.41
PRP39YML046W HYP2P23301 157 aaKnown RBP0.01□□□□□ -2.41
PRP39YML046W PUP2P32379 260 aa0.01□□□□□ -2.41
PRP39YML046W RIB1P38066 345 aa0.01□□□□□ -2.41
PRP39YML046W MRX3P38172 270 aa0.01□□□□□ -2.41
PRP39YML046W SSH1P38353 490 aaKnown RBP0.01□□□□□ -2.41
PRP39YML046W YER121WP40076 114 aa0.01□□□□□ -2.41
PRP39YML046W COG3P40094 801 aa0.01□□□□□ -2.41
PRP39YML046W SEC13Q04491 297 aaKnown RBP0.01□□□□□ -2.41
PRP39YML046W PER33Q12144 273 aa0.01□□□□□ -2.41
PRP39YML046W CAR2P07991 424 aaKnown RBP0.01□□□□□ -2.41
PRP39YML046W PUT1P09368 476 aa0.01□□□□□ -2.41
PRP39YML046W YER188C-AP0C0V2 99 aa0.01□□□□□ -2.41
PRP39YML046W ERD1P16151 362 aa0.01□□□□□ -2.41
PRP39YML046W CKI1P20485 582 aa0.01□□□□□ -2.41
PRP39YML046W FAA1P30624 700 aaKnown RBP0.01□□□□□ -2.41
PRP39YML046W MEI5P32489 222 aa0.01□□□□□ -2.41
PRP39YML046W DOA4P32571 926 aa0.01□□□□□ -2.41
PRP39YML046W AVT2P39981 480 aa0.01□□□□□ -2.41
PRP39YML046W RFC4P40339 323 aaKnown RBP0.01□□□□□ -2.41
PRP39YML046W AGP3P43548 558 aa0.01□□□□□ -2.41
PRP39YML046W YJL016WP47072 561 aa0.01□□□□□ -2.41
PRP39YML046W PRP24P49960 444 aaKnown RBP0.01□□□□□ -2.41
PRP39YML046W NOP13P53883 403 aaKnown RBP RIP-Chip data0.01□□□□□ -2.41not detected
PRP39YML046W MRS2Q01926 470 aa0.01□□□□□ -2.41
PRP39YML046W TVP15Q03860 143 aa0.01□□□□□ -2.41
PRP39YML046W YOR292CQ08743 309 aa0.01□□□□□ -2.41
PRP39YML046W GPM2Q12008 311 aa0.01□□□□□ -2.41
PRP39YML046W YOR029WQ12243 111 aa0.01□□□□□ -2.41
PRP39YML046W GPM3Q12326 303 aa0.01□□□□□ -2.41
PRP39YML046W JLP1Q12358 412 aa0.01□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 97.1 ms